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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Cardiac arrhythmia Trichomegaly
1 gene
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1 of 1 corroborated by 2+ sources
FGF5(5)
0.010 1.000 6.36e-3 7.63e-3 ✓ sig. —
Preeclampsia Zaki syndrome
1 gene
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1 of 1 corroborated by 2+ sources
WLS(3)
0.010 1.000 6.36e-3 7.63e-3 ✓ sig. Cluster 139 →
Neurodegeneration peripheral neuropathy syndrome Preeclampsia
1 gene
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1 of 1 corroborated by 2+ sources
CLCN6(2)
0.010 1.000 6.36e-3 7.63e-3 ✓ sig. —
neurodegeneration, childhood-onset, with hypotonia, respiratory insufficiency, and brain imaging abnormalities Preeclampsia
1 gene
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1 of 1 corroborated by 2+ sources
CLCN6(2)
0.010 1.000 6.36e-3 7.63e-3 ✓ sig. —
Cardiac arrhythmia ornithine translocase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
0.010 1.000 6.36e-3 7.63e-3 ✓ sig. —
Cardiac arrhythmia polyglucosan body myopathy type 2
1 gene
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1 of 1 corroborated by 2+ sources
GYG1(3)
0.010 1.000 6.36e-3 7.63e-3 ✓ sig. —
Cardiac arrhythmia Progressive myoclonic epilepsy with intracellular inclusions
1 gene
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1 of 1 corroborated by 2+ sources
PRDM8(3)
0.010 1.000 6.36e-3 7.63e-3 ✓ sig. —
Alanine-glyoxylate aminotransferase deficiency Cardiac arrhythmia
1 gene
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1 of 1 corroborated by 2+ sources
AGXT(3)
0.010 1.000 6.36e-3 7.63e-3 ✓ sig. —
Factor x deficiency Preeclampsia
1 gene
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1 of 1 corroborated by 2+ sources
F10(4)
0.010 1.000 6.36e-3 7.63e-3 ✓ sig. —
frank-ter haar syndrome Preeclampsia
1 gene
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1 of 1 corroborated by 2+ sources
0.010 1.000 6.36e-3 7.63e-3 ✓ sig. —
Atrial and intestinal dysrhythmia Cardiac arrhythmia
1 gene
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1 of 1 corroborated by 2+ sources
SGO1(6)
0.010 1.000 6.36e-3 7.63e-3 ✓ sig. —
Congenital factor x deficiency Preeclampsia
1 gene
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1 of 1 corroborated by 2+ sources
F10(4)
0.010 1.000 6.36e-3 7.63e-3 ✓ sig. —
Boudin-mortier syndrome Preeclampsia
1 gene
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1 of 1 corroborated by 2+ sources
NPR3(4)
0.010 1.000 6.36e-3 7.63e-3 ✓ sig. —
Auditory system disease Thyroid carcinoma
1 gene
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VAV3(1)
0.050 0.111 6.41e-3 7.68e-3 ✓ sig. —
ATP6AP2-related disorder Congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
ATP6AP2(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
B4GALT1-congenital disorder of glycosylation Congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
B4GALT1(6)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation Intellectual developmental disorder seizures behavioral
1 gene
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1 of 1 corroborated by 2+ sources
ALG14(4)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation Intermittent porphyria
1 gene
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1 of 1 corroborated by 2+ sources
HMBS(3)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation congenital muscular dystrophy with intellectual disability and severe epilepsy
1 gene
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1 of 1 corroborated by 2+ sources
DPM2(4)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation DDOST-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
DDOST(7)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation TMEM165-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
TMEM165(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation X-linked immunodeficiency with magnesium defect, epstein-barr virus infection and neoplasia
1 gene
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1 of 1 corroborated by 2+ sources
MAGT1(6)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Graves disease X-linked immunodeficiency with magnesium defect, epstein-barr virus infection and neoplasia
1 gene
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1 of 1 corroborated by 2+ sources
MAGT1(6)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation X-linked parkinsonism-spasticity syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ATP6AP2(6)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation Developmental delay and seizures
1 gene
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1 of 1 corroborated by 2+ sources
DHDDS(4)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.