Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Spondyloepiphyseal dysplasia spondyloepiphyseal dysplasia with congenital joint dislocations
1 gene
Show details
1 of 1 corroborated by 2+ sources
CHST3(6)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Spondyloepiphyseal dysplasia spondyloepiphyseal dysplasia, kondo-fu type
1 gene
Show details
1 of 1 corroborated by 2+ sources
MBTPS1(5)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. Cluster 211 →
Lipodystrophy spondylometaphyseal dysplasia-cone-rod dystrophy syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
PCYT1A(4)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. Cluster 71 →
cataract 50 with or without glaucoma syndromic complex neurodevelopmental disorder
1 gene
Show details
TRPM3(1)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. Cluster 109 →
Henoch schoenlein purpura Thiopurine immunosuppressant-induced pancreatitis
1 gene
Show details
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. Cluster 1 →
Graves ophthalmopathy Thrombasthenia-thrombocytopenia
1 gene
Show details
1 of 1 corroborated by 2+ sources
GFI1B(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Clinodactyly thrombocytopenia-absent radius syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
RBM8A(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Lipodystrophy Tight skin contracture syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Anorexia TNF receptor 1-associated periodic fever syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Congenital hypoplasia of aortic arch Tooth disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
PKHD1(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Periportal fibrosis Tooth disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
PKHD1(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Temperature-sensitive oculocutaneous albinism Tooth disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
TYR(3)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Nemaline myopathy TPM3-related myopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
TPM3(5)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Potassium deficiency Trichomegaly
1 gene
Show details
1 of 1 corroborated by 2+ sources
FGF5(5)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Nuclear cataract Wolfram-like syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
WFS1(8)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Gross motor development delay X-linked intellectual disability-cerebellar hypoplasia syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
OPHN1(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Clinodactyly X-linked opitz syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
MID1(4)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Semilobar holoprosencephaly Xq25 microduplication syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
STAG2(3)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Bleeding esophageal varices Potassium deficiency
1 gene
Show details
SST(1)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Bohring-opitz syndrome Gross motor development delay
1 gene
Show details
1 of 1 corroborated by 2+ sources
ASXL1(6)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Bronchial disease Vici syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
EPG5(5)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. Cluster 1 →
Bronchial disease Woolly hair-palmoplantar keratoderma syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
KANK2(4)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Dyslipidemias H syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC29A3(4)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Hearing loss with hypertrophic cardiomyopathy Junctional epidermolysis bullosa
1 gene
Show details
MYO6(1)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Developmental regression Hepatoencephalopathy due to combined oxidative phosphorylation defect
1 gene
Show details
1 of 1 corroborated by 2+ sources
GFM1(4)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. Cluster 323 →

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.