Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	9753
Gene name Gene Name - the full gene name approved by the HGNC.	Zinc finger and SCAN domain containing 12
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	ZSCAN12
Synonyms (NCBI Gene) Gene synonyms aliases	ZFP96, ZNF29K1, ZNF305, ZNF96, dJ29K1.2
Chromosome Chromosome number	6
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	6p22.1

Show/Hide all(105)

miRTarBase ID	miRNA	Experiments	Reference
MIRT028303	hsa-miR-32-5p	Sequencing	20371350
MIRT544414	hsa-miR-548ae-3p	PAR-CLIP	21572407
MIRT544413	hsa-miR-548ah-3p	PAR-CLIP	21572407
MIRT544412	hsa-miR-548aj-3p	PAR-CLIP	21572407
MIRT544411	hsa-miR-548am-3p	PAR-CLIP	21572407
MIRT544410	hsa-miR-548aq-3p	PAR-CLIP	21572407
MIRT544409	hsa-miR-548j-3p	PAR-CLIP	21572407
MIRT544408	hsa-miR-548x-3p	PAR-CLIP	21572407
MIRT317365	hsa-miR-5582-3p	PAR-CLIP	21572407
MIRT544407	hsa-miR-4311	PAR-CLIP	21572407
MIRT544406	hsa-miR-25-3p	PAR-CLIP	21572407
MIRT028303	hsa-miR-32-5p	PAR-CLIP	21572407
MIRT544405	hsa-miR-363-3p	PAR-CLIP	21572407
MIRT544404	hsa-miR-367-3p	PAR-CLIP	21572407
MIRT544403	hsa-miR-92a-3p	PAR-CLIP	21572407
MIRT544402	hsa-miR-92b-3p	PAR-CLIP	21572407
MIRT544401	hsa-miR-6515-3p	PAR-CLIP	21572407
MIRT544400	hsa-miR-1236-3p	PAR-CLIP	21572407
MIRT544399	hsa-miR-4753-3p	PAR-CLIP	21572407
MIRT544398	hsa-miR-653-5p	PAR-CLIP	21572407
MIRT544397	hsa-miR-6809-3p	PAR-CLIP	21572407
MIRT544414	hsa-miR-548ae-3p	PAR-CLIP	21572407
MIRT544413	hsa-miR-548ah-3p	PAR-CLIP	21572407
MIRT544412	hsa-miR-548aj-3p	PAR-CLIP	21572407
MIRT544411	hsa-miR-548am-3p	PAR-CLIP	21572407
MIRT544410	hsa-miR-548aq-3p	PAR-CLIP	21572407
MIRT544409	hsa-miR-548j-3p	PAR-CLIP	21572407
MIRT544408	hsa-miR-548x-3p	PAR-CLIP	21572407
MIRT317365	hsa-miR-5582-3p	PAR-CLIP	21572407
MIRT544407	hsa-miR-4311	PAR-CLIP	21572407
MIRT544406	hsa-miR-25-3p	PAR-CLIP	21572407
MIRT028303	hsa-miR-32-5p	PAR-CLIP	21572407
MIRT544405	hsa-miR-363-3p	PAR-CLIP	21572407
MIRT544404	hsa-miR-367-3p	PAR-CLIP	21572407
MIRT544403	hsa-miR-92a-3p	PAR-CLIP	21572407
MIRT544402	hsa-miR-92b-3p	PAR-CLIP	21572407
MIRT544401	hsa-miR-6515-3p	PAR-CLIP	21572407
MIRT544400	hsa-miR-1236-3p	PAR-CLIP	21572407
MIRT544399	hsa-miR-4753-3p	PAR-CLIP	21572407
MIRT544398	hsa-miR-653-5p	PAR-CLIP	21572407
MIRT544397	hsa-miR-6809-3p	PAR-CLIP	21572407
MIRT544414	hsa-miR-548ae-3p	PAR-CLIP	21572407
MIRT544413	hsa-miR-548ah-3p	PAR-CLIP	21572407
MIRT544412	hsa-miR-548aj-3p	PAR-CLIP	21572407
MIRT544411	hsa-miR-548am-3p	PAR-CLIP	21572407
MIRT544410	hsa-miR-548aq-3p	PAR-CLIP	21572407
MIRT544409	hsa-miR-548j-3p	PAR-CLIP	21572407
MIRT544408	hsa-miR-548x-3p	PAR-CLIP	21572407
MIRT317365	hsa-miR-5582-3p	PAR-CLIP	21572407
MIRT544407	hsa-miR-4311	PAR-CLIP	21572407
MIRT544406	hsa-miR-25-3p	PAR-CLIP	21572407
MIRT028303	hsa-miR-32-5p	PAR-CLIP	21572407
MIRT544405	hsa-miR-363-3p	PAR-CLIP	21572407
MIRT544404	hsa-miR-367-3p	PAR-CLIP	21572407
MIRT544403	hsa-miR-92a-3p	PAR-CLIP	21572407
MIRT544402	hsa-miR-92b-3p	PAR-CLIP	21572407
MIRT544401	hsa-miR-6515-3p	PAR-CLIP	21572407
MIRT544400	hsa-miR-1236-3p	PAR-CLIP	21572407
MIRT544399	hsa-miR-4753-3p	PAR-CLIP	21572407
MIRT544398	hsa-miR-653-5p	PAR-CLIP	21572407
MIRT544397	hsa-miR-6809-3p	PAR-CLIP	21572407
MIRT544414	hsa-miR-548ae-3p	PAR-CLIP	21572407
MIRT544413	hsa-miR-548ah-3p	PAR-CLIP	21572407
MIRT544412	hsa-miR-548aj-3p	PAR-CLIP	21572407
MIRT544411	hsa-miR-548am-3p	PAR-CLIP	21572407
MIRT544410	hsa-miR-548aq-3p	PAR-CLIP	21572407
MIRT544409	hsa-miR-548j-3p	PAR-CLIP	21572407
MIRT544408	hsa-miR-548x-3p	PAR-CLIP	21572407
MIRT317365	hsa-miR-5582-3p	PAR-CLIP	21572407
MIRT544407	hsa-miR-4311	PAR-CLIP	21572407
MIRT544406	hsa-miR-25-3p	PAR-CLIP	21572407
MIRT028303	hsa-miR-32-5p	PAR-CLIP	21572407
MIRT544405	hsa-miR-363-3p	PAR-CLIP	21572407
MIRT544404	hsa-miR-367-3p	PAR-CLIP	21572407
MIRT544403	hsa-miR-92a-3p	PAR-CLIP	21572407
MIRT544402	hsa-miR-92b-3p	PAR-CLIP	21572407
MIRT544401	hsa-miR-6515-3p	PAR-CLIP	21572407
MIRT544400	hsa-miR-1236-3p	PAR-CLIP	21572407
MIRT544399	hsa-miR-4753-3p	PAR-CLIP	21572407
MIRT544398	hsa-miR-653-5p	PAR-CLIP	21572407
MIRT544397	hsa-miR-6809-3p	PAR-CLIP	21572407
MIRT1543521	hsa-miR-3117-3p	CLIP-seq
MIRT1543522	hsa-miR-3155	CLIP-seq
MIRT1543523	hsa-miR-3155b	CLIP-seq
MIRT1543524	hsa-miR-3162-5p	CLIP-seq
MIRT1543525	hsa-miR-3169	CLIP-seq
MIRT1543526	hsa-miR-3942-3p	CLIP-seq
MIRT1543527	hsa-miR-4481	CLIP-seq
MIRT1543528	hsa-miR-4654	CLIP-seq
MIRT1543529	hsa-miR-4745-5p	CLIP-seq
MIRT1543530	hsa-miR-4758-5p	CLIP-seq
MIRT1543531	hsa-miR-4759	CLIP-seq
MIRT1543532	hsa-miR-4769-5p	CLIP-seq
MIRT1543533	hsa-miR-484	CLIP-seq
MIRT1543534	hsa-miR-563	CLIP-seq
MIRT1543535	hsa-miR-579	CLIP-seq
MIRT1543536	hsa-miR-659	CLIP-seq
MIRT1543537	hsa-miR-664	CLIP-seq
MIRT1543538	hsa-miR-892a	CLIP-seq
MIRT2383168	hsa-miR-1245b-5p	CLIP-seq
MIRT2383169	hsa-miR-3142	CLIP-seq
MIRT2383170	hsa-miR-335	CLIP-seq
MIRT2383171	hsa-miR-4277	CLIP-seq
MIRT2383172	hsa-miR-513c	CLIP-seq
MIRT2383173	hsa-miR-514b-5p	CLIP-seq

Show/Hide all(6)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000978	Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA	21873635
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA	21873635
GO:0005515	Function	Protein binding	IPI	25416956, 32296183, 32814053
GO:0005634	Component	Nucleus	IEA
GO:0006357	Process	Regulation of transcription by RNA polymerase II	IBA	21873635
GO:0046872	Function	Metal ion binding	IEA

MIM	HGNC	e!Ensembl
603978	13172	ENSG00000158691

Protein

UniProt ID

O43309

Protein name

Zinc finger and SCAN domain-containing protein 12 (Zinc finger protein 305) (Zinc finger protein 96)

Protein function

May be involved in transcriptional regulation.

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF02023	SCAN	42 → 131	SCAN domain	Domain
PF00096	zf-C2H2	274 → 296	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	302 → 324	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	330 → 352	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	358 → 380	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	386 → 408	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	414 → 437	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	442 → 463	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	469 → 491	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	497 → 519	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	525 → 547	Zinc finger, C2H2 type	Domain

Sequence

MASTWAIQAHMDQDEPLEVKIEEEKYTTRQDWDLRKNNTHSREVFRQYFRQFCYQETSGP
REALSRLRELCHQWLRPETHTKEQILELLVLEQFLTILPEELQAWVQEQHPESGEEVVTV
LEDLERELDEPGEQVSVHTGEQEMFLQETVRLRKEGEPSMSLQSMKAQPKYESPELESQQ
EQVLDVETGNEYGNLKQEVSEEMEPHGKTSSKFENDMSKSARCGETREPEEITEEPSACS
REDKQPTCDENGVSLTENSDHTEHQRICPGEESYGCDDCGKAFSQHSHLIEHQRIHTGDR
PYKCEECGKAFRGRTVLIRHKIIHTGEKPYKCNECGKAFGRWSALNQHQRLHTGEKHYHC
NDCGKAFSQKAGLFHHIKIHTRDKPYQCTQCNKSFSRRSILTQHQGVHTGAKPYECNECG
KAFVYNSSLVSHQEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCDVCEKAFIQ
RTSLTEHQRIHTGERPYKCDKCGKAFTQRSVLTEHQRIHTGERPYKCDECGNAFRGITSL
IQHQRIHTGEKPYQCDECGKAFRQRKKTSYKEILLKNHSEPQAGVNLLLSSLIPEWQSCF
RRDL

Sequence length

604

Interactions

View interactions

Show/Hide Causal Diseases (1)

Disease term	Disease name	dbSNP ID	References
Causal
Lung carcinoma	Squamous cell carcinoma of lung	rs1805076, rs121909071, rs121913530, rs112445441, rs121913529, rs121913535, rs121913297, rs121913279, rs104886003, rs397516975, rs11554290, rs121913364, rs121913351, rs121913369, rs121913355 View all (44 more)	28604730

Show/Hide Unknown Diseases (3)

Disease term	Disease name	References	Source
Unknown
Sarcoidosis	Sarcoidosis	26651848	ClinVar
Mental Depression	Mental Depression		GWAS
Neuroticism	Neuroticism		GWAS

Show/Hide Text Mining Associations (6)

Disease Name	Relationship Type	References
Associations from Text Mining
Endometrial Neoplasms	Associate	36001862
Lymphoma Large B Cell Diffuse	Associate	32219808
Neoplasms	Associate	35039565
Ovarian Neoplasms	Associate	32332753
Prostatitis	Associate	27142338
Stomach Neoplasms	Associate	35039565

ZSCAN12 (zinc finger and SCAN domain containing 12)