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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Arthrogryposis multiplex congenita Trismus-pseudocamptodactyly syndrome
1 gene
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1 of 1 corroborated by 2+ sources
MYH8(3)
0.014 1.000 4.68e-3 5.79e-3 ✓ sig. —
Leber congenital amaurosis TTC8-related ciliopathy
1 gene
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1 of 1 corroborated by 2+ sources
TTC8(2)
0.014 1.000 4.68e-3 5.79e-3 ✓ sig. —
Leber congenital amaurosis TUBB4B-related ciliopathy
1 gene
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1 of 1 corroborated by 2+ sources
TUBB4B(5)
0.014 1.000 4.68e-3 5.79e-3 ✓ sig. Cluster 7 →
Barrett esophagus Ulnar-fibular ray defect and brachydactyly
1 gene
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1 of 1 corroborated by 2+ sources
RP1L1(2)
0.014 1.000 4.68e-3 5.79e-3 ✓ sig. —
Arthrogryposis multiplex congenita Vexas syndrome
1 gene
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1 of 1 corroborated by 2+ sources
UBA1(5)
0.014 1.000 4.68e-3 5.79e-3 ✓ sig. —
Arthrogryposis multiplex congenita Wieacker syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ZC4H2(2)
0.014 1.000 4.68e-3 5.79e-3 ✓ sig. —
Arthrogryposis multiplex congenita Wieacker-wolff syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ZC4H2(6)
0.014 1.000 4.68e-3 5.79e-3 ✓ sig. —
Leber congenital amaurosis X-linked retinitis pigmentosa
1 gene
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RP2(1)
0.014 1.000 4.68e-3 5.79e-3 ✓ sig. —
Barrett esophagus lichtenstein-knorr syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SLC9A1(3)
0.014 1.000 4.68e-3 5.79e-3 ✓ sig. —
Leber congenital amaurosis microcornea-myopic chorioretinal atrophy
1 gene
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1 of 1 corroborated by 2+ sources
0.014 1.000 4.68e-3 5.79e-3 ✓ sig. —
Arthrogryposis multiplex congenita Miles-carpenter syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ZC4H2(2)
0.014 1.000 4.68e-3 5.79e-3 ✓ sig. —
Eating disorder Mucosulfatidosis
1 gene
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1 of 1 corroborated by 2+ sources
SUMF1(3)
0.014 1.000 4.68e-3 5.79e-3 ✓ sig. —
Arthrogryposis multiplex congenita Hecht syndrome
1 gene
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1 of 1 corroborated by 2+ sources
MYH8(3)
0.014 1.000 4.68e-3 5.79e-3 ✓ sig. —
Arthrogryposis multiplex congenita Hypo-akinesia disorder of prenatal onset
1 gene
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1 of 1 corroborated by 2+ sources
CHRNG(3)
0.014 1.000 4.68e-3 5.79e-3 ✓ sig. —
IMPDH1-related retinopathy Leber congenital amaurosis
1 gene
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1 of 1 corroborated by 2+ sources
IMPDH1(7)
0.014 1.000 4.68e-3 5.79e-3 ✓ sig. —
LCA5-related retinopathy Leber congenital amaurosis
1 gene
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1 of 1 corroborated by 2+ sources
LCA5(8)
0.014 1.000 4.68e-3 5.79e-3 ✓ sig. —
Leber congenital amaurosis leber congenital amaurosis 15
1 gene
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1 of 1 corroborated by 2+ sources
TULP1(6)
0.014 1.000 4.68e-3 5.79e-3 ✓ sig. —
Barrett esophagus occult macular dystrophy
1 gene
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1 of 1 corroborated by 2+ sources
RP1L1(2)
0.014 1.000 4.68e-3 5.79e-3 ✓ sig. —
Allergic contact dermatitis systemic lupus erythematosus 17
1 gene
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1 of 1 corroborated by 2+ sources
TLR7(3)
0.014 1.000 4.74e-3 5.86e-3 ✓ sig. Cluster 16 →
Psoriatic arthritis Systemic primary carnitine deficiency
1 gene
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1 of 1 corroborated by 2+ sources
SLC22A5(4)
0.014 1.000 4.74e-3 5.86e-3 ✓ sig. —
Allergic contact dermatitis Papillon-lefevre syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CTSC(6)
0.014 1.000 4.74e-3 5.86e-3 ✓ sig. —
Allergic contact dermatitis pediatric systemic lupus erythematosus
1 gene
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1 of 1 corroborated by 2+ sources
SAT1(3)
0.014 1.000 4.74e-3 5.86e-3 ✓ sig. —
Congenital factor x deficiency Psoriatic arthritis
1 gene
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1 of 1 corroborated by 2+ sources
F10(4)
0.014 1.000 4.74e-3 5.86e-3 ✓ sig. —
Factor x deficiency Psoriatic arthritis
1 gene
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1 of 1 corroborated by 2+ sources
F10(4)
0.014 1.000 4.74e-3 5.86e-3 ✓ sig. —
Allergic contact dermatitis Familial partial lipodystrophy
1 gene
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1 of 1 corroborated by 2+ sources
CIDEC(5)
0.014 1.000 4.74e-3 5.86e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.