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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a13 Rheumatoid arthritis
1 gene
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1 of 1 corroborated by 2+ sources
B3GNT2(4)
0.002 0.500 8.35e-2 8.45e-2 —
Breast neoplasms Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a13
1 gene
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1 of 1 corroborated by 2+ sources
B4GAT1(3)
0.002 0.500 6.68e-2 6.81e-2 —
Gout Muscular dystrophy-dystroglycanopathy (congenital with impaired intellectual development), type b15
1 gene
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1 of 1 corroborated by 2+ sources
DPM3(2)
0.001 1.000 5.28e-2 5.43e-2 —
Cardiomyopathy Muscular dystrophy-dystroglycanopathy (congenital with impaired intellectual development), type b15
1 gene
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1 of 1 corroborated by 2+ sources
DPM3(2)
0.004 1.000 1.63e-2 1.77e-2 ✓ sig. —
Graves disease Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a13
1 gene
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1 of 1 corroborated by 2+ sources
B3GNT2(3)
0.010 0.500 1.29e-2 1.42e-2 ✓ sig. —
Muscular dystrophy-dystroglycanopathy (congenital with impaired intellectual development), type b15 Myopathy
1 gene
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1 of 1 corroborated by 2+ sources
DPM3(2)
0.008 1.000 7.75e-3 8.87e-3 ✓ sig. Cluster 140 →
Congenital disorder of glycosylation Muscular dystrophy-dystroglycanopathy (congenital with impaired intellectual development), type b15
1 gene
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1 of 1 corroborated by 2+ sources
DPM3(5)
0.010 1.000 6.46e-3 7.56e-3 ✓ sig. —
Limb-girdle muscular dystrophy Muscular dystrophy-dystroglycanopathy (congenital with impaired intellectual development), type b15
1 gene
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DPM3(1)
0.023 1.000 2.71e-3 3.48e-3 ✓ sig. Cluster 140 →
Limb-girdle muscular dystrophy Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a8
1 gene
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POMGNT2(1)
0.023 1.000 2.71e-3 3.48e-3 ✓ sig. —
Limb-girdle muscular dystrophy Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a9
1 gene
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1 of 1 corroborated by 2+ sources
DAG1(3)
0.023 1.000 2.71e-3 3.48e-3 ✓ sig. —
Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a13 Walker-warburg syndrome
1 gene
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1 of 1 corroborated by 2+ sources
B4GAT1(5)
0.056 0.500 2.07e-3 2.79e-3 ✓ sig. Cluster 366 →
Muscle eye brain disease Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a13
1 gene
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1 of 1 corroborated by 2+ sources
B4GAT1(3)
0.059 0.500 1.94e-3 2.65e-3 ✓ sig. Cluster 366 →
Congenital muscular dystrophy Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a12
1 gene
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1 of 1 corroborated by 2+ sources
POMK(3)
0.042 1.000 1.49e-3 2.12e-3 ✓ sig. —
Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a12 Walker-warburg syndrome
1 gene
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1 of 1 corroborated by 2+ sources
POMK(4)
0.059 1.000 1.03e-3 1.57e-3 ✓ sig. —
Muscular dystrophy-dystroglycanopathy (congenital with impaired intellectual development), type b6 Walker-warburg syndrome
1 gene
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1 of 1 corroborated by 2+ sources
LARGE1(4)
0.059 1.000 1.03e-3 1.57e-3 ✓ sig. —
Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a10 Walker-warburg syndrome
1 gene
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1 of 1 corroborated by 2+ sources
RXYLT1(4)
0.059 1.000 1.03e-3 1.57e-3 ✓ sig. —
Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a4 Walker-warburg syndrome
1 gene
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1 of 1 corroborated by 2+ sources
FKTN(4)
0.059 1.000 1.03e-3 1.57e-3 ✓ sig. —
Muscular dystrophy-dystroglycanopathy (congenital with impaired intellectual development), type b3 Walker-warburg syndrome
1 gene
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1 of 1 corroborated by 2+ sources
POMGNT1(4)
0.059 1.000 1.03e-3 1.57e-3 ✓ sig. —
Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a2 Walker-warburg syndrome
1 gene
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1 of 1 corroborated by 2+ sources
POMT2(4)
0.059 1.000 1.03e-3 1.57e-3 ✓ sig. —
Muscular dystrophy-dystroglycanopathy (congenital with impaired intellectual development), type b2 Walker-warburg syndrome
1 gene
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1 of 1 corroborated by 2+ sources
POMT2(4)
0.059 1.000 1.03e-3 1.57e-3 ✓ sig. —
Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a6 Walker-warburg syndrome
1 gene
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1 of 1 corroborated by 2+ sources
LARGE1(4)
0.059 1.000 1.03e-3 1.57e-3 ✓ sig. —
Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a9 Walker-warburg syndrome
1 gene
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1 of 1 corroborated by 2+ sources
DAG1(4)
0.059 1.000 1.03e-3 1.57e-3 ✓ sig. —
Muscular dystrophy-dystroglycanopathy (congenital without impaired intellectual development), type b4 Walker-warburg syndrome
1 gene
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1 of 1 corroborated by 2+ sources
FKTN(4)
0.059 1.000 1.03e-3 1.57e-3 ✓ sig. —
Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a8 Walker-warburg syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
POMGNT2(4)
0.059 1.000 1.03e-3 1.57e-3 ✓ sig. —
Muscle eye brain disease Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a9
1 gene
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1 of 1 corroborated by 2+ sources
DAG1(3)
0.063 1.000 9.68e-4 1.50e-3 ✓ sig. —

Showing 25 of 89 matching pairs, sorted by significance (descending). Click a column header to sort.