Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Blomstrand lethal chondrodysplasia Pseudohypoparathyroidism
1 gene
Show details
1 of 1 corroborated by 2+ sources
PTH1R(2)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Brunet-wagner neurodevelopmental syndrome Rheumatic disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
RBL2(4)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Byzanthine arch palate Congenital pectus carinatum
1 gene
Show details
FBN1(1)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Byzanthine arch palate Coronary artery dissection
1 gene
Show details
FBN1(1)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
C9 deficiency Macular and posterior pole degeneration
1 gene
Show details
1 of 1 corroborated by 2+ sources
C9(3)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Café-au-lait macules Giant cell glioblastoma
1 gene
Show details
LZTR1(1)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Avoidant restrictive food intake disorder Carotid artery stenosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
APOE(2)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Hearing loss with hypertrophic cardiomyopathy Waardenburg syndrome
1 gene
Show details
MYO6(1)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Erythrocytosis Hemoglobin high altitude adaptation
1 gene
Show details
1 of 1 corroborated by 2+ sources
EGLN1(5)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Hengel maroofian schols syndrome Malunion fracture
1 gene
Show details
1 of 1 corroborated by 2+ sources
BCAS3(4)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. Cluster 287 →
Basal ganglia disease hereditary hyperferritinemia with congenital cataracts
1 gene
Show details
1 of 1 corroborated by 2+ sources
FTL(2)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
hereditary sensory and autonomic neuropathy type 4 Sensory neuropathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
NTRK1(2)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. Cluster 169 →
hereditary thrombocytopenia and hematologic cancer predisposition syndrome Platelet disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
RUNX1(2)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Homocystinuria Hyperhomocysteinemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
CBS(5)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Esophageal stenosis Hyperbilirubinemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
SOD2(2)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
hypomyelinating leukodystrophy 2 Lymphatic malformation
1 gene
Show details
1 of 1 corroborated by 2+ sources
GJC2(6)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Atypical femoral fracture Thoracic aortic aneurysm
2 genes
Show details
CNTN4(1), SMAD6(1)
0.037 0.111 8.39e-4 1.50e-3 ✓ sig. Cluster 66 →
Aortic dissection Atypical femoral fracture
2 genes
Show details
2 of 2 corroborated by 2+ sources
IL18R1(2), SLC9A4(2)
0.037 0.111 8.39e-4 1.50e-3 ✓ sig. Cluster 66 →
Congenital disorder of glycosylation Congenital myasthenic syndrome
3 genes
Show details
3 of 3 corroborated by 2+ sources
ALG2(7), ALG14(6), DPAGT1(8)
0.024 0.103 8.34e-4 1.50e-3 ✓ sig. —
Hypertriglyceridemia Williams syndrome
2 genes
Show details
2 of 2 corroborated by 2+ sources
BAZ1B(4), TBL2(3)
0.039 0.083 8.59e-4 1.52e-3 ✓ sig. —
Developmental regression Vesicoureteral reflux
2 genes
Show details
1 of 2 corroborated by 2+ sources
NDUFAF6(2), EBF3(1)
0.036 0.111 8.85e-4 1.57e-3 ✓ sig. Cluster 323 →
Pendred syndrome Usher syndrome type 1
1 gene
Show details
1 of 1 corroborated by 2+ sources
MYO7A(2)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
Gingival diseases Ventricular tachycardia
1 gene
Show details
1 of 1 corroborated by 2+ sources
ABCA5(4)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
Congenital septal defect of heart Vertebral anomalies with endocrine and t-cell dysfunction
1 gene
Show details
1 of 1 corroborated by 2+ sources
TBX2(5)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
Congenital deformity of clavicle X-linked centronuclear myopathy
1 gene
Show details
DNM2(1)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. Cluster 59 →

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.