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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Conduction disorder of the heart dilated cardiomyopathy 1BB
1 gene
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1 of 1 corroborated by 2+ sources
DSG2(2)
0.040 1.000 1.56e-3 2.38e-3 ✓ sig. Cluster 4 →
dilated cardiomyopathy 2B Peroxisome biogenesis disorder
1 gene
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1 of 1 corroborated by 2+ sources
GATAD1(2)
0.040 1.000 1.56e-3 2.38e-3 ✓ sig. —
Disorder of sex development Hyperaldosteronism
1 gene
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1 of 1 corroborated by 2+ sources
RXFP2(2)
0.040 1.000 1.56e-3 2.38e-3 ✓ sig. —
Blood coagulation disorder Factor x deficiency
1 gene
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1 of 1 corroborated by 2+ sources
F10(3)
0.040 1.000 1.56e-3 2.38e-3 ✓ sig. —
Factor xii deficiency Transient ischemic attack
1 gene
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1 of 1 corroborated by 2+ sources
F12(4)
0.040 1.000 1.56e-3 2.38e-3 ✓ sig. —
familial hyperaldosteronism type III Hyperaldosteronism
1 gene
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1 of 1 corroborated by 2+ sources
KCNJ5(6)
0.040 1.000 1.56e-3 2.38e-3 ✓ sig. —
familial hyperaldosteronism type III Hereditary atrial fibrillation
1 gene
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1 of 1 corroborated by 2+ sources
KCNJ5(2)
0.040 1.000 1.56e-3 2.38e-3 ✓ sig. —
familial meningioma Meningioma
1 gene
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1 of 1 corroborated by 2+ sources
SMARCE1(6)
0.040 1.000 1.56e-3 2.38e-3 ✓ sig. —
fanconi anemia complementation group d2 Uranostaphyloschisis
1 gene
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1 of 1 corroborated by 2+ sources
FANCD2(2)
0.040 1.000 1.56e-3 2.38e-3 ✓ sig. Cluster 282 →
FLVCR1-related retinopathy with or without ataxia Short rib dysplasia-polydactyly syndrome
1 gene
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1 of 1 corroborated by 2+ sources
FLVCR1(2)
0.040 1.000 1.56e-3 2.38e-3 ✓ sig. —
frontotemporal dementia and/or amyotrophic lateral sclerosis 1 Progressive myoclonic epilepsy
1 gene
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1 of 1 corroborated by 2+ sources
C9orf72(2)
0.040 1.000 1.56e-3 2.38e-3 ✓ sig. —
frontotemporal dementia and/or amyotrophic lateral sclerosis 5 Polyneuropathy
1 gene
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1 of 1 corroborated by 2+ sources
CCNF(2)
0.040 1.000 1.56e-3 2.38e-3 ✓ sig. —
Glass syndrome Uranostaphyloschisis
1 gene
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1 of 1 corroborated by 2+ sources
SATB2(2)
0.040 1.000 1.56e-3 2.38e-3 ✓ sig. —
Glycine n-methyltransferase deficiency Peroxisome biogenesis disorder
1 gene
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1 of 1 corroborated by 2+ sources
GNMT(5)
0.040 1.000 1.56e-3 2.38e-3 ✓ sig. —
glycogen storage disease due to glycogen branching enzyme deficiency Polyneuropathy
1 gene
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1 of 1 corroborated by 2+ sources
GBE1(2)
0.040 1.000 1.56e-3 2.38e-3 ✓ sig. —
Curry-jones syndrome Meningioma
1 gene
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1 of 1 corroborated by 2+ sources
SMO(5)
0.040 1.000 1.56e-3 2.38e-3 ✓ sig. Cluster 292 →
Den hoed-de boer-voisin syndrome Hyperaldosteronism
1 gene
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1 of 1 corroborated by 2+ sources
SATB1(2)
0.040 1.000 1.56e-3 2.38e-3 ✓ sig. —
thrombocytopenia 4 Transient ischemic attack
1 gene
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1 of 1 corroborated by 2+ sources
CYCS(2)
0.040 1.000 1.56e-3 2.38e-3 ✓ sig. —
cutis laxa, autosomal dominant 1 Williams syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ELN(6)
0.040 1.000 1.56e-3 2.38e-3 ✓ sig. —
Meningioma Winter shortland temple syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SMO(3)
0.040 1.000 1.56e-3 2.38e-3 ✓ sig. Cluster 292 →
Peroxisome biogenesis disorder X-linked cerebral adrenoleukodystrophy
1 gene
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1 of 1 corroborated by 2+ sources
ABCD1(3)
0.040 1.000 1.56e-3 2.38e-3 ✓ sig. —
Uranostaphyloschisis X-linked cleft palate and ankloglossia
1 gene
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1 of 1 corroborated by 2+ sources
TBX22(2)
0.040 1.000 1.56e-3 2.38e-3 ✓ sig. Cluster 282 →
Hyperaldosteronism X-linked non progressive cerebellar ataxia
1 gene
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1 of 1 corroborated by 2+ sources
ATP2B3(4)
0.040 1.000 1.56e-3 2.38e-3 ✓ sig. —
17-beta-hydroxysteroid dehydrogenase deficiency Myoclonic epilepsy
1 gene
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1 of 1 corroborated by 2+ sources
HSD17B3(4)
0.040 1.000 1.56e-3 2.38e-3 ✓ sig. —
1p31p32 microdeletion syndrome Uranostaphyloschisis
1 gene
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1 of 1 corroborated by 2+ sources
NFIA(2)
0.040 1.000 1.56e-3 2.38e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.