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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Digestive system neoplasms myoglobinuria, acute recurrent, autosomal recessive
1 gene
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1 of 1 corroborated by 2+ sources
LPIN1(2)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
Direct inguinal hernia Ruptured abdominal aortic aneurysm
1 gene
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TGFBR2(1)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
Direct inguinal hernia Ruptured aortic aneurysm
1 gene
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TGFBR2(1)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
Direct inguinal hernia Ruptured thoracic aortic aneurysm
1 gene
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TGFBR2(1)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
Direct inguinal hernia Thoracoabdominal aortic aneurysm
1 gene
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TGFBR2(1)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
Distal anoctaminopathy Rhabdomyolysis
1 gene
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1 of 1 corroborated by 2+ sources
ANO5(2)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. Cluster 290 →
Dkc1-related disorder Hoyeraal hreidarsson syndrome
1 gene
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1 of 1 corroborated by 2+ sources
DKC1(5)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. Cluster 64 →
Double outlet right ventricle Interrupted aortic arch
1 gene
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NKX2-5(1)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
Double outlet right ventricle NKX2.5-related congenital, conduction and myopathic heart disease
1 gene
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1 of 1 corroborated by 2+ sources
NKX2-5(2)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
duane retraction syndrome 2 Robinow syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CHN1(2)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. Cluster 127 →
dyskeratosis congenita and related telomere biology disorder Telomere-related pulmonary fibrosis and/or bone marrow failure
1 gene
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1 of 1 corroborated by 2+ sources
RPA1(5)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. Cluster 64 →
dyskeratosis congenita, autosomal dominant 3 Hoyeraal hreidarsson syndrome
1 gene
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1 of 1 corroborated by 2+ sources
TINF2(3)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
dyskeratosis congenita, x-linked Hoyeraal hreidarsson syndrome
1 gene
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1 of 1 corroborated by 2+ sources
DKC1(5)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. Cluster 64 →
dysosteosclerosis Osteosclerosis
1 gene
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1 of 1 corroborated by 2+ sources
TCIRG1(2)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
Early-onset progressive encephalopathy-spastic ataxia-distal spinal muscular atrophy syndrome Osteosclerosis
1 gene
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1 of 1 corroborated by 2+ sources
TBCE(3)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. Cluster 108 →
EGLN1-related erythrocytosis and pheochromocytoma/paraganglioma predisposition Secondary polycythemia
1 gene
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1 of 1 corroborated by 2+ sources
EGLN1(4)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
Eiken skeletal dysplasia Metaphyseal chondrodysplasia
1 gene
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1 of 1 corroborated by 2+ sources
PTH1R(6)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
encephalopathy, progressive, with amyotrophy and optic atrophy Osteosclerosis
1 gene
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1 of 1 corroborated by 2+ sources
TBCE(3)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. Cluster 108 →
Capillary malformation-arteriovenous malformation EPHB4-associated vascular malformation spectrum
1 gene
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1 of 1 corroborated by 2+ sources
EPHB4(6)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
Central hypothyroidism Congenital nystagmus
1 gene
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ROBO1(1)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
Charcot-Marie-Tooth disease type 4B3 Charcot-marie-tooth disease, x-linked
1 gene
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1 of 1 corroborated by 2+ sources
SBF1(2)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. Cluster 15 →
Childhood-onset sensorineural hearing impairment Xx gonadal dysgenesis syndrome
1 gene
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PRORP(1)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. Cluster 336 →
Cholesterol ester storage disease Niemann-pick disease
1 gene
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1 of 1 corroborated by 2+ sources
LIPA(5)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
Choroid diseases Occupational dermatitis
1 gene
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1 of 1 corroborated by 2+ sources
IL10(2)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
Choroid diseases Mucositis
1 gene
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1 of 1 corroborated by 2+ sources
IL10(2)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.