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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Seasonal affective disorder Separation anxiety disorder
1 gene
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DRD4(1)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Primary aldosteronism sinoatrial node dysfunction and deafness
1 gene
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1 of 1 corroborated by 2+ sources
CACNA1D(3)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Loeys-dietz syndrome SMAD6-related disease
1 gene
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1 of 1 corroborated by 2+ sources
SMAD6(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Male infertility spermatogenesis disorder spermatogenic failure 38
1 gene
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1 of 1 corroborated by 2+ sources
ARMC2(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 31 →
Male infertility spermatogenesis disorder spermatogenic failure 39
1 gene
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1 of 1 corroborated by 2+ sources
DNAH17(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 31 →
Male infertility spermatogenesis disorder spermatogenic failure 5
1 gene
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1 of 1 corroborated by 2+ sources
AURKC(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Distal arthrogryposis Hecht syndrome
1 gene
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1 of 1 corroborated by 2+ sources
MYH8(4)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Hemophilia a Hemophilia a carriers
1 gene
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1 of 1 corroborated by 2+ sources
F8(6)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Hemophilia a Hemophilia b carriers
1 gene
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1 of 1 corroborated by 2+ sources
F9(3)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
hypogonadotropic hypogonadism 3 with or without anosmia Male infertility spermatogenesis disorder
1 gene
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1 of 1 corroborated by 2+ sources
PROKR2(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
hypogonadotropic hypogonadism 4 with or without anosmia Male infertility spermatogenesis disorder
1 gene
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1 of 1 corroborated by 2+ sources
PROK2(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
hypomyelinating leukodystrophy 2 Lymphedema
1 gene
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1 of 1 corroborated by 2+ sources
GJC2(3)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Ichthyosis Ichthyosis vulgaris
1 gene
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1 of 1 corroborated by 2+ sources
FLG(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Hereditary motor and sensory neuropathies Spinocerebellar ataxia
4 genes
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3 of 4 corroborated by 2+ sources
MME(6), SETX(6), PLD3(5), PRX(1)
0.024 0.061 1.03e-3 1.74e-3 ✓ sig. —
Aortic disease Osteonecrosis
2 genes
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1 of 2 corroborated by 2+ sources
NTM(1), MMP2(2)
0.035 0.105 1.04e-3 1.74e-3 ✓ sig. —
Coffin-siris syndrome Salivary gland neoplasms
2 genes
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2 of 2 corroborated by 2+ sources
SOX4(6), SOX11(4)
0.033 0.118 1.06e-3 1.77e-3 ✓ sig. —
Congenital left-sided heart lesions Spondylosis
2 genes
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DACH1(1), SUMF1(1)
0.037 0.080 1.07e-3 1.79e-3 ✓ sig. —
Atrioventricular block Retractile testis
1 gene
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1 of 1 corroborated by 2+ sources
GNAI2(2)
0.056 1.000 1.10e-3 1.83e-3 ✓ sig. —
Micrognathism Right aortic arch
1 gene
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BLTP1(1)
0.056 1.000 1.10e-3 1.83e-3 ✓ sig. —
Gaucher disease Riley-day syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ELP1(3)
0.056 1.000 1.10e-3 1.83e-3 ✓ sig. —
Micrognathism Satb2 associated syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SATB2(3)
0.056 1.000 1.10e-3 1.83e-3 ✓ sig. —
Congenital neutropenia SEC61A1 deficiency
1 gene
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1 of 1 corroborated by 2+ sources
SEC61A1(2)
0.056 1.000 1.10e-3 1.83e-3 ✓ sig. —
Cutaneous mastocytosis short-rib thoracic dysplasia 8 with or without polydactyly
1 gene
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1 of 1 corroborated by 2+ sources
DYNC2I1(2)
0.056 1.000 1.10e-3 1.83e-3 ✓ sig. —
Larsen syndrome skeletal dysplasia, mild, with joint laxity and advanced bone age
1 gene
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1 of 1 corroborated by 2+ sources
0.056 1.000 1.10e-3 1.83e-3 ✓ sig. Cluster 68 →
Coffin-siris syndrome SOX11-related complex neurodevelopmental disorder with or without congenital anomalies
1 gene
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1 of 1 corroborated by 2+ sources
SOX11(5)
0.056 1.000 1.10e-3 1.83e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.