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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Dyslipidemias dysosteosclerosis
1 gene
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1 of 1 corroborated by 2+ sources
TCIRG1(4)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Clinodactyly Dystrophinopathy
1 gene
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DMD(1)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Chorea Early-onset spastic ataxia-myoclonic epilepsy-neuropathy syndrome
1 gene
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1 of 1 corroborated by 2+ sources
AFG3L2(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Epidermolysa bullosa simplex and limb girdle muscular dystrophy Junctional epidermolysis bullosa
1 gene
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1 of 1 corroborated by 2+ sources
PLEC(4)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Epidermolysis bullosa simplex Junctional epidermolysis bullosa
1 gene
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1 of 1 corroborated by 2+ sources
KRT14(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
epidermolysis bullosa, junctional 7, with interstitial lung disease and nephrotic syndrome Junctional epidermolysis bullosa
1 gene
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1 of 1 corroborated by 2+ sources
ITGA3(7)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Atrioventricular block dilated cardiomyopathy 1HH
1 gene
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1 of 1 corroborated by 2+ sources
BAG3(2)
0.056 1.000 1.10e-3 1.83e-3 ✓ sig. Cluster 4 →
Atrioventricular block dilated cardiomyopathy 1I
1 gene
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1 of 1 corroborated by 2+ sources
DES(2)
0.056 1.000 1.10e-3 1.83e-3 ✓ sig. Cluster 4 →
Donohue syndrome Toxic nodular goiter
1 gene
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1 of 1 corroborated by 2+ sources
INSR(7)
0.056 1.000 1.10e-3 1.83e-3 ✓ sig. —
Congenital neutropenia Dursun syndrome
1 gene
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1 of 1 corroborated by 2+ sources
G6PC3(2)
0.056 1.000 1.10e-3 1.83e-3 ✓ sig. —
dysosteosclerosis Osteopetrosis
1 gene
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1 of 1 corroborated by 2+ sources
TCIRG1(8)
0.056 1.000 1.10e-3 1.83e-3 ✓ sig. —
Congenital neutropenia dysosteosclerosis
1 gene
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1 of 1 corroborated by 2+ sources
TCIRG1(2)
0.056 1.000 1.10e-3 1.83e-3 ✓ sig. —
ectodermal dysplasia and immunodeficiency 2 Hodgkin disease
1 gene
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1 of 1 corroborated by 2+ sources
NFKBIA(2)
0.056 1.000 1.10e-3 1.83e-3 ✓ sig. —
EEM syndrome Hypotrichosis
1 gene
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1 of 1 corroborated by 2+ sources
CDH3(2)
0.056 1.000 1.10e-3 1.83e-3 ✓ sig. —
Cutaneous mastocytosis EGLN1-related erythrocytosis and pheochromocytoma/paraganglioma predisposition
1 gene
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1 of 1 corroborated by 2+ sources
EGLN1(2)
0.056 1.000 1.10e-3 1.83e-3 ✓ sig. —
ehlers-danlos syndrome, spondylodysplastic type, 1 Larsen syndrome
1 gene
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1 of 1 corroborated by 2+ sources
B4GALT7(2)
0.056 1.000 1.10e-3 1.83e-3 ✓ sig. Cluster 68 →
Chondrodysplasia Eiken skeletal dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
PTH1R(6)
0.056 1.000 1.10e-3 1.83e-3 ✓ sig. —
Atrioventricular block Retractile testis
1 gene
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1 of 1 corroborated by 2+ sources
GNAI2(2)
0.056 1.000 1.10e-3 1.83e-3 ✓ sig. —
Micrognathism Right aortic arch
1 gene
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BLTP1(1)
0.056 1.000 1.10e-3 1.83e-3 ✓ sig. —
Gaucher disease Riley-day syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ELP1(3)
0.056 1.000 1.10e-3 1.83e-3 ✓ sig. —
Micrognathism Satb2 associated syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SATB2(3)
0.056 1.000 1.10e-3 1.83e-3 ✓ sig. —
Congenital neutropenia SEC61A1 deficiency
1 gene
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1 of 1 corroborated by 2+ sources
SEC61A1(2)
0.056 1.000 1.10e-3 1.83e-3 ✓ sig. —
Cutaneous mastocytosis short-rib thoracic dysplasia 8 with or without polydactyly
1 gene
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1 of 1 corroborated by 2+ sources
DYNC2I1(2)
0.056 1.000 1.10e-3 1.83e-3 ✓ sig. —
Larsen syndrome skeletal dysplasia, mild, with joint laxity and advanced bone age
1 gene
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1 of 1 corroborated by 2+ sources
0.056 1.000 1.10e-3 1.83e-3 ✓ sig. Cluster 68 →
Coffin-siris syndrome SOX11-related complex neurodevelopmental disorder with or without congenital anomalies
1 gene
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1 of 1 corroborated by 2+ sources
SOX11(5)
0.056 1.000 1.10e-3 1.83e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.