Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Specific learning disability Tatton-Brown-Rahman overgrowth syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
DNMT3A(2)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 268 →
Acro-dermo-ungual-lacrimal-tooth syndrome Omphalocele exstrophy imperforate anus
1 gene
Show details
1 of 1 corroborated by 2+ sources
TP63(2)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. Cluster 27 →
Bonnevie-ullrich syndrome Congenital isolated growth hormone deficiency
1 gene
Show details
GH1(1)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
Clear cell papillary renal cell carcinoma Waardenburg-shah syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
MITF(2)
0.125 0.250 1.04e-3 1.74e-3 ✓ sig. —
Discordant ventriculoarterial connection Knobloch syndrome
1 gene
Show details
SLC19A1(1)
0.125 0.250 1.04e-3 1.74e-3 ✓ sig. Cluster 113 →
Dyslipidemias H syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC29A3(4)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Aprosencephaly Coach syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
0.111 0.250 1.30e-3 2.06e-3 ✓ sig. —
Coach syndrome Encephalocele
1 gene
Show details
1 of 1 corroborated by 2+ sources
CC2D2A(3)
0.111 0.250 1.30e-3 2.06e-3 ✓ sig. —
Brown tendon sheath syndrome Torsion dystonia
1 gene
Show details
1 of 1 corroborated by 2+ sources
TUBB4A(3)
0.100 0.333 1.36e-3 2.15e-3 ✓ sig. —
Chudley-mccullough syndrome Hereditary elliptocytosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
SPTB(4)
0.100 0.333 1.36e-3 2.15e-3 ✓ sig. Cluster 400 →
Focal cortical dysplasia overgrowth syndrome and/or cerebral malformations due to abnormalities in MTOR pathway genes
1 gene
Show details
1 of 1 corroborated by 2+ sources
MTOR(4)
0.100 0.333 1.36e-3 2.15e-3 ✓ sig. —
Hepatic veno occlusive disease Pseudo-torch syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
OCLN(6)
0.100 0.333 1.36e-3 2.15e-3 ✓ sig. —
Leiomyosarcoma Pseudo-torch syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
USP18(6)
0.100 0.333 1.36e-3 2.15e-3 ✓ sig. Cluster 213 →
Acro-dermo-ungual-lacrimal-tooth syndrome Bladder exstrophy
1 gene
Show details
1 of 1 corroborated by 2+ sources
TP63(2)
0.045 1.000 1.36e-3 2.15e-3 ✓ sig. Cluster 27 →
Leukodystrophy Wiedemann-rautenstrauch syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
POLR3A(3)
0.037 1.000 1.69e-3 2.53e-3 ✓ sig. —
overgrowth syndrome and/or cerebral malformations due to abnormalities in MTOR pathway genes Small cell carcinoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
MTOR(2)
0.083 0.333 1.75e-3 2.61e-3 ✓ sig. —
Acro-dermo-ungual-lacrimal-tooth syndrome Bladder exstrophy and epispadias complex
1 gene
Show details
1 of 1 corroborated by 2+ sources
TP63(2)
0.036 1.000 1.75e-3 2.61e-3 ✓ sig. Cluster 27 →
Chromodomain helicase dna binding protein 8 overgrowth syndrome Congenital myasthenic syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
CHD8(2)
0.033 1.000 1.88e-3 2.76e-3 ✓ sig. —
Chudley-mccullough syndrome Spherocytosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
SPTB(3)
0.077 0.333 1.95e-3 2.83e-3 ✓ sig. —
Hypomyelinating leukodystrophy Wiedemann-rautenstrauch syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
POLR3A(4)
0.032 1.000 1.95e-3 2.83e-3 ✓ sig. —
Chromodomain helicase dna binding protein 8 overgrowth syndrome Gastrointestinal disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
CHD8(2)
0.030 1.000 2.08e-3 2.97e-3 ✓ sig. —
marshall-smith syndrome Strabismus
1 gene
Show details
1 of 1 corroborated by 2+ sources
NFIX(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
Barth syndrome Left ventricular noncompaction cardiomyopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
0.026 1.000 2.47e-3 3.37e-3 ✓ sig. Cluster 4 →
Knobloch syndrome Transposition of the great arteries
1 gene
Show details
SLC19A1(1)
0.067 0.250 2.85e-3 3.81e-3 ✓ sig. Cluster 113 →
Severe congenital neutropenia Wiskott-aldrich syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
WAS(7)
0.042 0.500 2.86e-3 3.81e-3 ✓ sig. —

Showing 25 of 202 matching pairs, sorted by significance (ascending). Click a column header to sort.