Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene information from NCBI Gene database. Gene miRNA Other IDs Protein Associated diseases
Entrez ID	9881
Gene name	Tetratricopeptide repeat and ankyrin repeat containing 1
Gene symbol	TRANK1
Synonyms (NCBI Gene)	LBA1
Chromosome	3
Chromosome location	3p22.2

116

Show/Hide all (116)

miRTarBase ID	miRNA	Experiments	Reference
MIRT018157	hsa-miR-335-5p	Microarray	18185580
MIRT029736	hsa-miR-26b-5p	Microarray	19088304
MIRT1451652	hsa-miR-1202	CLIP-seq
MIRT1451653	hsa-miR-1255a	CLIP-seq
MIRT1451654	hsa-miR-1255b	CLIP-seq
MIRT1451655	hsa-miR-1297	CLIP-seq
MIRT1451656	hsa-miR-1343	CLIP-seq
MIRT1451657	hsa-miR-23a	CLIP-seq
MIRT1451658	hsa-miR-23b	CLIP-seq
MIRT1451659	hsa-miR-23c	CLIP-seq
MIRT1451660	hsa-miR-26a	CLIP-seq
MIRT1451661	hsa-miR-26b	CLIP-seq
MIRT1451662	hsa-miR-28-3p	CLIP-seq
MIRT1451663	hsa-miR-3074-5p	CLIP-seq
MIRT1451664	hsa-miR-3126-5p	CLIP-seq
MIRT1451665	hsa-miR-3133	CLIP-seq
MIRT1451666	hsa-miR-3136-3p	CLIP-seq
MIRT1451667	hsa-miR-3202	CLIP-seq
MIRT1451668	hsa-miR-3662	CLIP-seq
MIRT1451669	hsa-miR-3972	CLIP-seq
MIRT1451670	hsa-miR-3976	CLIP-seq
MIRT1451671	hsa-miR-4270	CLIP-seq
MIRT1451672	hsa-miR-4419a	CLIP-seq
MIRT1451673	hsa-miR-4441	CLIP-seq
MIRT1451674	hsa-miR-4450	CLIP-seq
MIRT1451675	hsa-miR-4465	CLIP-seq
MIRT1451676	hsa-miR-4475	CLIP-seq
MIRT1451677	hsa-miR-4510	CLIP-seq
MIRT1451678	hsa-miR-4652-3p	CLIP-seq
MIRT1451679	hsa-miR-4747-5p	CLIP-seq
MIRT1451680	hsa-miR-4755-3p	CLIP-seq
MIRT1451681	hsa-miR-4760-3p	CLIP-seq
MIRT1451682	hsa-miR-576-3p	CLIP-seq
MIRT1451683	hsa-miR-589	CLIP-seq
MIRT2135203	hsa-miR-1	CLIP-seq
MIRT2135204	hsa-miR-1184	CLIP-seq
MIRT2135205	hsa-miR-1205	CLIP-seq
MIRT2135206	hsa-miR-1207-5p	CLIP-seq
MIRT1451653	hsa-miR-1255a	CLIP-seq
MIRT1451654	hsa-miR-1255b	CLIP-seq
MIRT2135207	hsa-miR-1301	CLIP-seq
MIRT2135208	hsa-miR-143	CLIP-seq
MIRT2135209	hsa-miR-15a	CLIP-seq
MIRT2135210	hsa-miR-15b	CLIP-seq
MIRT2135211	hsa-miR-16	CLIP-seq
MIRT2135212	hsa-miR-195	CLIP-seq
MIRT2135213	hsa-miR-204	CLIP-seq
MIRT2135214	hsa-miR-206	CLIP-seq
MIRT2135215	hsa-miR-211	CLIP-seq
MIRT2135216	hsa-miR-224	CLIP-seq
MIRT1451664	hsa-miR-3126-5p	CLIP-seq
MIRT2135217	hsa-miR-3150b-3p	CLIP-seq
MIRT2135218	hsa-miR-3170	CLIP-seq
MIRT2135219	hsa-miR-3670	CLIP-seq
MIRT2135220	hsa-miR-3673	CLIP-seq
MIRT2135221	hsa-miR-3688-5p	CLIP-seq
MIRT2135222	hsa-miR-3938	CLIP-seq
MIRT2135223	hsa-miR-424	CLIP-seq
MIRT2135224	hsa-miR-4263	CLIP-seq
MIRT2135225	hsa-miR-4302	CLIP-seq
MIRT1451672	hsa-miR-4419a	CLIP-seq
MIRT1451677	hsa-miR-4510	CLIP-seq
MIRT2135226	hsa-miR-4519	CLIP-seq
MIRT2135227	hsa-miR-4660	CLIP-seq
MIRT2135228	hsa-miR-4671-5p	CLIP-seq
MIRT2135229	hsa-miR-4689	CLIP-seq
MIRT2135230	hsa-miR-4722-5p	CLIP-seq
MIRT2135231	hsa-miR-4736	CLIP-seq
MIRT2135232	hsa-miR-4755-5p	CLIP-seq
MIRT2135233	hsa-miR-4763-3p	CLIP-seq
MIRT2135234	hsa-miR-4768-3p	CLIP-seq
MIRT2135235	hsa-miR-4770	CLIP-seq
MIRT2135236	hsa-miR-4784	CLIP-seq
MIRT2135237	hsa-miR-497	CLIP-seq
MIRT2135238	hsa-miR-5047	CLIP-seq
MIRT2135239	hsa-miR-545	CLIP-seq
MIRT2135240	hsa-miR-613	CLIP-seq
MIRT2135241	hsa-miR-623	CLIP-seq
MIRT2135242	hsa-miR-625	CLIP-seq
MIRT2135243	hsa-miR-644	CLIP-seq
MIRT2135206	hsa-miR-1207-5p	CLIP-seq
MIRT2135208	hsa-miR-143	CLIP-seq
MIRT2356354	hsa-miR-149	CLIP-seq
MIRT2135209	hsa-miR-15a	CLIP-seq
MIRT2135210	hsa-miR-15b	CLIP-seq
MIRT2135211	hsa-miR-16	CLIP-seq
MIRT2135212	hsa-miR-195	CLIP-seq
MIRT1451664	hsa-miR-3126-5p	CLIP-seq
MIRT2135221	hsa-miR-3688-5p	CLIP-seq
MIRT2135223	hsa-miR-424	CLIP-seq
MIRT2135225	hsa-miR-4302	CLIP-seq
MIRT1451672	hsa-miR-4419a	CLIP-seq
MIRT1451677	hsa-miR-4510	CLIP-seq
MIRT2135230	hsa-miR-4722-5p	CLIP-seq
MIRT2135231	hsa-miR-4736	CLIP-seq
MIRT2135233	hsa-miR-4763-3p	CLIP-seq
MIRT2135234	hsa-miR-4768-3p	CLIP-seq
MIRT2135235	hsa-miR-4770	CLIP-seq
MIRT2135237	hsa-miR-497	CLIP-seq
MIRT2135239	hsa-miR-545	CLIP-seq
MIRT2356355	hsa-miR-548p	CLIP-seq
MIRT2135243	hsa-miR-644	CLIP-seq
MIRT2135206	hsa-miR-1207-5p	CLIP-seq
MIRT2135208	hsa-miR-143	CLIP-seq
MIRT1451664	hsa-miR-3126-5p	CLIP-seq
MIRT2135221	hsa-miR-3688-5p	CLIP-seq
MIRT2135225	hsa-miR-4302	CLIP-seq
MIRT1451672	hsa-miR-4419a	CLIP-seq
MIRT1451677	hsa-miR-4510	CLIP-seq
MIRT2135226	hsa-miR-4519	CLIP-seq
MIRT2135230	hsa-miR-4722-5p	CLIP-seq
MIRT2135231	hsa-miR-4736	CLIP-seq
MIRT2135233	hsa-miR-4763-3p	CLIP-seq
MIRT2135234	hsa-miR-4768-3p	CLIP-seq
MIRT2135235	hsa-miR-4770	CLIP-seq
MIRT2135243	hsa-miR-644	CLIP-seq

MIM	HGNC	e!Ensembl
619316	29011	ENSG00000168016

O15050

Protein name

TPR and ankyrin repeat-containing protein 1 (Lupus brain antigen 1 homolog)

Family and domains

Sequence

MWDPRAARVPPRDLAVLLCNKSNAFFSLGKWNEAFVAAKECLQWDPTYVKGYYRAGYSLL
RLHQPYEAARMFFEGLRLVQRSQDQAPVADFLVGVFTTMSSDSIVLQSFLPCFDHIFTTG
FPTEVWQSVIEKLAKKGLWHSFLLLSAKKDRLPRNIHVPELSLKSLFEKYVFIGLYEKME
QVPKLVQWLISIGASVETIGPYPLHALMRLCIQARENHLFRWLMDHKPEWKGRINQKDGD
GCTVLHVVAAHSPGYLVKRQTEDVQMLLRFGADPTLLDRQSRSVVDVLKRNKNFKAIEKI
NSHLEKLATCSKDLSGFSNGDGPTSENDIFRKVLEQLVKYMNSGNRLLHKNFLKQEVVQR
FLRLLSTLQEIPPDLVCDINQDCATTVFKFLLEKQRWPEVLLLLTRKVSGEPPLGDCLIK
DCNFSDLDICTIIPHLSTWDQRKKQLLGCLIDSGALPDGLQESQERPVVTCLKHEDFELA
FLLLTKGADPRAISLTEGDTPLHAALHIFLEIKADIGFSFLSHLLDLFWSNPTEFDYLNP
NVQDSNGNTLMHILFQKGMLKRVKKLLDLLVKFDINFNLKNKEGKDARHRIKKNDSLLLA
WNKALMENRRRSRQDSAAHLGKLSKSTAPGHTSQLKSQGSFKSVPCGATARTLPEGSAVP
DSWETLPGTQVTRKEPGALRPCSLRDCLMQDITVLIQQVEVDPSFPEDCLQSSEPLEAGA
GKEGKKDDKPTLGAGAPDCSEVGEGHAQVGLGALQLVPDDNRGKEGNDDQDDWSTQEIEA
CLQDFDNMTWEIECTSEMLKKLSSKVMTKVIKKKIILAIQQLGNGEWTQGLQKRLKHLKG
SIQLFEAKLDKGARMLWELAIDFSPRCSENPEKIIATEQNTCAMEKSGRIYTEIIRIWDI
VLDHCKLADSIKAICNAYNRGLSCVLRKKLKGINKGQVSANMKIQKRIPRCYVEDTEAEK
GREHVNPEYFPPASAVETEYNIMKFHSFSTNMAFNILNDTTATVEYPFRVGELEYAVIDL
NPRPLEPIILIGRSGTGKTTCCLYRLWKKFHVYWEKAEQAGSPLLAKQVWLKRRLEVEPG
KESPGGEEEEEEEDEEEEDSIEVETVESIDEQEYEACAGGAGVEPAGDGQAAEVCAPEHP
HQLEHLHQIFVTKNHVLCQEVQRNFIELSKSTKATSHYKPLDPNIHKLQDLRDENFPLFV
TSKQLLLLLDASLPKPFFLRNEDGSLKRTIIGWSAQEESTIPSWQEDEEEAEVDGDYSEE
DKAVEMRTGDSDPRVYVTFEVFKNEIWPKMTKGRTAYNPALIWKEIKSFLKGSFEALSCP
HGRLTEEVYKKLGRKRCPNFKEDRSEIYSLFSLYQQIRSQKGYFDEEDVLYNISRRLSKL
RVLPWSIHELYGDEIQDFTQAELALLMKCINDPNSMFLTGDTAQSIMKGVAFRFSDLRSL
FHYASRNTIDKQCAVRKPKKIHQLYQNYRSHSGILNLASGVVDLLQFYFPESFDRLPRDS
GLFDGPKPTVLESCSVSDLAILLRGNKRKTQPIEFGAHQVILVANETAKEKIPEELGLAL
VLTIYEAKGLEFDDVLLYNFFTDSEAYKEWKIISSFTPTSTDSREENRPLVEVPLDKPGS
SQGRSLMVNPEMYKLLNGELKQLYTAITRARVNLWIFDENREKRAPAFKYFIRRDFVQVV
KTDENKDFDDSMFVKTSTPAEWIAQGDYYAKHQCWKVAAKCYQKGGAFEKEKLALAHDTA
LSMKSKKVSPKEKQLEYLELAKTYLECKEPTLSLKCLSYAKEFQLSAQLCERLGKIRDAA
YFYKRSQCYKDAFRCFEQIQEFDLALKMYCQEELFEEAAIAVEKYEEMLKTKTLPISKLS
YSASQFYLEAAAKYLSANKMKEMMAVLSKLDIEDQLVFLKSRKRLAEAADLLNREGRREE
AALLMKQHGCLLEAARLTADKDFQASCLLGAARLNVARDSDIEHTKDILREALDICYQTG
QLSGIAEAHFLQGVILRDFQKLRDAFFKFDTLNHSAGVVEALYEAASQCEAEPEKILGLA
PGGLEILLSLVRALKRVTNNAEKEMVKSCFEFFGISQVDAKYCQIAQNDPGPILRIIFDL
DLNLREKKTKDHFLIMTDQVKLALNKHLLGRLCQITRSLLGKTYRGVCMRFIVGLKCEDE
NCEHFHRPLRRCEAKCLVQSKMNLVAINGLLLEAKKVFPKILAEELKEIDYILSTDMYGL
CKSILDVLFPKHFHQRVLSENPMACKEILKPNYKSFRFYRFALKEYIHFLFENESARNRR
ESTDLWLSAMQAFLLSSNYPEEFEKLLHQEEDNYNRELKALESEKDERGRGRGSRIKGIE
GKFGMLAPNRDDENMDKTHLCFIRLLENCIDQFYVYRNPEDYKRLFFRFMNVLIKRCKEP
LIPSIGNTVALLEFQFIHCGVVLARLWKNVILCLPKSYIALLHYWEFLFSKKDKELGDVF
SIIQEYKPKDVTRAIQDFRFHLSYLAKVLCGYENVNFNVLLDAFSEIDYVVSGEAERTLV
LCLVMLVNAEEILQPYCKPLLYRHFREIESRLQLMSMDCPGQVPERLLKVVKRVLVAVNV
KSVAEALQDLLFERDEEYLMDCDWRWDPVHTKGSIVRGLYYEEVRLNRLLCLDPVDYFAE
PECEFGQDEMDELALEDRDHVLATILSQKQRKASIQRKLRRACLVVSLCISWRRRVGTQM
ERVREEAREPRAGNFKKADVDRTQCDLCGVKFTRGPENYFSPSKAFEGAASEVAVLSRAE
LEREECQERNSESYEQHIHLEHHQRQQVAYQKYSEFFHEKVDPAIDEGKLVVQDIEQSVW
IHSHVGSKEHSHMLQKVQEHIKRVSDMVEDLYRRKAWAGAEEAMTRLVNILILSVRDARD
WLMKTETRLKKEGIVQEDDYENEVEDFGELRPRRRSRKCGKQRKY

Sequence length

2925

Interactions

View interactions

Show/Hide Unknown Diseases (2)

Phenotype Name	Clinical Significance	dbSNP ID	RCV Accession
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Autism	Uncertain significance	rs572969997, rs576929484	RCV003328501 RCV003328508
Autism spectrum disorder	association	rs2078720428, rs368536894	RCV001291339 RCV001291338

Show/Hide Text Mining Associations (7)

Disease Name	Relationship Type	References
Associations from Text MiningDisease associations identified through Pubtator
Bipolar Disorder	Associate	24280982, 24618891, 28115744, 28166306, 33737391, 40562893
Breast Neoplasms	Associate	26474971
Kleine Levin Syndrome	Associate	33737391
Mental Disorders	Associate	30135510
Mobility Limitation	Associate	33737391
Niemann Pick Disease Type C	Associate	30135510
Schizophrenia	Associate	33737391

TRANK1 (tetratricopeptide repeat and ankyrin repeat containing 1)