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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
bardet-biedl syndrome 11 Sarcotubular myopathy
1 gene
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1 of 1 corroborated by 2+ sources
TRIM32(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Bart-pumphrey syndrome Keratitis ichthyosis hearing loss syndrome
1 gene
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1 of 1 corroborated by 2+ sources
GJB2(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 322 →
Beare-stevenson cutis gyrata syndrome Cutis gyrata syndrome
1 gene
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1 of 1 corroborated by 2+ sources
FGFR2(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 85 →
Beck-fahrner syndrome Intellectual developmental disorder dysmorphic facial hearing joint
1 gene
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1 of 1 corroborated by 2+ sources
TET3(6)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Becker nevus syndrome Congenital smooth muscle hamartoma
1 gene
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1 of 1 corroborated by 2+ sources
ACTB(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 186 →
Becker nevus syndrome Developmental malformations-deafness-dystonia syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ACTB(5)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 186 →
Becker nevus syndrome Dystonia-deafness syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ACTB(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 186 →
Benign concentric annular macular dystrophy IMPG1-related dominant retinopathy
1 gene
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1 of 1 corroborated by 2+ sources
IMPG1(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 303 →
Benign concentric annular macular dystrophy IMPG1-related recessive retinopathy
1 gene
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1 of 1 corroborated by 2+ sources
IMPG1(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 303 →
Benign congenital myopathy Dystrophinopathy
1 gene
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DMD(1)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 213 →
Benign congenital myopathy progressive muscular dystrophy
1 gene
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1 of 1 corroborated by 2+ sources
DMD(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 213 →
Benign essential blepharospasm Blepharospasm
1 gene
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1 of 1 corroborated by 2+ sources
DRD5(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Benign fasciculation-cramp syndrome Cramp-fasciculation syndrome
1 gene
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1 of 1 corroborated by 2+ sources
TRPA1(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 206 →
Benign samaritan congenital myopathy Central core disease
1 gene
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1 of 1 corroborated by 2+ sources
RYR1(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 326 →
Benign samaritan congenital myopathy Congenital multicore myopathy with external ophthalmoplegia
1 gene
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1 of 1 corroborated by 2+ sources
RYR1(5)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 326 →
Benign samaritan congenital myopathy RYR1-related myopathy
1 gene
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1 of 1 corroborated by 2+ sources
RYR1(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 326 →
Benta disease immunodeficiency 11b with atopic dermatitis
1 gene
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1 of 1 corroborated by 2+ sources
CARD11(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 327 →
Benta disease severe combined immunodeficiency due to CARD11 deficiency
1 gene
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1 of 1 corroborated by 2+ sources
CARD11(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 327 →
Beriberi Panniculitis
1 gene
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1 of 1 corroborated by 2+ sources
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 245 →
Beriberi Thiamine deficiency
1 gene
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1 of 1 corroborated by 2+ sources
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 245 →
Beta-aminoisobutyric aciduria Claudication
1 gene
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1 of 1 corroborated by 2+ sources
AGXT2(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Beta-propeller protein-associated neurodegeneration X-linked optic atrophy
1 gene
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1 of 1 corroborated by 2+ sources
WDR45(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 391 →
Beta-propeller protein-associated neurodegeneration X-linked cerebral cerebellar coloboma syndrome
1 gene
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1 of 1 corroborated by 2+ sources
WDR45(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 391 →
beta-thalassemia HBB/LCRB Cooleys anemia
1 gene
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1 of 1 corroborated by 2+ sources
HBB(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 19 →
beta-thalassemia HBB/LCRB Dominant beta-thalassemia
1 gene
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1 of 1 corroborated by 2+ sources
HBB(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 19 →

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.