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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Blepharophimosis intellectual disability syndrome Insomnia
1 gene
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1 of 1 corroborated by 2+ sources
UBE3B(2)
0.001 1.000 7.01e-2 7.14e-2 —
C3hex olfactory ability Insomnia
1 gene
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1 of 1 corroborated by 2+ sources
OR2J3(2)
0.001 1.000 7.01e-2 7.14e-2 —
COG5-congenital disorder of glycosylation Insomnia
1 gene
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1 of 1 corroborated by 2+ sources
COG5(2)
0.001 1.000 7.01e-2 7.14e-2 —
glutaryl-CoA dehydrogenase deficiency Insomnia
1 gene
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1 of 1 corroborated by 2+ sources
GCDH(2)
0.001 1.000 7.01e-2 7.14e-2 —
fanconi anemia complementation group e Insomnia
1 gene
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1 of 1 corroborated by 2+ sources
FANCE(2)
0.001 1.000 7.01e-2 7.14e-2 —
immunodeficiency 23 Insomnia
1 gene
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1 of 1 corroborated by 2+ sources
PGM3(2)
0.001 1.000 7.01e-2 7.14e-2 —
Developmental delay with dysmorphic facies and brain anomalies Insomnia
1 gene
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1 of 1 corroborated by 2+ sources
U2AF2(5)
0.001 1.000 7.01e-2 7.14e-2 —
Congenital myelofibrosis with anemia Insomnia
1 gene
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1 of 1 corroborated by 2+ sources
RBSN(3)
0.001 1.000 7.01e-2 7.14e-2 —
Craniolenticulosutural dysplasia Insomnia
1 gene
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1 of 1 corroborated by 2+ sources
SEC23A(6)
0.001 1.000 7.01e-2 7.14e-2 Cluster 2 →
Benign familial pemphigus Insomnia
1 gene
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1 of 1 corroborated by 2+ sources
ATP2C1(2)
0.001 1.000 7.01e-2 7.14e-2 —
BBS1-related ciliopathy Insomnia
1 gene
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1 of 1 corroborated by 2+ sources
BBS1(2)
0.001 1.000 7.01e-2 7.14e-2 —
Autoinflammatory disease, systemic, with vasculitis Insomnia
1 gene
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1 of 1 corroborated by 2+ sources
LYN(4)
0.001 1.000 7.01e-2 7.14e-2 —
Autoinflammation with pulmonary and cutaneous vasculitis Insomnia
1 gene
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1 of 1 corroborated by 2+ sources
HCK(4)
0.001 1.000 7.01e-2 7.14e-2 —
Asthma Catifa syndrome
1 gene
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1 of 1 corroborated by 2+ sources
RIC1(5)
0.001 1.000 6.94e-2 7.08e-2 —
Asthma Cleft palate proliferative retinopathy developmental delay
1 gene
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1 of 1 corroborated by 2+ sources
LRRC32(4)
0.001 1.000 6.94e-2 7.08e-2 —
Asthma Charcot-Marie-Tooth disease, axonal, type 2FF
1 gene
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1 of 1 corroborated by 2+ sources
CADM3(2)
0.001 1.000 6.94e-2 7.08e-2 —
Asthma Mineralocortocoid excess
1 gene
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1 of 1 corroborated by 2+ sources
HSD11B2(7)
0.001 1.000 6.94e-2 7.08e-2 —
Asthma Udp-glucose-hexose-1-phosphate uridylyltransferase
1 gene
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1 of 1 corroborated by 2+ sources
GALT(2)
0.001 1.000 6.94e-2 7.08e-2 —
Asthma seizures, early-onset, with neurodegeneration and brain calcifications
1 gene
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1 of 1 corroborated by 2+ sources
NRROS(2)
0.001 1.000 6.94e-2 7.08e-2 —
Asthma SEC61B-related polycystic liver disease
1 gene
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1 of 1 corroborated by 2+ sources
SEC61B(2)
0.001 1.000 6.94e-2 7.08e-2 —
Asthma Sarcosinemia
1 gene
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1 of 1 corroborated by 2+ sources
SARDH(7)
0.001 1.000 6.94e-2 7.08e-2 —
Asthma Rothmund-Thomson syndrome type 1
1 gene
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1 of 1 corroborated by 2+ sources
ANAPC1(2)
0.001 1.000 6.94e-2 7.08e-2 —
Asthma Diaphanospondylodysostosis
1 gene
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1 of 1 corroborated by 2+ sources
BMPER(6)
0.001 1.000 6.94e-2 7.08e-2 —
Breast cancer Midline facial cleft
1 gene
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1 of 1 corroborated by 2+ sources
PCSK7(2)
0.001 1.000 6.92e-2 7.06e-2 —
BBS2-related ciliopathy Breast cancer
1 gene
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1 of 1 corroborated by 2+ sources
BBS2(2)
0.001 1.000 6.92e-2 7.06e-2 —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.