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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
complex neurodevelopmental disorder Developmental delay with behavioral abnormalities
1 gene
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1 of 1 corroborated by 2+ sources
ADGRL1(5)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
complex neurodevelopmental disorder Developmental delay with dysmorphic facies and dental anomalies
1 gene
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1 of 1 corroborated by 2+ sources
SATB1(4)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
dilated cardiomyopathy 1J Nonsyndromic hearing loss
1 gene
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1 of 1 corroborated by 2+ sources
EYA4(4)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
complex neurodevelopmental disorder Epilepsy due to perinatal stroke
1 gene
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1 of 1 corroborated by 2+ sources
ST3GAL3(2)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
Brain abnormalities developmental delay facial dysmorphism intellectual disability syndrome complex neurodevelopmental disorder
1 gene
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1 of 1 corroborated by 2+ sources
MEF2C(3)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
hearing impairment and infertile male syndrome Nonsyndromic hearing loss
1 gene
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1 of 1 corroborated by 2+ sources
CDC14A(4)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
hearing loss, autosomal recessive 119 Nonsyndromic hearing loss
1 gene
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1 of 1 corroborated by 2+ sources
AFG2B(2)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
hearing loss, autosomal recessive 120 Nonsyndromic hearing loss
1 gene
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1 of 1 corroborated by 2+ sources
MINAR2(2)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. Cluster 26 →
complex neurodevelopmental disorder holoprosencephaly 12 with or without pancreatic agenesis
1 gene
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CNOT1(1)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
complex neurodevelopmental disorder Tolchin-le caignec syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SOX6(4)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
complex neurodevelopmental disorder Usmani-riazuddin syndrome
1 gene
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1 of 1 corroborated by 2+ sources
AP1G1(5)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. Cluster 6 →
Nonsyndromic hearing loss Worster drought syndrome
1 gene
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TMTC4(1)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. Cluster 26 →
Chromosome 1q deletion syndrome complex neurodevelopmental disorder
1 gene
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1 of 1 corroborated by 2+ sources
ZBTB18(3)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
Chromosome 1q43-q44 deletion syndrome complex neurodevelopmental disorder
1 gene
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1 of 1 corroborated by 2+ sources
ZBTB18(2)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
Biliary tract cancer Chromosome 20q11-q12 deletion syndrome
1 gene
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1 of 1 corroborated by 2+ sources
EPB41L1(3)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
Chromosome 20q11-q12 deletion syndrome complex neurodevelopmental disorder
1 gene
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1 of 1 corroborated by 2+ sources
EPB41L1(3)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
Clark-baraitser syndrome complex neurodevelopmental disorder
1 gene
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1 of 1 corroborated by 2+ sources
TRIP12(5)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. Cluster 6 →
Nonsyndromic hearing loss Sensorineural deafness with dilated cardiomyopathy
1 gene
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1 of 1 corroborated by 2+ sources
EYA4(4)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
Nonsyndromic hearing loss Sensorineural hearing loss-spastic quadriplegia–intellectual disability
1 gene
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1 of 1 corroborated by 2+ sources
AFG2B(2)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
Nonsyndromic hearing loss Stress-induced neurodegenerative ataxia seizure syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ADPRS(2)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
complex neurodevelopmental disorder Den hoed-de boer-voisin syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SATB1(3)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
Biliary tract cancer friedreich ataxia
1 gene
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1 of 1 corroborated by 2+ sources
FXN(2)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. Cluster 67 →
Biliary tract cancer glycosylphosphatidylinositol biosynthesis defect 21
1 gene
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1 of 1 corroborated by 2+ sources
PIGU(2)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
complex neurodevelopmental disorder Intellectual developmental disorder autism speech dysmorphic
1 gene
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1 of 1 corroborated by 2+ sources
CHD1(2)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —
complex neurodevelopmental disorder Intellectual developmental disorder behavioral dysmorphic
1 gene
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1 of 1 corroborated by 2+ sources
PHF21A(5)
0.008 1.000 7.66e-3 8.95e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.