Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
frontotemporal dementia and/or amyotrophic lateral sclerosis 5 Frontotemporal dementia with or without amyotrophic lateral sclerosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
CCNF(5)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 102 →
frontotemporal dementia and/or amyotrophic lateral sclerosis 7 Frontotemporal dementia with or without amyotrophic lateral sclerosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
CHMP2B(5)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 102 →
frontotemporal dementia and/or amyotrophic lateral sclerosis 8 Frontotemporal dementia with or without amyotrophic lateral sclerosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
CYLD(5)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Frontotemporal dementia with or without amyotrophic lateral sclerosis inclusion body myopathy with Paget disease of bone and frontotemporal dementia
1 gene
Show details
1 of 1 corroborated by 2+ sources
VCP(6)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 102 →
Galloway-mowat syndrome nephrotic syndrome, type 18
1 gene
Show details
1 of 1 corroborated by 2+ sources
NUP133(7)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 30 →
generalized epilepsy-paroxysmal dyskinesia syndrome Idiopathic generalized epilepsy
1 gene
Show details
1 of 1 corroborated by 2+ sources
KCNMA1(2)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Coronary thrombosis Glycoprotein vi deficiency
1 gene
Show details
GP6(1)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Glycosylphosphatidylinositol biosynthesis defect sulfite oxidase deficiency due to molybdenum cofactor deficiency type C
1 gene
Show details
1 of 1 corroborated by 2+ sources
GPHN(2)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Glycosylphosphatidylinositol biosynthesis defect glycosylphosphatidylinositol biosynthesis defect 21
1 gene
Show details
1 of 1 corroborated by 2+ sources
PIGU(3)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 413 →
Glycosylphosphatidylinositol biosynthesis defect glycosylphosphatidylinositol biosynthesis defect 17
1 gene
Show details
1 of 1 corroborated by 2+ sources
PIGH(4)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 413 →
Glycosylphosphatidylinositol biosynthesis defect glycosylphosphatidylinositol biosynthesis defect 18
1 gene
Show details
1 of 1 corroborated by 2+ sources
PIGS(3)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 413 →
Glycosylphosphatidylinositol biosynthesis defect glycosylphosphatidylinositol biosynthesis defect 15
1 gene
Show details
1 of 1 corroborated by 2+ sources
GPAA1(4)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 413 →
Congenital stationary night blindness GPR179-related retinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
GPR179(4)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 151 →
Congenital stationary night blindness GRM6-related retinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
GRM6(4)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 151 →
Groenouw corneal dystrophy Hereditary corneal dystrophy
1 gene
Show details
1 of 1 corroborated by 2+ sources
TGFBI(3)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Congenital stationary night blindness RHO-related retinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
RHO(4)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Hypophosphatemic rickets Rickets, x-linked hypophosphatemic
1 gene
Show details
1 of 1 corroborated by 2+ sources
PHEX(3)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
familial thoracic aortic aneurysm and aortic dissection Rienhoff syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
TGFB3(3)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Rothmund-thomson syndrome Rothmund-Thomson syndrome type 1
1 gene
Show details
1 of 1 corroborated by 2+ sources
ANAPC1(6)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 80 →
Fetal akinesia deformation sequence Schaaf-yang syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
MAGEL2(5)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Atrioventricular septal defect schimke immuno-osseous dysplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 60 →
Majewski syndrome short-rib thoracic dysplasia 7 with or without polydactyly
1 gene
Show details
1 of 1 corroborated by 2+ sources
WDR35(2)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 22 →
Microcephalic dwarfism Specific learning disability
1 gene
Show details
1 of 1 corroborated by 2+ sources
DNMT3A(2)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 268 →
heyn-sproul-jackson syndrome Specific learning disability
1 gene
Show details
1 of 1 corroborated by 2+ sources
DNMT3A(2)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 268 →
Specific learning disability Tatton-Brown-Rahman overgrowth syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
DNMT3A(2)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 268 →

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.