Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Osteoglophonic dysplasia Trigonocephaly
1 gene
Show details
1 of 1 corroborated by 2+ sources
FGFR1(7)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 185 →
Osteolysis, hereditary multicentric Torg-winchester syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
MMP2(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Osteoma cutis Primary bilateral macronodular adrenal hyperplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
GNAS(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 409 →
palatal anomalies-widely spaced teeth-facial dysmorphism-developmental delay syndrome Primary bilateral macronodular adrenal hyperplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
KDM1A(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 409 →
Palmoplantar keratoderma and congenital alopecia Perniola krajewska carnevale syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
LSS(3)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 362 →
pancreatic agenesis 1 Partial pancreatic agenesis
1 gene
Show details
1 of 1 corroborated by 2+ sources
PDX1(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Pancreatic beta-cell agenesis with neonatal diabetes mellitus Partial pancreatic agenesis
1 gene
Show details
PTF1A(1)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Papillorenal syndrome Renal cysts and diabetes syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
PAX2(3)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Parkinsonism-dystonia SLC6A3-related dopamine transporter deficiency syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC6A3(5)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 392 →
Partial agenesis of corpus callosum Preaxial polydactyly with upper back hypertrichosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
SHH(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 232 →
Partial agenesis of corpus callosum Skeletal system disorder
1 gene
Show details
SHH(1)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 232 →
Peptic esophagitis Vitamin d deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
VDR(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Periportal fibrosis Ventricular hypertrophy
1 gene
Show details
PKHD1(1)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 157 →
Ankylosis Pfeiffer syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
FGFR2(8)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 85 →
Beare-stevenson cutis gyrata syndrome Pfeiffer syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
FGFR2(8)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 85 →
Cutis gyrata syndrome Pfeiffer syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
FGFR2(8)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 85 →
Polycythemia, primary familial and congenital SH2B3-related immune system disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
SH2B3(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Microvascular angina Portal vein thrombosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
MTHFR(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 204 →
homocystinuria due to methylene tetrahydrofolate reductase deficiency Portal vein thrombosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
MTHFR(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 204 →
Postaxial polydactyly–anterior pituitary anomalies–facial dysmorphism syndrome White sutton syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
GLI2(4)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Potocki-shaffer syndrome Seizures, scoliosis, and macrocephaly/microcephaly syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
EXT2(5)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 93 →
Preaxial polydactyly with upper back hypertrichosis Skeletal system disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
SHH(3)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Erythromelalgia Primary erythromelalgia
1 gene
Show details
1 of 1 corroborated by 2+ sources
SCN9A(6)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 164 →
Arthropathy progressive pseudorheumatoid arthropathy of childhood
1 gene
Show details
1 of 1 corroborated by 2+ sources
CCN6(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 24 →
PTEN hamartoma tumor syndrome Retinal vasculopathy with cerebral leukodystrophy
1 gene
Show details
1 of 1 corroborated by 2+ sources
PTEN(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.