Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Bone fracture Parkinsonism with polyneuropathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
UQCRC1(4)
0.014 1.000 4.42e-3 5.53e-3 ✓ sig. Cluster 299 →
Combined oxidative phosphorylation deficiency Peripheral neuropathy with variable spasticity, exercise intolerance, and developmental delay
1 gene
Show details
1 of 1 corroborated by 2+ sources
TRMT5(6)
0.014 1.000 4.42e-3 5.53e-3 ✓ sig. Cluster 50 →
Congenital impairment of spermatozoa motility Synovial sarcoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
SSX1(2)
0.038 0.333 4.47e-3 5.60e-3 ✓ sig. —
Cirrhosis-dystonia-polycythemia-hypermanganesemia syndrome Urolithiasis
1 gene
Show details
1 of 1 corroborated by 2+ sources
0.014 1.000 4.48e-3 5.60e-3 ✓ sig. —
Cohen syndrome Urolithiasis
1 gene
Show details
1 of 1 corroborated by 2+ sources
VPS13B(8)
0.014 1.000 4.48e-3 5.60e-3 ✓ sig. —
Body skin hyperlaxity Urolithiasis
1 gene
Show details
1 of 1 corroborated by 2+ sources
GGCX(5)
0.014 1.000 4.48e-3 5.60e-3 ✓ sig. —
cardiomyopathy, dilated, 2g Non-organic psychosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
LMOD2(2)
0.014 1.000 4.48e-3 5.60e-3 ✓ sig. —
Non-organic psychosis pediatric systemic lupus erythematosus
1 gene
Show details
1 of 1 corroborated by 2+ sources
SAT1(2)
0.014 1.000 4.48e-3 5.60e-3 ✓ sig. —
microcephalic osteodysplastic primordial dwarfism type II Non-organic psychosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
PCNT(2)
0.014 1.000 4.48e-3 5.60e-3 ✓ sig. —
Hypertryptophanemia Non-organic psychosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
TDO2(6)
0.014 1.000 4.48e-3 5.60e-3 ✓ sig. —
2,8-dihydroxyadenine urolithiasis Urolithiasis
1 gene
Show details
1 of 1 corroborated by 2+ sources
APRT(2)
0.014 1.000 4.48e-3 5.60e-3 ✓ sig. —
3-hydroxyisobutyric aciduria Urolithiasis
1 gene
Show details
1 of 1 corroborated by 2+ sources
HIBADH(3)
0.014 1.000 4.48e-3 5.60e-3 ✓ sig. Cluster 178 →
Adenine phosphoribosyltransferase deficiency Urolithiasis
1 gene
Show details
1 of 1 corroborated by 2+ sources
APRT(3)
0.014 1.000 4.48e-3 5.60e-3 ✓ sig. —
Anterior maxillary protrusion-strabismus-intellectual disability syndrome Non-organic psychosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
SOBP(2)
0.014 1.000 4.48e-3 5.60e-3 ✓ sig. —
inherited pseudoxanthoma elasticum Urolithiasis
1 gene
Show details
1 of 1 corroborated by 2+ sources
ABCC6(2)
0.014 1.000 4.48e-3 5.60e-3 ✓ sig. —
Intellectual developmental disorder hypotonia spastic sleep Non-organic psychosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
ANK3(3)
0.014 1.000 4.48e-3 5.60e-3 ✓ sig. —
Intellectual disability, anterior maxillary protrusion, and strabismus Non-organic psychosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
SOBP(2)
0.014 1.000 4.48e-3 5.60e-3 ✓ sig. —
Dwarfism Thyroid dyshormonogenesis
1 gene
Show details
1 of 1 corroborated by 2+ sources
TG(5)
0.059 0.143 4.54e-3 5.67e-3 ✓ sig. —
Omenn syndrome Proteasome associated autoinflammatory syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
PSMB10(5)
0.059 0.143 4.54e-3 5.67e-3 ✓ sig. —
Diabetic foot Intestinal disease
1 gene
Show details
MAPK14(1)
0.053 0.200 4.54e-3 5.67e-3 ✓ sig. —
autosomal recessive limb-girdle muscular dystrophy Dowling degos disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
POGLUT1(7)
0.053 0.200 4.54e-3 5.67e-3 ✓ sig. —
Congenital epicanthus Malocclusion
1 gene
Show details
PTK2(1)
0.053 0.200 4.54e-3 5.67e-3 ✓ sig. —
Growth disorder Potocki-lupski syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
RAI1(3)
0.027 0.500 4.54e-3 5.67e-3 ✓ sig. —
Congenital stromal corneal dystrophy Esophageal adenocarcinoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
SPARCL1(2)
0.027 0.500 4.54e-3 5.67e-3 ✓ sig. —
De sanctis-cacchione syndrome Growth disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
ERCC6(4)
0.027 0.500 4.54e-3 5.67e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.