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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Copper metabolism disorder Major depressive disorder
1 gene
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1 of 1 corroborated by 2+ sources
CCS(2)
0.001 1.000 1.27e-1 1.28e-1 —
Corticosteroid-binding globulin deficiency Major depressive disorder
1 gene
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1 of 1 corroborated by 2+ sources
0.001 1.000 1.27e-1 1.28e-1 —
Major depressive disorder Mak-related retinopathy
1 gene
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1 of 1 corroborated by 2+ sources
MAK(3)
0.001 1.000 1.27e-1 1.28e-1 —
immunodeficiency, common variable, 5 Major depressive disorder
1 gene
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1 of 1 corroborated by 2+ sources
MS4A1(2)
0.001 1.000 1.27e-1 1.28e-1 —
hereditary leiomyomatosis and renal cell cancer Major depressive disorder
1 gene
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1 of 1 corroborated by 2+ sources
FH(2)
0.001 1.000 1.27e-1 1.28e-1 —
hyperphenylalaninemia due to DNAJC12 deficiency Major depressive disorder
1 gene
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1 of 1 corroborated by 2+ sources
DNAJC12(2)
0.001 1.000 1.27e-1 1.28e-1 —
hypotaurinemic retinal degeneration and cardiomyopathy Major depressive disorder
1 gene
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1 of 1 corroborated by 2+ sources
SLC6A6(2)
0.001 1.000 1.27e-1 1.28e-1 —
Cayman type cerebellar ataxia Major depressive disorder
1 gene
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1 of 1 corroborated by 2+ sources
ATCAY(2)
0.001 1.000 1.27e-1 1.28e-1 —
chondrodysplasia with joint dislocations, gpapp type Major depressive disorder
1 gene
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1 of 1 corroborated by 2+ sources
BPNT2(2)
0.001 1.000 1.27e-1 1.28e-1 —
ciliary dyskinesia, primary, 45 Major depressive disorder
1 gene
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1 of 1 corroborated by 2+ sources
TTC12(2)
0.001 1.000 1.27e-1 1.28e-1 —
band heterotopia of brain Major depressive disorder
1 gene
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1 of 1 corroborated by 2+ sources
EML1(2)
0.001 1.000 1.27e-1 1.28e-1 —
BBS4-related ciliopathy Major depressive disorder
1 gene
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1 of 1 corroborated by 2+ sources
BBS4(2)
0.001 1.000 1.27e-1 1.28e-1 —
Galactose mutarotase deficiency Major depressive disorder
1 gene
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1 of 1 corroborated by 2+ sources
GALM(2)
0.001 1.000 1.27e-1 1.28e-1 —
Major depressive disorder Peho-like syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CCDC88A(5)
0.001 1.000 1.27e-1 1.28e-1 —
Major depressive disorder primary ciliary dyskinesia 9
1 gene
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1 of 1 corroborated by 2+ sources
DNAI2(2)
0.001 1.000 1.27e-1 1.28e-1 —
Congenital isolated acth deficiency Major depressive disorder
1 gene
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1 of 1 corroborated by 2+ sources
TBX19(4)
0.001 1.000 1.27e-1 1.28e-1 —
Ear disorder Scoliosis
1 gene
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SCML4(1)
0.001 0.500 1.30e-1 1.31e-1 Cluster 2 →
Breast cancer Keratosis palmoplantaris papulosa
1 gene
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1 of 1 corroborated by 2+ sources
COL14A1(2)
0.001 0.500 1.34e-1 1.35e-1 —
adult neuronal ceroid lipofuscinosis Breast cancer
1 gene
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1 of 1 corroborated by 2+ sources
CTSF(2)
0.001 0.500 1.34e-1 1.35e-1 —
2,4-dienoyl-coa reductase deficiency Insomnia
1 gene
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1 of 1 corroborated by 2+ sources
DECR1(3)
0.001 0.500 1.35e-1 1.36e-1 —
Carnitine acetyltransferase deficiency Insomnia
1 gene
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1 of 1 corroborated by 2+ sources
0.001 0.500 1.35e-1 1.36e-1 —
Attention deficit hyperactivity disorder Fructokinase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
CGREF1(2)
0.001 0.500 1.38e-1 1.40e-1 —
Anauxetic dysplasia Desbuquois syndrome
1 gene
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1 of 1 corroborated by 2+ sources
POP1(5)
0.002 0.250 1.39e-1 1.41e-1 —
Coronary artery disease Ear disorder
1 gene
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SCML4(1)
0.001 0.500 1.43e-1 1.44e-1 —
Coronary artery disease Ververi-brady syndrome
1 gene
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1 of 1 corroborated by 2+ sources
QRICH1(5)
0.001 0.500 1.43e-1 1.44e-1 —

Showing 25 of 20825 pairs, sorted by significance (ascending). Click a column header to sort.