Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
9728
Gene name Gene Name - the full gene name approved by the HGNC.
SECIS binding protein 2 like
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
SECISBP2L
Synonyms (NCBI Gene) Gene synonyms aliases
SBP2L, SLAN
Chromosome Chromosome number
15
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
15q21.1
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT020145 hsa-miR-130b-3p Sequencing 20371350
MIRT025998 hsa-miR-148a-3p Sequencing 20371350
MIRT031119 hsa-miR-19b-3p Sequencing 20371350
MIRT437666 hsa-miR-21-5p Microarray, qRT-PCR 22815788
MIRT437689 hsa-miR-223-3p Microarray, qRT-PCR 22815788
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0001514 Process Selenocysteine incorporation IBA 21873635
GO:0003723 Function RNA binding HDA 22658674, 22681889
GO:0003730 Function MRNA 3'-UTR binding IBA 21873635
GO:0005515 Function Protein binding IPI 25416956
GO:0035368 Function Selenocysteine insertion sequence binding IBA 21873635
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
615756 28997 ENSG00000138593
Protein
UniProt ID Q93073
Protein name Selenocysteine insertion sequence-binding protein 2-like (SECIS-binding protein 2-like)
Protein function Binds SECIS (Sec insertion sequence) elements present on selenocysteine (Sec) protein mRNAs, but does not promote Sec incorporation into selenoproteins in vitro.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01248 Ribosomal_L7Ae 702 804 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Domain
Sequence
MDRAPTEQNVKLSAEVEPFIPQKKSPDTFMIPMALPNDNGSVSGVEPTPIPSYLITCYPF
VQENQSNRQFPLYNNDIRWQQPNPNPTGPYFAYPIISAQPPVSTEYTYYQLMPAPCAQVM
GFYHPFPTPYSNTFQAANTVNAITTECTERPSQLGQVFPLSSHRSRNSNRGSVVPKQQLL
QQHIKSKRPLVKNVATQKETNAAGPDSRSKIVLLVDASQQTDFPSDIANKSLSETTATML
WKSKGRRRRASHPTAESSSEQGASEADIDSDSGYCSPKHSNNQPAAGALRNPDSGTMNHV
ESSMCAGGVNWSNVTCQATQKKPWMEKNQTFSRGGRQTEQRNNSQVGFRCRGHSTSSERR
QNLQKRPDNKHLSSSQSHRSDPNSESLYFEDEDGFQELNENGNAKDENIQQKLSSKVLDD
LPENSPINIVQTPIPITTSVPKRAKSQKKKALAAALATAQEYSEISMEQKKLQEALSKAA
GKKNKTPVQLDLGDMLAALEKQQQAMKARQITNTRPLSYTVVTAASFHTKDSTNRKPLTK
SQPCLTSFNSVDIASSKAKKGKEKEIAKLKRPTALKKVILKEREEKKGRLTVDHNLLGSE
EPTEMHLDFIDDLPQEIVSQEDTGLSMPSDTSLSPASQNSPYCMTPVSQGSPASSGIGSP
MASSTITKIHSKRFREYCNQVLCKEIDECVTLLLQELVSFQERIYQKDPVRAKARRRLVM
GLREVTKHMKLNKIKCVIISPNCEKIQSKGGLDEALYNVIAMAREQEIPFVFALGRKALG
RCVNKLVPVSVVGIFNYFGAESLF
NKLVELTEEARKAYKDMVAAMEQEQAEEALKNVKKV
PHHMGHSRNPSAASAISFCSVISEPISEVNEKEYETNWRNMVETSDGLEASENEKEVSCK
HSTSEKPSKLPFDTPPIGKQPSLVATGSTTSATSAGKSTASDKEEVKPDDLEWASQQSTE
TGSLDGSCRDLLNSSITSTTSTLVPGMLEEEEDEDEEEEEDYTHEPISVEVQLNSRIESW
VSETQRTMETLQLGKTLNGSEEDNVEQSGEEEAEAPEVLEPGMDSEAWTADQQASPGQQK
SSNCSSLNKEHSDSNYTTQTT
Sequence length 1101
Interactions View interactions
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Lung cancer Malignant neoplasm of lung rs121913530, rs121913529, rs878855122, rs1057519784, rs770315135 28604730
Lung carcinoma Carcinoma of lung rs1805076, rs121909071, rs121913530, rs112445441, rs121913529, rs121913535, rs121913297, rs121913279, rs104886003, rs397516975, rs11554290, rs121913364, rs121913351, rs121913369, rs121913355
View all (44 more)
28604730
Unknown
Disease term Disease name Evidence References Source
Lung adenocarcinoma Lung adenocarcinoma Validation that loss of Tgfbr2 results in more aggressive and T cell-excluded KP lung tumors GWAS, CBGDA
Schizophrenia Schizophrenia GWAS
Associations from Text Mining
Disease Name Relationship Type References
Glioma Associate 36768201
HIV Infections Associate 32903610
Leukemia Lymphocytic Chronic B Cell Associate 35328450
Lung Diseases Associate 21566536
Lung Neoplasms Inhibit 21566536
Lung Neoplasms Associate 31314582
Lymphoma Associate 31919622
Neoplasms Associate 21566536, 31919622
Neoplasms Inhibit 31314582
Neutropenia Associate 38039514