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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Distal axonal motor neuropathy-myofibrillar myopathy syndrome Distal muscular dystrophy
1 gene
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1 of 1 corroborated by 2+ sources
HSPB8(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Distal muscular dystrophy Hereditary axonal motor and sensory neuropathy
1 gene
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BICD2(1)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Distal muscular dystrophy distal myopathy with vocal cord weakness
1 gene
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1 of 1 corroborated by 2+ sources
MATR3(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
distal myopathy with vocal cord weakness Vogt-koyanagi-harada disease
1 gene
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1 of 1 corroborated by 2+ sources
MATR3(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. Cluster 1 →
46,xy sex reversal Dosage-sensitive sex reversal
1 gene
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1 of 1 corroborated by 2+ sources
NR0B1(3)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
DPAGT1-congenital disorder of glycosylation Tubular aggregate myopathy
1 gene
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1 of 1 corroborated by 2+ sources
DPAGT1(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. Cluster 217 →
Cerebellar diseases dyskeratosis congenita, autosomal dominant 3
1 gene
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1 of 1 corroborated by 2+ sources
TINF2(3)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. Cluster 130 →
Benign hereditary chorea Dyskinesia with orofacial involvement
1 gene
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1 of 1 corroborated by 2+ sources
ADCY5(6)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Benign hereditary chorea Dyskinesia, familial, with facial myokymia
1 gene
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1 of 1 corroborated by 2+ sources
ADCY5(3)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Dysthymic disorder Early-onset obesity-hyperphagia-severe developmental delay syndrome
1 gene
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1 of 1 corroborated by 2+ sources
NTRK2(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. Cluster 156 →
Dacryocystitis Dysthymic disorder
1 gene
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IL1RN(1)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Dysthymic disorder Sclerosis
1 gene
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1 of 1 corroborated by 2+ sources
IL1RN(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Dystrophinopathy Leiomyosarcoma
1 gene
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1 of 1 corroborated by 2+ sources
DMD(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. Cluster 213 →
Early-onset epilepsy-intellectual disability-brain anomalies syndrome Wolf-hirschhorn syndrome
1 gene
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1 of 1 corroborated by 2+ sources
PIGG(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. Cluster 159 →
East syndrome Pendred syndrome
1 gene
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1 of 1 corroborated by 2+ sources
KCNJ10(7)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
ectodermal dysplasia 10b, hypohidrotic/hair/tooth type, autosomal recessive Hypohidrotic ectodermal dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
EDAR(4)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. Cluster 117 →
ectodermal dysplasia 12, hypohidrotic/hair/tooth/nail type Hypohidrotic ectodermal dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
KDF1(4)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. Cluster 117 →
ectodermal dysplasia WNT10A related Hypohidrotic ectodermal dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
WNT10A(3)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Emery-dreifuss muscular dystrophy Severe lipodystrophic laminopathy
1 gene
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1 of 1 corroborated by 2+ sources
LMNA(6)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. Cluster 65 →
Dilated cardiomyopathy-hypergonadotropic hypogonadism syndrome Emery-dreifuss muscular dystrophy
1 gene
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1 of 1 corroborated by 2+ sources
LMNA(5)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. Cluster 65 →
Emery-dreifuss muscular dystrophy Lipoatrophic diabetes mellitus
1 gene
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1 of 1 corroborated by 2+ sources
LMNA(5)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. Cluster 65 →
Emery-dreifuss muscular dystrophy Malouf syndrome
1 gene
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1 of 1 corroborated by 2+ sources
LMNA(5)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. Cluster 65 →
Carney complex Enamel-renal syndrome
1 gene
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1 of 1 corroborated by 2+ sources
FAM20A(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Congenital venous anomaly EPHB4-associated vascular malformation spectrum
1 gene
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1 of 1 corroborated by 2+ sources
EPHB4(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —
Epidermodysplasia verruciformis severe combined immunodeficiency due to CORO1A deficiency
1 gene
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1 of 1 corroborated by 2+ sources
CORO1A(2)
0.125 1.000 4.55e-4 9.73e-4 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.