Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Cyp2d6 deficiency Tremor
1 gene
Show details
1 of 1 corroborated by 2+ sources
CYP2D6(2)
0.063 1.000 9.74e-4 1.67e-3 ✓ sig. Cluster 13 →
Cystitis systemic lupus erythematosus, susceptibility to, 1
1 gene
Show details
1 of 1 corroborated by 2+ sources
TLR5(2)
0.063 1.000 9.74e-4 1.67e-3 ✓ sig. —
Delpire-mcneill syndrome Uterine prolapse
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC12A2(5)
0.063 1.000 9.74e-4 1.67e-3 ✓ sig. —
Bmp4-related ocular growth disorder Cleft lip and palate
1 gene
Show details
1 of 1 corroborated by 2+ sources
BMP4(3)
0.063 1.000 9.74e-4 1.67e-3 ✓ sig. —
BRCA1-related cancer predisposition Hereditary breast and ovarian cancer syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
BRCA1(5)
0.063 1.000 9.74e-4 1.67e-3 ✓ sig. —
Cancer, alopecia, pigment dyscrasia, onychodystrophy, and keratoderma Rotator cuff tear
1 gene
Show details
1 of 1 corroborated by 2+ sources
SASH1(4)
0.063 1.000 9.74e-4 1.67e-3 ✓ sig. —
Hereditary breast and ovarian cancer syndrome PALB2-related cancer predisposition
1 gene
Show details
1 of 1 corroborated by 2+ sources
PALB2(2)
0.063 1.000 9.74e-4 1.67e-3 ✓ sig. —
Gastro-entero-pancreatic neuroendocrine tumor pancytopenia due to IKZF1 mutations
1 gene
Show details
1 of 1 corroborated by 2+ sources
IKZF1(2)
0.063 1.000 9.74e-4 1.67e-3 ✓ sig. —
PLA2G6-associated neurodegeneration Uterine prolapse
1 gene
Show details
1 of 1 corroborated by 2+ sources
PLA2G6(2)
0.063 1.000 9.74e-4 1.67e-3 ✓ sig. —
Portal hypertension renal tubular dysgenesis of genetic origin
1 gene
Show details
1 of 1 corroborated by 2+ sources
REN(2)
0.063 1.000 9.74e-4 1.67e-3 ✓ sig. —
Arginine vasopressin deficiency Portal hypertension
1 gene
Show details
1 of 1 corroborated by 2+ sources
AVP(2)
0.063 1.000 9.74e-4 1.67e-3 ✓ sig. —
Colobomatous microphthalmia progressive retinal dystrophy due to retinol transport defect
1 gene
Show details
1 of 1 corroborated by 2+ sources
RBP4(2)
0.063 1.000 9.74e-4 1.67e-3 ✓ sig. —
Hereditary breast and ovarian cancer syndrome RAD51C-related cancer predisposition
1 gene
Show details
1 of 1 corroborated by 2+ sources
RAD51C(3)
0.063 1.000 9.74e-4 1.67e-3 ✓ sig. —
Hereditary breast and ovarian cancer syndrome RAD51D-related cancer predisposition
1 gene
Show details
1 of 1 corroborated by 2+ sources
RAD51D(3)
0.063 1.000 9.74e-4 1.67e-3 ✓ sig. Cluster 132 →
Renal agenesis Testicular regression syndrome
1 gene
Show details
DHX37(1)
0.063 1.000 9.74e-4 1.67e-3 ✓ sig. —
Developmental delay with ataxia, hypotonia, and facial dysmorphism Mobius syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
EBF3(2)
0.063 1.000 9.74e-4 1.67e-3 ✓ sig. —
Disabling pansclerotic morphea of childhood Systemic scleroderma
1 gene
Show details
1 of 1 corroborated by 2+ sources
STAT4(4)
0.063 1.000 9.74e-4 1.67e-3 ✓ sig. —
Dna2-related mitochondrial dna deletion syndrome Mitochondrial myopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
DNA2(2)
0.063 1.000 9.74e-4 1.67e-3 ✓ sig. —
duane retraction syndrome 2 Mobius syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
CHN1(2)
0.063 1.000 9.74e-4 1.67e-3 ✓ sig. —
Dyschromatosis Rotator cuff tear
1 gene
Show details
1 of 1 corroborated by 2+ sources
SASH1(2)
0.063 1.000 9.74e-4 1.67e-3 ✓ sig. —
Early-onset combined immunodeficiency with low ig due to dominant-negative ikaros mutation Gastro-entero-pancreatic neuroendocrine tumor
1 gene
Show details
1 of 1 corroborated by 2+ sources
IKZF1(2)
0.063 1.000 9.74e-4 1.67e-3 ✓ sig. —
enhanced s-cone syndrome inherited retinal dystrophy
1 gene
Show details
NR2E3(1)
0.063 1.000 9.74e-4 1.67e-3 ✓ sig. —
Colobomatous microphthalmia colobomatous microphthalmia-rhizomelic dysplasia syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
MAB21L2(4)
0.063 1.000 9.74e-4 1.67e-3 ✓ sig. Cluster 56 →
Colorectal adenomatous polyposis Congenital pontocerebellar hypoplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
MUTYH(2)
0.063 1.000 9.74e-4 1.67e-3 ✓ sig. —
combined immunodeficiency due to RELA haploinsufficiency Cystitis
1 gene
Show details
1 of 1 corroborated by 2+ sources
RELA(3)
0.063 1.000 9.74e-4 1.67e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.