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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Congenital insufficiency of mitral valve Tetralogy of fallot
1 gene
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1 of 1 corroborated by 2+ sources
LMCD1(2)
0.009 1.000 7.40e-3 8.70e-3 ✓ sig. —
Cerebellar ataxia neurodegeneration, childhood-onset, with cerebellar ataxia and cognitive decline
1 gene
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1 of 1 corroborated by 2+ sources
CAPRIN1(2)
0.009 1.000 7.40e-3 8.70e-3 ✓ sig. —
Cerebellar ataxia neurodevelopmental disorder with language impairment, autism, and attention deficit-hyperactivity disorder
1 gene
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1 of 1 corroborated by 2+ sources
CAPRIN1(2)
0.009 1.000 7.40e-3 8.70e-3 ✓ sig. —
Nonobstructive azoospermia Spermatogenic failure
1 gene
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1 of 1 corroborated by 2+ sources
SLC26A8(5)
0.009 1.000 7.40e-3 8.70e-3 ✓ sig. —
NR2F2 related multiple congenital anomalies/dysmorphic syndrome Tetralogy of fallot
1 gene
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1 of 1 corroborated by 2+ sources
NR2F2(2)
0.009 1.000 7.40e-3 8.70e-3 ✓ sig. —
Ovarian teratoma Premature ovarian failure
1 gene
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1 of 1 corroborated by 2+ sources
BMP15(2)
0.009 1.000 7.40e-3 8.70e-3 ✓ sig. —
arrhythmogenic cardiomyopathy with variable ectodermal abnormalities Tetralogy of fallot
1 gene
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1 of 1 corroborated by 2+ sources
0.009 1.000 7.40e-3 8.70e-3 ✓ sig. —
autosomal dominant cerebellar ataxia Cerebellar ataxia
1 gene
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1 of 1 corroborated by 2+ sources
NPTX1(3)
0.009 1.000 7.40e-3 8.70e-3 ✓ sig. —
autosomal recessive cerebellar ataxia Cerebellar ataxia
1 gene
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1 of 1 corroborated by 2+ sources
CWF19L1(4)
0.009 1.000 7.40e-3 8.70e-3 ✓ sig. Cluster 79 →
autosomal recessive spinocerebellar ataxia 10 Cerebellar ataxia
1 gene
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1 of 1 corroborated by 2+ sources
ANO10(2)
0.009 1.000 7.40e-3 8.70e-3 ✓ sig. —
autosomal recessive spinocerebellar ataxia 14 Cerebellar ataxia
1 gene
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1 of 1 corroborated by 2+ sources
SPTBN2(2)
0.009 1.000 7.40e-3 8.70e-3 ✓ sig. —
autosomal recessive spinocerebellar ataxia 20 Cerebellar ataxia
1 gene
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1 of 1 corroborated by 2+ sources
SNX14(3)
0.009 1.000 7.40e-3 8.70e-3 ✓ sig. —
Anovulation Premature ovarian failure
1 gene
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1 of 1 corroborated by 2+ sources
NR5A2(2)
0.009 1.000 7.40e-3 8.70e-3 ✓ sig. —
Amish nemaline myopathy Myopathy
1 gene
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1 of 1 corroborated by 2+ sources
TNNT1(2)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Myopathy TOR1AIP1-related myopathy
1 gene
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1 of 1 corroborated by 2+ sources
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Eosinophilia xeroderma pigmentosum variant type
1 gene
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1 of 1 corroborated by 2+ sources
POLH(2)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
MEGF10-related myopathy Myopathy
1 gene
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1 of 1 corroborated by 2+ sources
MEGF10(2)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Multisystem disorder Myopathy
1 gene
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1 of 1 corroborated by 2+ sources
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Eosinophilia fontaine progeroid syndrome
1 gene
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1 of 1 corroborated by 2+ sources
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. Cluster 16 →
glycogen storage disease V Myopathy
1 gene
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1 of 1 corroborated by 2+ sources
PYGM(2)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Eosinophilia Sialidosis
1 gene
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1 of 1 corroborated by 2+ sources
NEU1(6)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
congenital myasthenic syndrome 12 Myopathy
1 gene
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1 of 1 corroborated by 2+ sources
GFPT1(2)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Congenital sialidosis Eosinophilia
1 gene
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1 of 1 corroborated by 2+ sources
NEU1(3)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Cranio-cervical dystonia Eosinophilia
1 gene
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1 of 1 corroborated by 2+ sources
ANO3(3)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Eosinophilia holocarboxylase synthetase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
HLCS(2)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.