Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Ankyloblepharon-ectodermal defects-cleft lip/palate Breast disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
TP63(6)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. Cluster 27 →
Breast disease Limb-mammary syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
TP63(5)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. Cluster 27 →
Brown oculocutaneous albinism Skin hair eye pigmentation variation
1 gene
Show details
1 of 1 corroborated by 2+ sources
OCA2(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Brunner syndrome Dysthymic disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
MAOA(5)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
C9 deficiency Terminal complement component deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
C9(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. Cluster 383 →
Carcinoid syndrome hereditary pheochromocytoma-paraganglioma
1 gene
Show details
1 of 1 corroborated by 2+ sources
SDHD(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. Cluster 81 →
Cardiac-urogenital syndrome Dextrocardia
1 gene
Show details
1 of 1 corroborated by 2+ sources
MYRF(6)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. Cluster 46 →
cardiomyopathy, dilated, 2l Distal muscular dystrophy
1 gene
Show details
1 of 1 corroborated by 2+ sources
LDB3(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Carotid intima-media thickness Generalized lipodystrophy
1 gene
Show details
PPARG(1)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. Cluster 71 →
Carotid intima-media thickness Follicular thyroid cancer
1 gene
Show details
1 of 1 corroborated by 2+ sources
PPARG(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Castleman disease Prediabetes
1 gene
Show details
1 of 1 corroborated by 2+ sources
IL6(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Hallervorden spatz syndrome Palmoplantar keratoderma with congenital alopecia
1 gene
Show details
1 of 1 corroborated by 2+ sources
GJA1(4)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. Cluster 92 →
Hallervorden spatz syndrome PLA2G6-associated neurodegeneration
1 gene
Show details
1 of 1 corroborated by 2+ sources
PLA2G6(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Hallervorden spatz syndrome Pantothenate kinase-associated neurodegeneration
1 gene
Show details
1 of 1 corroborated by 2+ sources
PANK2(4)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. Cluster 92 →
hearing loss, autosomal recessive 116 Pendred syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
CLDN9(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Carney complex Hecht syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
MYH8(5)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Heme oxygenase deficiency Intracranial vasospasm
1 gene
Show details
1 of 1 corroborated by 2+ sources
HMOX1(7)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. Cluster 371 →
Hemihyperplasia Russell-silver syndrome
1 gene
Show details
IGF2(1)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Hemimegalencephaly PTEN hamartoma tumor syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
PTEN(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Clapo syndrome Hemimegalencephaly
1 gene
Show details
1 of 1 corroborated by 2+ sources
PIK3CA(3)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
hemochromatosis type 1 Hepatic veno occlusive disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
HFE(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. Cluster 196 →
hemochromatosis type 2B Hereditary hemochromatosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
HAMP(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. Cluster 135 →
hemochromatosis type 2B Iron overload
1 gene
Show details
1 of 1 corroborated by 2+ sources
HAMP(3)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
hemochromatosis type 3 Hereditary hemochromatosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
TFR2(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. Cluster 135 →
hemochromatosis type 4 Hereditary hemochromatosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC40A1(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.