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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Bronchiolitis obliterans Yao syndrome
1 gene
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1 of 1 corroborated by 2+ sources
NOD2(3)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 382 →
Bronchiolitis obliterans Urinary retention
1 gene
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1 of 1 corroborated by 2+ sources
EDN1(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. —
Bronchus cancer dyskeratosis congenita, autosomal dominant 2
1 gene
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1 of 1 corroborated by 2+ sources
TERT(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 294 →
Bronchus cancer fanconi anemia complementation group d1
1 gene
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1 of 1 corroborated by 2+ sources
BRCA2(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. —
Buschke-ollendorff syndrome Tietz syndrome
1 gene
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1 of 1 corroborated by 2+ sources
LEMD3(4)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 175 →
Butterfly-shaped pigmentary macular dystrophy PRPH2-related retinopathy
1 gene
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1 of 1 corroborated by 2+ sources
PRPH2(3)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. —
Butterfly-shaped pigmentary macular dystrophy Diffuse gastric and lobular breast cancer syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CTNNA1(4)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. —
Butterfly-shaped pigmentary macular dystrophy Carasil syndrome
1 gene
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1 of 1 corroborated by 2+ sources
HTRA1(3)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. —
CACNA1F-related retinopathy Ocular albinism
1 gene
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1 of 1 corroborated by 2+ sources
CACNA1F(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 84 →
CACNA2D4-related retinopathy Retinal cone dystrophy
1 gene
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1 of 1 corroborated by 2+ sources
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 45 →
Carbohydrate metabolism disorder Triose phosphate isomerase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
TPI1(6)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 354 →
Carbohydrate metabolism disorder MPI-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
MPI(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 354 →
Carbohydrate metabolism disorder Transaldolase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
TALDO1(6)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 354 →
Castleman disease Glucose-6-phosphate dehydrogenase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
IL6(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. —
leukoencephalopathy with vanishing white matter 1 Vanishing white matter disease
1 gene
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1 of 1 corroborated by 2+ sources
EIF2B1(3)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 170 →
Congenital or early infantile cach syndrome leukoencephalopathy with vanishing white matter 2
1 gene
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1 of 1 corroborated by 2+ sources
EIF2B2(3)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 170 →
Cree leukoencephalopathy leukoencephalopathy with vanishing white matter 2
1 gene
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1 of 1 corroborated by 2+ sources
EIF2B2(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 170 →
leukoencephalopathy with vanishing white matter 2 Vanishing white matter disease
1 gene
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1 of 1 corroborated by 2+ sources
EIF2B2(3)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 170 →
leukoencephalopathy with vanishing white matter 3 Vanishing white matter disease
1 gene
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1 of 1 corroborated by 2+ sources
EIF2B3(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 170 →
Congenital or early infantile cach syndrome leukoencephalopathy with vanishing white matter 4
1 gene
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1 of 1 corroborated by 2+ sources
EIF2B4(3)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 170 →
Cree leukoencephalopathy leukoencephalopathy with vanishing white matter 4
1 gene
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1 of 1 corroborated by 2+ sources
EIF2B4(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 170 →
leukoencephalopathy with vanishing white matter 4 Vanishing white matter disease
1 gene
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1 of 1 corroborated by 2+ sources
EIF2B4(3)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 170 →
Congenital or early infantile cach syndrome leukoencephalopathy with vanishing white matter 5
1 gene
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1 of 1 corroborated by 2+ sources
EIF2B5(3)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 170 →
Cree leukoencephalopathy leukoencephalopathy with vanishing white matter 5
1 gene
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1 of 1 corroborated by 2+ sources
EIF2B5(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 170 →
leukoencephalopathy with vanishing white matter 5 Vanishing white matter disease
1 gene
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1 of 1 corroborated by 2+ sources
EIF2B5(3)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 170 →

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.