Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
ABCA4-related retinopathy Retinopathy background
1 gene
Show details
1 of 1 corroborated by 2+ sources
ABCA4(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Ablepharon macrostomia syndrome Focal facial dermal dysplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
TWIST2(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Aceruloplasminemia Apoceruloplasmin deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
CP(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 231 →
Acetyl-coa acetyltransferase deficiency Cytosolic acetoacetyl-coa thiolase deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
ACAT2(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Acetyl-coa acetyltransferase deficiency Beta-ketothiolase deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
ACAT1(6)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Acheiropody Triphalangeal thumb-polysyndactyly syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
LMBR1(4)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Acrocallosal syndrome Tibial hemimelia
1 gene
Show details
GLI3(1)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 142 →
Acrocallosal syndrome Cronkhite-canada syndrome
1 gene
Show details
GLI3(1)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 142 →
Acrocallosal syndrome greig cephalopolysyndactyly syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
GLI3(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 142 →
Acrodysostosis Chromosome 5q12 deletion syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
PDE4D(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Acrodysostosis Atrial myxoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
PRKAR1A(4)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Acromegaloid facial appearance syndrome Cantu syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
ABCC9(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 234 →
Acromegaly Chromosome xq26.3 duplication syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
GPR101(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 82 →
Acromegaly X-linked acrogigantism due to xq26 microduplication
1 gene
Show details
1 of 1 corroborated by 2+ sources
GPR101(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 82 →
Acroosteolysis Myeloproliferative disease, unclassifiable
1 gene
Show details
1 of 1 corroborated by 2+ sources
PDGFRB(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
ACTB-associated syndromic thrombocytopenia Baraitser-winter cerebrofrontofacial syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
ACTB(6)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 186 →
Adrenocortical carcinoma Central nervous system neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
TP53(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 3 →
Adrenocortical carcinoma Chromosome 17 deletion
1 gene
Show details
1 of 1 corroborated by 2+ sources
TP53(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 3 →
Adrenocortical carcinoma Vulvar lichen sclerosus
1 gene
Show details
1 of 1 corroborated by 2+ sources
TP53(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 3 →
Adrenoleukodystrophy X-linked cerebral adrenoleukodystrophy
1 gene
Show details
1 of 1 corroborated by 2+ sources
ABCD1(6)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Alagille syndrome Deafness with congenital heart defects and posterior embryotoxon
1 gene
Show details
1 of 1 corroborated by 2+ sources
JAG1(4)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 356 →
Alagille syndrome Hepatic ductular hypoplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
JAG1(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 356 →
Aland island eye disease Cone-rod dystrophy, x-linked
1 gene
Show details
1 of 1 corroborated by 2+ sources
CACNA1F(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 84 →
Aland island eye disease X-linked cone-rod dystrophy
1 gene
Show details
1 of 1 corroborated by 2+ sources
CACNA1F(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 84 →
Aldosterone-producing adenoma Brain compression
1 gene
Show details
1 of 1 corroborated by 2+ sources
CACNA1D(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 361 →

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.