Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Cryptospermia Hydrocephalus
1 gene
Show details
TRIM71(1)
0.033 0.250 6.74e-3 8.02e-3 ✓ sig. Cluster 293 →
Female infertility macrothrombocytopenia-lymphedema-developmental delay-facial dysmorphism-camptodactyly syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
CDC42(2)
0.010 1.000 6.69e-3 7.96e-3 ✓ sig. —
Female infertility radioulnar synostosis with amegakaryocytic thrombocytopenia 1
1 gene
Show details
1 of 1 corroborated by 2+ sources
HOXA11(3)
0.010 1.000 6.69e-3 7.96e-3 ✓ sig. —
combined immunodeficiency due to LRBA deficiency Female infertility
1 gene
Show details
1 of 1 corroborated by 2+ sources
LRBA(2)
0.010 1.000 6.69e-3 7.96e-3 ✓ sig. —
Congenital hypogonadotropic hypogonadism Female infertility
1 gene
Show details
1 of 1 corroborated by 2+ sources
EMX2(2)
0.010 1.000 6.69e-3 7.96e-3 ✓ sig. —
Female infertility Uterine bilocularis
1 gene
Show details
1 of 1 corroborated by 2+ sources
HOXA13(2)
0.010 1.000 6.69e-3 7.96e-3 ✓ sig. —
Female infertility immunodeficiency-centromeric instability-facial anomalies syndrome 1
1 gene
Show details
1 of 1 corroborated by 2+ sources
DNMT3B(2)
0.010 1.000 6.69e-3 7.96e-3 ✓ sig. —
Female infertility Isolated follicle-stimulating hormone deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
FSHB(2)
0.010 1.000 6.69e-3 7.96e-3 ✓ sig. —
Female infertility hand-foot-genital syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
HOXA13(3)
0.010 1.000 6.69e-3 7.96e-3 ✓ sig. —
Female infertility NR2F2 related multiple congenital anomalies/dysmorphic syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
NR2F2(2)
0.010 1.000 6.69e-3 7.96e-3 ✓ sig. —
Anovulation Female infertility
1 gene
Show details
1 of 1 corroborated by 2+ sources
NR5A2(2)
0.010 1.000 6.69e-3 7.96e-3 ✓ sig. —
Charcot-Marie-Tooth disease, demyelinating, type 1J Long qt syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
ITPR3(2)
0.010 1.000 6.62e-3 7.89e-3 ✓ sig. —
familial isolated arrhythmogenic right ventricular dysplasia Long qt syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
DSC2(2)
0.010 1.000 6.62e-3 7.89e-3 ✓ sig. Cluster 4 →
leukodystrophy, hypomyelinating, 14 Long qt syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
UFM1(2)
0.010 1.000 6.62e-3 7.89e-3 ✓ sig. —
dilated cardiomyopathy 1CC Long qt syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
NEXN(2)
0.010 1.000 6.62e-3 7.89e-3 ✓ sig. Cluster 4 →
dilated cardiomyopathy 1W Long qt syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
VCL(2)
0.010 1.000 6.62e-3 7.89e-3 ✓ sig. —
Cohen syndrome Long qt syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
VPS13B(7)
0.010 1.000 6.62e-3 7.89e-3 ✓ sig. —
immunodeficiency 97 with autoinflammation Long qt syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
PIK3CG(2)
0.010 1.000 6.62e-3 7.89e-3 ✓ sig. —
Intellectual developmental disorder seizures dysmorphic gait Long qt syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
WDR26(2)
0.010 1.000 6.62e-3 7.89e-3 ✓ sig. —
15q13.3 microdeletion syndrome Memory disorders
1 gene
Show details
1 of 1 corroborated by 2+ sources
CHRNA7(5)
0.019 0.500 6.61e-3 7.88e-3 ✓ sig. —
Marinesco-sjogren syndrome Strabismus
1 gene
Show details
1 of 1 corroborated by 2+ sources
SIL1(6)
0.027 0.333 6.61e-3 7.88e-3 ✓ sig. —
Parenchymal hematoma Prion disease
1 gene
Show details
SEMA3A(1)
0.043 0.167 6.61e-3 7.87e-3 ✓ sig. —
Hereditary spastic paraplegia Paraparesis
1 gene
Show details
1 of 1 corroborated by 2+ sources
TECPR2(2)
0.010 1.000 6.56e-3 7.82e-3 ✓ sig. —
Lung disease primary ciliary dyskinesia 29
1 gene
Show details
1 of 1 corroborated by 2+ sources
CCNO(3)
0.010 1.000 6.56e-3 7.82e-3 ✓ sig. —
Lung disease lung disease, immunodeficiency, and chromosome breakage syndrome;
1 gene
Show details
1 of 1 corroborated by 2+ sources
NSMCE3(5)
0.010 1.000 6.56e-3 7.82e-3 ✓ sig. Cluster 119 →

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.