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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
immunodeficiency 76 Myocardial infarction
1 gene
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1 of 1 corroborated by 2+ sources
FCHO1(2)
0.002 1.000 3.77e-2 3.95e-2 ✓ sig. —
Congenital right-sided heart lesions Myocardial infarction
1 gene
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SLC27A6(1)
0.002 1.000 3.77e-2 3.95e-2 ✓ sig. —
Beta-ureidopropionase deficiency Myocardial infarction
1 gene
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1 of 1 corroborated by 2+ sources
UPB1(7)
0.002 1.000 3.77e-2 3.95e-2 ✓ sig. —
Bloom syndrome Colorectal neoplasms
1 gene
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1 of 1 corroborated by 2+ sources
UNG(2)
0.003 0.500 3.74e-2 3.93e-2 ✓ sig. —
Childhood kidney wilms tumor Colorectal neoplasms
1 gene
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1 of 1 corroborated by 2+ sources
TRIM28(2)
0.003 0.500 3.74e-2 3.93e-2 ✓ sig. —
C syndrome Multiple sclerosis
1 gene
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1 of 1 corroborated by 2+ sources
CD96(6)
0.002 1.000 3.74e-2 3.93e-2 ✓ sig. —
Multiple sclerosis X-linked epilepsy with or without intellectual disability and dysmorphic features
1 gene
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1 of 1 corroborated by 2+ sources
GABRA3(4)
0.002 1.000 3.74e-2 3.93e-2 ✓ sig. —
Multiple sclerosis Ziegler-huang syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SLC30A7(2)
0.002 1.000 3.74e-2 3.93e-2 ✓ sig. —
congenital disorder of glycosylation with defective fucosylation 1 Multiple sclerosis
1 gene
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1 of 1 corroborated by 2+ sources
FUT8(2)
0.002 1.000 3.74e-2 3.93e-2 ✓ sig. —
Baralle-macken syndrome Multiple sclerosis
1 gene
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1 of 1 corroborated by 2+ sources
COPB1(4)
0.002 1.000 3.74e-2 3.93e-2 ✓ sig. —
Multiple sclerosis RFT1-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
RFT1(2)
0.002 1.000 3.74e-2 3.93e-2 ✓ sig. —
Multiple sclerosis seizures, early-onset, with neurodegeneration and brain calcifications
1 gene
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1 of 1 corroborated by 2+ sources
NRROS(2)
0.002 1.000 3.74e-2 3.93e-2 ✓ sig. —
Multiple sclerosis Telangiectasia–intellectual disability–microcephaly–metaphyseal dysplasia–eye abnormalities–short stature syndrome
1 gene
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1 of 1 corroborated by 2+ sources
LRRC8C(4)
0.002 1.000 3.74e-2 3.93e-2 ✓ sig. —
Apolipoprotein c-ii deficiency Multiple sclerosis
1 gene
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1 of 1 corroborated by 2+ sources
APOC2(5)
0.002 1.000 3.74e-2 3.93e-2 ✓ sig. —
Multiple sclerosis NIK deficiency
1 gene
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1 of 1 corroborated by 2+ sources
MAP3K14(2)
0.002 1.000 3.74e-2 3.93e-2 ✓ sig. —
immunodeficiency 106, susceptibility to viral infections Multiple sclerosis
1 gene
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1 of 1 corroborated by 2+ sources
IFNAR1(2)
0.002 1.000 3.74e-2 3.93e-2 ✓ sig. —
inflammatory bowel disease 25 Multiple sclerosis
1 gene
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1 of 1 corroborated by 2+ sources
IL10RB(2)
0.002 1.000 3.74e-2 3.93e-2 ✓ sig. —
Multiple sclerosis RCBTB1-related retinopathy
1 gene
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1 of 1 corroborated by 2+ sources
RCBTB1(2)
0.002 1.000 3.74e-2 3.93e-2 ✓ sig. —
leukodystrophy, hypomyelinating, 22 Multiple sclerosis
1 gene
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1 of 1 corroborated by 2+ sources
CLDN11(3)
0.002 1.000 3.74e-2 3.93e-2 ✓ sig. —
LZTFL1-related ciliopathy Multiple sclerosis
1 gene
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1 of 1 corroborated by 2+ sources
LZTFL1(2)
0.002 1.000 3.74e-2 3.93e-2 ✓ sig. —
Desbuquois syndrome lethal occipital encephalocele-skeletal dysplasia syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CYP26B1(2)
0.002 1.000 3.68e-2 3.87e-2 ✓ sig. —
Desbuquois syndrome lethal osteosclerotic bone dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
FAM20C(2)
0.002 1.000 3.68e-2 3.87e-2 ✓ sig. —
Desbuquois syndrome liberfarb syndrome
1 gene
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1 of 1 corroborated by 2+ sources
PISD(2)
0.002 1.000 3.68e-2 3.87e-2 ✓ sig. —
Desbuquois syndrome Majeed syndrome
1 gene
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1 of 1 corroborated by 2+ sources
LPIN2(6)
0.002 1.000 3.68e-2 3.87e-2 ✓ sig. —
Desbuquois syndrome MEGF8-related Carpenter syndrome
1 gene
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1 of 1 corroborated by 2+ sources
MEGF8(2)
0.002 1.000 3.68e-2 3.87e-2 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.