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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Knobloch syndrome microcornea-myopic chorioretinal atrophy
1 gene
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1 of 1 corroborated by 2+ sources
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 113 →
Acro-dermo-ungual-lacrimal-tooth syndrome Post-operative stroke
1 gene
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1 of 1 corroborated by 2+ sources
TP63(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 27 →
Waardenburg syndrome type 2 Waardenburg-shah syndrome
1 gene
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1 of 1 corroborated by 2+ sources
MITF(3)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 229 →
Waardenburg syndrome type 4A Waardenburg-shah syndrome
1 gene
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1 of 1 corroborated by 2+ sources
EDNRB(3)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. —
Waardenburg syndrome type 4B Waardenburg-shah syndrome
1 gene
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1 of 1 corroborated by 2+ sources
EDN3(3)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 229 →
Waardenburg syndrome type 4C Waardenburg-shah syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SOX10(3)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. —
Denys drash syndrome Wagr syndrome
1 gene
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1 of 1 corroborated by 2+ sources
WT1(6)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 35 →
Drash syndrome Wagr syndrome
1 gene
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1 of 1 corroborated by 2+ sources
WT1(4)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 35 →
Waardenburg-shah syndrome Yemenite deaf-blind hypopigmentation syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SOX10(3)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. —
14q11.2 microduplication syndrome Chromodomain helicase dna binding protein 8 overgrowth syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CHD8(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 279 →
Acne inversa Pash syndrome
1 gene
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1 of 1 corroborated by 2+ sources
NCSTN(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 116 →
Brown tendon sheath syndrome Whispering dysphonia
1 gene
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1 of 1 corroborated by 2+ sources
TUBB4A(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Brown tendon sheath syndrome TUBB4A-related neurologic disorder
1 gene
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1 of 1 corroborated by 2+ sources
TUBB4A(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Brown tendon sheath syndrome Osteolysis, hereditary, of carpal bones with or without nephropathy
1 gene
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MAFB(1)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Chudley-mccullough syndrome Neonatal anemia
1 gene
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1 of 1 corroborated by 2+ sources
SPTB(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 400 →
Chudley-mccullough syndrome Perinatal hemolytic anemia
1 gene
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SPTB(1)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 400 →
Clonal cytopenia of undetermined significance Tatton-Brown-Rahman overgrowth syndrome
1 gene
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1 of 1 corroborated by 2+ sources
DNMT3A(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 268 →
Vitamin d deficiency Worth syndrome
1 gene
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1 of 1 corroborated by 2+ sources
LRP5(3)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 98 →
Camurati-engelmann syndrome Worth syndrome
1 gene
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1 of 1 corroborated by 2+ sources
LRP5(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 98 →
Chromodomain helicase dna binding protein 8 overgrowth syndrome Intellectual developmental disorder autism dysmorphic
1 gene
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1 of 1 corroborated by 2+ sources
CHD8(4)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 279 →
Congenital aniridia Denys drash syndrome
1 gene
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1 of 1 corroborated by 2+ sources
WT1(7)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 35 →
Congenital aniridia Drash syndrome
1 gene
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WT1(1)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 35 →
Denys drash syndrome Desmoplastic small round cell tumor
1 gene
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1 of 1 corroborated by 2+ sources
WT1(6)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 35 →
Desmoplastic small round cell tumor Drash syndrome
1 gene
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1 of 1 corroborated by 2+ sources
WT1(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 35 →
Osteopetrosis and infantile neuroaxonal dystrophy Worth syndrome
1 gene
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1 of 1 corroborated by 2+ sources
LRP5(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 98 →

Showing 25 of 202 matching pairs, sorted by significance (descending). Click a column header to sort.