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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Autonomic nervous system disease Inflammatory skin disease
1 gene
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ELMO1(1)
0.013 0.500 9.85e-3 1.12e-2 ✓ sig. —
Inflammatory skin disease Neutral lipid storage disease with ichthyosis
1 gene
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1 of 1 corroborated by 2+ sources
ABHD5(3)
0.013 0.500 9.85e-3 1.12e-2 ✓ sig. —
Brody myopathy Hypogonadism
1 gene
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1 of 1 corroborated by 2+ sources
ATP2A1(7)
0.013 0.500 9.85e-3 1.12e-2 ✓ sig. Cluster 54 →
Intellectual developmental disorder dysmorphic microcephaly Intellectual disability
1 gene
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1 of 1 corroborated by 2+ sources
COPB1(2)
0.013 0.500 9.85e-3 1.12e-2 ✓ sig. —
Complex regional pain syndrome Secondary malignant neoplasm
1 gene
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KIF2B(1)
0.037 0.125 9.83e-3 1.12e-2 ✓ sig. —
Mouth disease Pernicious anemia
1 gene
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MARCHF1(1)
0.037 0.125 9.83e-3 1.12e-2 ✓ sig. —
Neuroblastoma Parenti-mignot neurodevelopmental syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CHD5(5)
0.007 1.000 9.81e-3 1.11e-2 ✓ sig. —
Neuroblastoma spondyloepimetaphyseal dysplasia with joint laxity, type 3
1 gene
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1 of 1 corroborated by 2+ sources
EXOC6B(2)
0.007 1.000 9.81e-3 1.11e-2 ✓ sig. —
Colobomatous macrophthalmia microcornea syndrome Neuroblastoma
1 gene
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1 of 1 corroborated by 2+ sources
CRIM1(2)
0.007 1.000 9.81e-3 1.11e-2 ✓ sig. Cluster 5 →
HAND2 related congenital heart defect Neuroblastoma
1 gene
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1 of 1 corroborated by 2+ sources
HAND2(2)
0.007 1.000 9.81e-3 1.11e-2 ✓ sig. —
Hereditary arterial and articular multiple calcification syndrome Neuroblastoma
1 gene
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1 of 1 corroborated by 2+ sources
NT5E(4)
0.007 1.000 9.81e-3 1.11e-2 ✓ sig. —
BARD1-related cancer predisposition Neuroblastoma
1 gene
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1 of 1 corroborated by 2+ sources
BARD1(3)
0.007 1.000 9.81e-3 1.11e-2 ✓ sig. —
Ataxia with intention tremor and hypotonia Myeloid leukemia
1 gene
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1 of 1 corroborated by 2+ sources
POU4F1(4)
0.007 1.000 9.74e-3 1.11e-2 ✓ sig. —
b-cell immunodeficiency, distal limb anomalies, and urogenital malformations Myeloid leukemia
1 gene
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1 of 1 corroborated by 2+ sources
TOP2B(2)
0.007 1.000 9.74e-3 1.11e-2 ✓ sig. —
Myeloid leukemia thrombocytopenia 2
1 gene
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1 of 1 corroborated by 2+ sources
ANKRD26(2)
0.007 1.000 9.74e-3 1.11e-2 ✓ sig. —
lessel-kreienkamp syndrome Myeloid leukemia
1 gene
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1 of 1 corroborated by 2+ sources
AGO2(2)
0.007 1.000 9.74e-3 1.11e-2 ✓ sig. —
leukoencephalopathy, diffuse hereditary, with spheroids 1 Myeloid leukemia
1 gene
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1 of 1 corroborated by 2+ sources
CSF1R(2)
0.007 1.000 9.74e-3 1.11e-2 ✓ sig. —
immunodeficiency 64 Myeloid leukemia
1 gene
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1 of 1 corroborated by 2+ sources
RASGRP1(2)
0.007 1.000 9.74e-3 1.11e-2 ✓ sig. —
Aplasia and myelodysplasia Myeloid leukemia
1 gene
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1 of 1 corroborated by 2+ sources
SRP72(4)
0.007 1.000 9.74e-3 1.11e-2 ✓ sig. —
Early-onset calcifying leukoencephalopathy-skeletal dysplasia Myeloid leukemia
1 gene
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1 of 1 corroborated by 2+ sources
CSF1R(4)
0.007 1.000 9.74e-3 1.11e-2 ✓ sig. —
hypotaurinemic retinal degeneration and cardiomyopathy Myeloid leukemia
1 gene
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1 of 1 corroborated by 2+ sources
SLC6A6(2)
0.007 1.000 9.74e-3 1.11e-2 ✓ sig. Cluster 53 →
Brain abnormalities neurodegeneration dysosteosclerosis Myeloid leukemia
1 gene
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1 of 1 corroborated by 2+ sources
CSF1R(6)
0.007 1.000 9.74e-3 1.11e-2 ✓ sig. —
Myeloid leukemia Neutrophilic leukemia
1 gene
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CSF3R(1)
0.007 1.000 9.74e-3 1.11e-2 ✓ sig. —
17q24.2 microdeletion syndrome Contact dermatitis
1 gene
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1 of 1 corroborated by 2+ sources
PSMD12(3)
0.013 0.500 9.72e-3 1.10e-2 ✓ sig. —
Contact dermatitis Degenerative polyarthritis
1 gene
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1 of 1 corroborated by 2+ sources
TLR8(2)
0.013 0.500 9.72e-3 1.10e-2 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.