Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Pash syndrome Schizophrenia
1 gene
Show details
1 of 1 corroborated by 2+ sources
NCSTN(2)
0.000 1.000 1.65e-1 1.66e-1 —
Alzheimer disease Pash syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
NCSTN(2)
0.000 1.000 1.44e-1 1.45e-1 —
Barth syndrome Coronary artery disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
0.001 1.000 7.42e-2 7.55e-2 —
Deeah syndrome Kidney disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
MADD(4)
0.002 1.000 2.76e-2 2.94e-2 ✓ sig. —
Deeah syndrome Migraine
1 gene
Show details
1 of 1 corroborated by 2+ sources
MADD(4)
0.002 1.000 2.62e-2 2.80e-2 ✓ sig. —
Deeah syndrome Open angle glaucoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
MADD(4)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. Cluster 240 →
Global developmental delay marshall-smith syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
NFIX(2)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Deeah syndrome Non-specific syndromic intellectual disability
1 gene
Show details
1 of 1 corroborated by 2+ sources
MADD(4)
0.003 1.000 2.39e-2 2.57e-2 ✓ sig. —
Leigh syndrome Lipoyltransferase deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
LIPT1(7)
0.009 0.333 2.07e-2 2.25e-2 ✓ sig. —
Barth syndrome Dilated cardiomyopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
0.004 1.000 1.77e-2 1.94e-2 ✓ sig. —
Barth syndrome Cardiomyopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
0.004 1.000 1.58e-2 1.75e-2 ✓ sig. —
Leigh syndrome Sandhoff disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
GFM2(2)
0.009 0.500 1.39e-2 1.54e-2 ✓ sig. Cluster 50 →
Cardioembolic stroke Wiskott-aldrich syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
WIPF1(6)
0.010 0.500 1.31e-2 1.46e-2 ✓ sig. —
Atrial flutter Wiskott-aldrich syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
WIPF1(6)
0.012 0.500 1.05e-2 1.19e-2 ✓ sig. —
Hodgkin lymphoma marshall-smith syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
NFIX(2)
0.009 1.000 7.21e-3 8.52e-3 ✓ sig. —
Proliferative diabetic retinopathy Pseudo-torch syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
STAT2(5)
0.026 0.333 7.00e-3 8.28e-3 ✓ sig. —
Hepatoencephalopathy due to combined oxidative phosphorylation defect Leigh syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
GFM1(5)
0.009 1.000 6.95e-3 8.23e-3 ✓ sig. —
Charcot-Marie-Tooth disease axonal type 2Z Leigh syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
MORC2(2)
0.009 1.000 6.95e-3 8.23e-3 ✓ sig. —
Codas syndrome Leigh syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
LONP1(7)
0.009 1.000 6.95e-3 8.23e-3 ✓ sig. Cluster 50 →
Childhood-onset dystonia Leigh syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
MECR(2)
0.009 1.000 6.95e-3 8.23e-3 ✓ sig. —
Childhood-onset dystonia with optic atrophy and basal ganglia abnormalities Leigh syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
MECR(5)
0.009 1.000 6.95e-3 8.23e-3 ✓ sig. —
Cataract-growth hormone deficiency-skeletal dysplasia syndrome Leigh syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
IARS2(6)
0.009 1.000 6.95e-3 8.23e-3 ✓ sig. —
Bjornstad syndrome Leigh syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
BCS1L(6)
0.009 1.000 6.95e-3 8.23e-3 ✓ sig. —
Biotin-thiamine-responsive basal ganglia disease Leigh syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC19A3(5)
0.009 1.000 6.95e-3 8.23e-3 ✓ sig. —
Biotinidase deficiency Leigh syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
BTD(8)
0.009 1.000 6.95e-3 8.23e-3 ✓ sig. —

Showing 25 of 202 matching pairs, sorted by significance (descending). Click a column header to sort.