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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Autoinflammatory disease, systemic, with vasculitis Hypertension
1 gene
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1 of 1 corroborated by 2+ sources
LYN(4)
0.001 1.000 7.46e-2 7.59e-2 —
Congenital arthrogryposis with anterior horn cell disease Hypertension
1 gene
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1 of 1 corroborated by 2+ sources
GLE1(3)
0.001 1.000 7.46e-2 7.59e-2 —
fanconi anemia complementation group l Hypertension
1 gene
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1 of 1 corroborated by 2+ sources
FANCL(2)
0.001 1.000 7.46e-2 7.59e-2 —
Hypertension renal hypomagnesemia 2
1 gene
Show details
1 of 1 corroborated by 2+ sources
FXYD2(3)
0.001 1.000 7.46e-2 7.59e-2 —
Hypertension Wernicke encephalopathy
1 gene
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1 of 1 corroborated by 2+ sources
TKT(3)
0.001 1.000 7.46e-2 7.59e-2 —
Hypertension Urocanate hydratase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
UROC1(8)
0.001 1.000 7.46e-2 7.59e-2 —
Hypertension opsismodysplasia
1 gene
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1 of 1 corroborated by 2+ sources
INPPL1(3)
0.001 1.000 7.46e-2 7.59e-2 —
Coronary artery disease Oculocerebrofacial syndrome
1 gene
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1 of 1 corroborated by 2+ sources
UBE3B(4)
0.001 1.000 7.42e-2 7.55e-2 —
Coronary artery disease macular corneal dystrophy
1 gene
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1 of 1 corroborated by 2+ sources
CHST6(2)
0.001 1.000 7.42e-2 7.55e-2 —
Blepharophimosis intellectual disability syndrome Coronary artery disease
1 gene
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1 of 1 corroborated by 2+ sources
UBE3B(2)
0.001 1.000 7.42e-2 7.55e-2 —
Coronary artery disease hemochromatosis type 2A
1 gene
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1 of 1 corroborated by 2+ sources
HJV(2)
0.001 1.000 7.42e-2 7.55e-2 —
Coronary artery disease polycystic liver disease 2
1 gene
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1 of 1 corroborated by 2+ sources
SEC63(2)
0.001 1.000 7.42e-2 7.55e-2 —
Coronary artery disease ectodermal dysplasia 12, hypohidrotic/hair/tooth/nail type
1 gene
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1 of 1 corroborated by 2+ sources
KDF1(2)
0.001 1.000 7.42e-2 7.55e-2 —
Coronary artery disease Intellectual developmental disorder growth metabolic
1 gene
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1 of 1 corroborated by 2+ sources
DIP2B(3)
0.001 1.000 7.42e-2 7.55e-2 Cluster 78 →
Coronary artery disease immunodeficiency 126, susceptibility to
1 gene
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1 of 1 corroborated by 2+ sources
PTCRA(2)
0.001 1.000 7.42e-2 7.55e-2 —
Coronary artery disease VPS11-related neurological disorder
1 gene
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1 of 1 corroborated by 2+ sources
VPS11(2)
0.001 1.000 7.42e-2 7.55e-2 —
Coronary artery disease Thrombocytopenia with anemia and myelofibrosis
1 gene
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1 of 1 corroborated by 2+ sources
MPIG6B(6)
0.001 1.000 7.42e-2 7.55e-2 —
Coronary artery disease TMEM165-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
TMEM165(2)
0.001 1.000 7.42e-2 7.55e-2 —
Coronary artery disease tooth agenesis, selective, 9
1 gene
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1 of 1 corroborated by 2+ sources
GREM2(2)
0.001 1.000 7.42e-2 7.55e-2 —
Barth syndrome Coronary artery disease
1 gene
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1 of 1 corroborated by 2+ sources
0.001 1.000 7.42e-2 7.55e-2 —
band heterotopia of brain Coronary artery disease
1 gene
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1 of 1 corroborated by 2+ sources
EML1(2)
0.001 1.000 7.42e-2 7.55e-2 Cluster 78 →
Coronary artery disease Cytosolic acetoacetyl-coa thiolase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
ACAT2(2)
0.001 1.000 7.42e-2 7.55e-2 —
Coronary artery disease Genetic transient congenital hypothyroidism
1 gene
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1 of 1 corroborated by 2+ sources
DUOX2(3)
0.001 1.000 7.42e-2 7.55e-2 —
Myocardial infarction Periventricular leukomalacia
1 gene
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1 of 1 corroborated by 2+ sources
PLEKHG1(2)
0.002 0.500 7.39e-2 7.53e-2 —
Burn-mckeown syndrome Desbuquois syndrome
1 gene
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1 of 1 corroborated by 2+ sources
POLR1A(3)
0.002 0.500 7.23e-2 7.36e-2 —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.