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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Diastolic heart failure Sarcopenia
1 gene
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FTO(1)
0.077 0.500 1.43e-3 2.23e-3 ✓ sig. —
Silver-russell syndrome Temple syndrome
1 gene
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1 of 1 corroborated by 2+ sources
DLK1(2)
0.077 0.500 1.43e-3 2.23e-3 ✓ sig. Cluster 199 →
Macrothrombocytopenia macrothrombocytopenia, isolated
1 gene
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1 of 1 corroborated by 2+ sources
TRPM7(4)
0.077 0.500 1.43e-3 2.23e-3 ✓ sig. —
Diffuse mesangial sclerosis Hematuria
1 gene
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1 of 1 corroborated by 2+ sources
COL4A4(5)
0.077 0.500 1.43e-3 2.23e-3 ✓ sig. Cluster 49 →
Macrothrombocytopenia Parkinson-dementia complex of guam
1 gene
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1 of 1 corroborated by 2+ sources
TRPM7(3)
0.077 0.500 1.43e-3 2.23e-3 ✓ sig. —
Congenital short bowel syndrome Post-operative acute kidney injury
1 gene
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1 of 1 corroborated by 2+ sources
CLMP(4)
0.077 0.500 1.43e-3 2.23e-3 ✓ sig. —
Central precocious puberty Temple syndrome
1 gene
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1 of 1 corroborated by 2+ sources
DLK1(2)
0.077 0.500 1.43e-3 2.23e-3 ✓ sig. —
Central serous retinopathy Panuveitis
1 gene
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1 of 1 corroborated by 2+ sources
CFH(2)
0.077 0.500 1.43e-3 2.23e-3 ✓ sig. Cluster 107 →
Anhydramnios Cerebellar malformation
1 gene
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TMEM67(1)
0.077 0.500 1.43e-3 2.23e-3 ✓ sig. —
Chorioretinal atrophy Silver-russell syndrome
1 gene
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-(1)
0.077 0.500 1.43e-3 2.23e-3 ✓ sig. Cluster 199 →
Cochlear diseases Retinitis pigmentosa-deafness syndrome
1 gene
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1 of 1 corroborated by 2+ sources
PCDH15(2)
0.077 0.500 1.43e-3 2.23e-3 ✓ sig. —
Congenital adrenal hyperplasia Toe syndactyly-telecanthus-anogenital and renal malformations syndrome
1 gene
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STAR(1)
0.077 0.500 1.43e-3 2.23e-3 ✓ sig. —
Retinitis pigmentosa-deafness syndrome Usher syndrome type 1
1 gene
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1 of 1 corroborated by 2+ sources
MYO7A(2)
0.077 0.500 1.43e-3 2.23e-3 ✓ sig. —
Retinitis pigmentosa-deafness syndrome Usher syndrome type 2
1 gene
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1 of 1 corroborated by 2+ sources
USH2A(2)
0.077 0.500 1.43e-3 2.23e-3 ✓ sig. —
Cushing's disease Ventricular tachycardia
1 gene
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1 of 1 corroborated by 2+ sources
GNAI2(2)
0.077 0.500 1.43e-3 2.23e-3 ✓ sig. —
Hypertrichosis Ventricular tachycardia
1 gene
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1 of 1 corroborated by 2+ sources
ABCA5(3)
0.077 0.500 1.43e-3 2.23e-3 ✓ sig. —
Congenital fiber type disproportion myopathy X-linked myotubular myopathy
1 gene
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1 of 1 corroborated by 2+ sources
MTM1(4)
0.077 0.500 1.43e-3 2.23e-3 ✓ sig. —
Congenital pulmonary artery atresia Thromboangiitis obliterans
1 gene
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0.077 0.500 1.43e-3 2.23e-3 ✓ sig. Cluster 1 →
Arthrogryposis De sanctis-cacchione syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ERCC6(4)
0.077 0.500 1.43e-3 2.23e-3 ✓ sig. —
Congenital muscular dystrophy congenital muscular dystrophy with intellectual disability and severe epilepsy
1 gene
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1 of 1 corroborated by 2+ sources
DPM2(4)
0.043 1.000 1.43e-3 2.23e-3 ✓ sig. —
congenital myasthenic syndrome 6 Febrile convulsion
1 gene
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1 of 1 corroborated by 2+ sources
CHAT(2)
0.043 1.000 1.43e-3 2.23e-3 ✓ sig. —
Congenital myelofibrosis with anemia Severe congenital neutropenia
1 gene
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1 of 1 corroborated by 2+ sources
RBSN(3)
0.043 1.000 1.43e-3 2.23e-3 ✓ sig. Cluster 209 →
Congenitally uncorrected transposition of the great arteries Heterotaxy syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CFC1(5)
0.043 1.000 1.43e-3 2.23e-3 ✓ sig. —
Corneal intraepithelial dyskeratosis-palmoplantar hyperkeratosis-laryngeal dyskeratosis syndrome Keratitis
1 gene
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1 of 1 corroborated by 2+ sources
NLRP1(4)
0.043 1.000 1.43e-3 2.23e-3 ✓ sig. —
Cranio-cervical dystonia Febrile convulsion
1 gene
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1 of 1 corroborated by 2+ sources
ANO3(2)
0.043 1.000 1.43e-3 2.23e-3 ✓ sig. Cluster 47 →

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.