Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein Pathways Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	9672
Gene name Gene Name - the full gene name approved by the HGNC.	Syndecan 3
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	SDC3
Synonyms (NCBI Gene) Gene synonyms aliases	SDCN, SYND3
Chromosome Chromosome number	1
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	1p35.2
Summary Summary of gene provided in NCBI Entrez Gene.	The protein encoded by this gene belongs to the syndecan proteoglycan family. It may play a role in the organization of cell shape by affecting the actin cytoskeleton, possibly by transferring signals from the cell surface in a sugar-dependent mechanism.

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miRTarBase ID	miRNA	Experiments	Reference
MIRT018892	hsa-miR-335-5p	Microarray	18185580
MIRT030232	hsa-miR-26b-5p	Microarray	19088304
MIRT446638	hsa-miR-654-3p	PAR-CLIP	22100165
MIRT446637	hsa-miR-4677-3p	PAR-CLIP	22100165
MIRT446635	hsa-miR-4679	PAR-CLIP	22100165
MIRT446636	hsa-miR-190a-5p	PAR-CLIP	22100165
MIRT446634	hsa-miR-190b	PAR-CLIP	22100165
MIRT446633	hsa-miR-509-3p	PAR-CLIP	22100165
MIRT446632	hsa-miR-431-5p	PAR-CLIP	22100165
MIRT446631	hsa-miR-3689a-5p	PAR-CLIP	22100165
MIRT446630	hsa-miR-3689b-5p	PAR-CLIP	22100165
MIRT446629	hsa-miR-3689e	PAR-CLIP	22100165
MIRT446628	hsa-miR-3689f	PAR-CLIP	22100165
MIRT446627	hsa-miR-124-5p	PAR-CLIP	22100165
MIRT446638	hsa-miR-654-3p	PAR-CLIP	22100165
MIRT446637	hsa-miR-4677-3p	PAR-CLIP	22100165
MIRT446635	hsa-miR-4679	PAR-CLIP	22100165
MIRT446636	hsa-miR-190a-5p	PAR-CLIP	22100165
MIRT446634	hsa-miR-190b	PAR-CLIP	22100165
MIRT446633	hsa-miR-509-3p	PAR-CLIP	22100165
MIRT446632	hsa-miR-431-5p	PAR-CLIP	22100165
MIRT446631	hsa-miR-3689a-5p	PAR-CLIP	22100165
MIRT446630	hsa-miR-3689b-5p	PAR-CLIP	22100165
MIRT446629	hsa-miR-3689e	PAR-CLIP	22100165
MIRT446628	hsa-miR-3689f	PAR-CLIP	22100165
MIRT446627	hsa-miR-124-5p	PAR-CLIP	22100165
MIRT439694	hsa-miR-218-5p	HITS-CLIP	23212916
MIRT439694	hsa-miR-218-5p	HITS-CLIP	23212916
MIRT446638	hsa-miR-654-3p	PAR-CLIP	22100165
MIRT446637	hsa-miR-4677-3p	PAR-CLIP	22100165
MIRT446635	hsa-miR-4679	PAR-CLIP	22100165
MIRT446636	hsa-miR-190a-5p	PAR-CLIP	22100165
MIRT446634	hsa-miR-190b	PAR-CLIP	22100165
MIRT446633	hsa-miR-509-3p	PAR-CLIP	22100165
MIRT446632	hsa-miR-431-5p	PAR-CLIP	22100165
MIRT446631	hsa-miR-3689a-5p	PAR-CLIP	22100165
MIRT446630	hsa-miR-3689b-5p	PAR-CLIP	22100165
MIRT446629	hsa-miR-3689e	PAR-CLIP	22100165
MIRT446628	hsa-miR-3689f	PAR-CLIP	22100165
MIRT446627	hsa-miR-124-5p	PAR-CLIP	22100165
MIRT446638	hsa-miR-654-3p	PAR-CLIP	22100165
MIRT446637	hsa-miR-4677-3p	PAR-CLIP	22100165
MIRT446635	hsa-miR-4679	PAR-CLIP	22100165
MIRT446636	hsa-miR-190a-5p	PAR-CLIP	22100165
MIRT446634	hsa-miR-190b	PAR-CLIP	22100165
MIRT446633	hsa-miR-509-3p	PAR-CLIP	22100165
MIRT446632	hsa-miR-431-5p	PAR-CLIP	22100165
MIRT446631	hsa-miR-3689a-5p	PAR-CLIP	22100165
MIRT446630	hsa-miR-3689b-5p	PAR-CLIP	22100165
MIRT446629	hsa-miR-3689e	PAR-CLIP	22100165
MIRT446628	hsa-miR-3689f	PAR-CLIP	22100165
MIRT446627	hsa-miR-124-5p	PAR-CLIP	22100165
MIRT1331331	hsa-miR-1207-5p	CLIP-seq
MIRT1331332	hsa-miR-1225-5p	CLIP-seq
MIRT1331333	hsa-miR-1237	CLIP-seq
MIRT1331334	hsa-miR-1252	CLIP-seq
MIRT1331335	hsa-miR-129-3p	CLIP-seq
MIRT1331336	hsa-miR-1302	CLIP-seq
MIRT1331337	hsa-miR-1321	CLIP-seq
MIRT1331338	hsa-miR-1587	CLIP-seq
MIRT1331339	hsa-miR-185	CLIP-seq
MIRT1331340	hsa-miR-1915	CLIP-seq
MIRT1331341	hsa-miR-219-5p	CLIP-seq
MIRT1331342	hsa-miR-31	CLIP-seq
MIRT1331343	hsa-miR-3122	CLIP-seq
MIRT1331344	hsa-miR-3126-5p	CLIP-seq
MIRT1331345	hsa-miR-3136-3p	CLIP-seq
MIRT1331346	hsa-miR-3144-5p	CLIP-seq
MIRT1331347	hsa-miR-3150b-3p	CLIP-seq
MIRT1331348	hsa-miR-3173-3p	CLIP-seq
MIRT1331349	hsa-miR-3175	CLIP-seq
MIRT1331350	hsa-miR-3177-5p	CLIP-seq
MIRT1331351	hsa-miR-3199	CLIP-seq
MIRT1331352	hsa-miR-328	CLIP-seq
MIRT1331353	hsa-miR-3613-3p	CLIP-seq
MIRT1331354	hsa-miR-3646	CLIP-seq
MIRT1331355	hsa-miR-3647-3p	CLIP-seq
MIRT1331356	hsa-miR-3913-5p	CLIP-seq
MIRT1331357	hsa-miR-3944-5p	CLIP-seq
MIRT1331358	hsa-miR-4265	CLIP-seq
MIRT1331359	hsa-miR-4272	CLIP-seq
MIRT1331360	hsa-miR-4273	CLIP-seq
MIRT1331361	hsa-miR-4278	CLIP-seq
MIRT1331362	hsa-miR-4296	CLIP-seq
MIRT1331363	hsa-miR-4298	CLIP-seq
MIRT1331364	hsa-miR-4306	CLIP-seq
MIRT1331365	hsa-miR-4322	CLIP-seq
MIRT1331366	hsa-miR-4417	CLIP-seq
MIRT1331367	hsa-miR-4419a	CLIP-seq
MIRT1331368	hsa-miR-4445	CLIP-seq
MIRT1331369	hsa-miR-4459	CLIP-seq
MIRT1331370	hsa-miR-4492	CLIP-seq
MIRT1331371	hsa-miR-4498	CLIP-seq
MIRT1331372	hsa-miR-4510	CLIP-seq
MIRT1331373	hsa-miR-4515	CLIP-seq
MIRT1331374	hsa-miR-4644	CLIP-seq
MIRT1331375	hsa-miR-4656	CLIP-seq
MIRT1331376	hsa-miR-4666-5p	CLIP-seq
MIRT1331377	hsa-miR-4675	CLIP-seq
MIRT1331378	hsa-miR-4677-5p	CLIP-seq
MIRT1331379	hsa-miR-4716-3p	CLIP-seq
MIRT1331380	hsa-miR-4728-5p	CLIP-seq
MIRT1331381	hsa-miR-4736	CLIP-seq
MIRT1331382	hsa-miR-4739	CLIP-seq
MIRT1331383	hsa-miR-4741	CLIP-seq
MIRT1331384	hsa-miR-4742-5p	CLIP-seq
MIRT1331385	hsa-miR-4756-5p	CLIP-seq
MIRT1331386	hsa-miR-4757-3p	CLIP-seq
MIRT1331387	hsa-miR-4763-3p	CLIP-seq
MIRT1331388	hsa-miR-4765	CLIP-seq
MIRT1331389	hsa-miR-4779	CLIP-seq
MIRT1331390	hsa-miR-4782-3p	CLIP-seq
MIRT1331391	hsa-miR-4784	CLIP-seq
MIRT1331392	hsa-miR-495	CLIP-seq
MIRT1331393	hsa-miR-496	CLIP-seq
MIRT1331394	hsa-miR-508-3p	CLIP-seq
MIRT1331395	hsa-miR-5095	CLIP-seq
MIRT1331396	hsa-miR-513a-5p	CLIP-seq
MIRT1331397	hsa-miR-648	CLIP-seq
MIRT1331398	hsa-miR-7	CLIP-seq
MIRT1331399	hsa-miR-711	CLIP-seq
MIRT1331400	hsa-miR-762	CLIP-seq
MIRT1331401	hsa-miR-767-3p	CLIP-seq
MIRT1331402	hsa-miR-890	CLIP-seq
MIRT1331403	hsa-miR-891b	CLIP-seq
MIRT1553268	hsa-miR-1254	CLIP-seq
MIRT1553269	hsa-miR-1825	CLIP-seq
MIRT1553270	hsa-miR-3116	CLIP-seq
MIRT1553271	hsa-miR-3652	CLIP-seq
MIRT1553272	hsa-miR-4254	CLIP-seq
MIRT1553273	hsa-miR-4323	CLIP-seq
MIRT1553274	hsa-miR-4430	CLIP-seq
MIRT1553275	hsa-miR-4505	CLIP-seq
MIRT1553276	hsa-miR-4676-5p	CLIP-seq
MIRT1553277	hsa-miR-4786-3p	CLIP-seq
MIRT1553278	hsa-miR-515-3p	CLIP-seq
MIRT1553279	hsa-miR-519e	CLIP-seq
MIRT1553280	hsa-miR-550a	CLIP-seq
MIRT1553281	hsa-miR-575	CLIP-seq
MIRT1553282	hsa-miR-661	CLIP-seq
MIRT2097922	hsa-miR-1185	CLIP-seq
MIRT1331331	hsa-miR-1207-5p	CLIP-seq
MIRT2097923	hsa-miR-1208	CLIP-seq
MIRT2097924	hsa-miR-1224-3p	CLIP-seq
MIRT2097925	hsa-miR-1229	CLIP-seq
MIRT2097926	hsa-miR-1231	CLIP-seq
MIRT2097927	hsa-miR-1275	CLIP-seq
MIRT2097928	hsa-miR-1285	CLIP-seq
MIRT1331337	hsa-miR-1321	CLIP-seq
MIRT2097929	hsa-miR-149	CLIP-seq
MIRT1331338	hsa-miR-1587	CLIP-seq
MIRT1331339	hsa-miR-185	CLIP-seq
MIRT2097930	hsa-miR-187	CLIP-seq
MIRT2097931	hsa-miR-1909	CLIP-seq
MIRT1331341	hsa-miR-219-5p	CLIP-seq
MIRT2097932	hsa-miR-2278	CLIP-seq
MIRT2097933	hsa-miR-3064-5p	CLIP-seq
MIRT2097934	hsa-miR-3117-5p	CLIP-seq
MIRT1331344	hsa-miR-3126-5p	CLIP-seq
MIRT2097935	hsa-miR-3130-3p	CLIP-seq
MIRT2097936	hsa-miR-3136-5p	CLIP-seq
MIRT2097937	hsa-miR-3140-3p	CLIP-seq
MIRT1331346	hsa-miR-3144-5p	CLIP-seq
MIRT2097938	hsa-miR-3147	CLIP-seq
MIRT2097939	hsa-miR-3164	CLIP-seq
MIRT2097940	hsa-miR-3170	CLIP-seq
MIRT2097941	hsa-miR-3176	CLIP-seq
MIRT2097942	hsa-miR-3187-5p	CLIP-seq
MIRT2097943	hsa-miR-3189-3p	CLIP-seq
MIRT2097944	hsa-miR-3192	CLIP-seq
MIRT1331351	hsa-miR-3199	CLIP-seq
MIRT2097945	hsa-miR-3202	CLIP-seq
MIRT2097946	hsa-miR-3605-5p	CLIP-seq
MIRT2097947	hsa-miR-3612	CLIP-seq
MIRT2097948	hsa-miR-3622b-5p	CLIP-seq
MIRT2097949	hsa-miR-3650	CLIP-seq
MIRT1553271	hsa-miR-3652	CLIP-seq
MIRT2097950	hsa-miR-3660	CLIP-seq
MIRT2097951	hsa-miR-3663-3p	CLIP-seq
MIRT2097952	hsa-miR-3679-5p	CLIP-seq
MIRT2097953	hsa-miR-3686	CLIP-seq
MIRT2097954	hsa-miR-3689a-3p	CLIP-seq
MIRT2097955	hsa-miR-3689c	CLIP-seq
MIRT2097956	hsa-miR-3690	CLIP-seq
MIRT2097957	hsa-miR-3922-3p	CLIP-seq
MIRT1553272	hsa-miR-4254	CLIP-seq
MIRT2097958	hsa-miR-4264	CLIP-seq
MIRT1331358	hsa-miR-4265	CLIP-seq
MIRT2097959	hsa-miR-4266	CLIP-seq
MIRT2097960	hsa-miR-4271	CLIP-seq
MIRT1331360	hsa-miR-4273	CLIP-seq
MIRT2097961	hsa-miR-4276	CLIP-seq
MIRT1331361	hsa-miR-4278	CLIP-seq
MIRT2097962	hsa-miR-4293	CLIP-seq
MIRT1331362	hsa-miR-4296	CLIP-seq
MIRT1331364	hsa-miR-4306	CLIP-seq
MIRT2097963	hsa-miR-4318	CLIP-seq
MIRT1331365	hsa-miR-4322	CLIP-seq
MIRT1331366	hsa-miR-4417	CLIP-seq
MIRT1331367	hsa-miR-4419a	CLIP-seq
MIRT2097964	hsa-miR-4425	CLIP-seq
MIRT1553274	hsa-miR-4430	CLIP-seq
MIRT2097965	hsa-miR-4439	CLIP-seq
MIRT1331368	hsa-miR-4445	CLIP-seq
MIRT2097966	hsa-miR-4455	CLIP-seq
MIRT1331369	hsa-miR-4459	CLIP-seq
MIRT2097967	hsa-miR-4467	CLIP-seq
MIRT2097968	hsa-miR-4486	CLIP-seq
MIRT1331370	hsa-miR-4492	CLIP-seq
MIRT1331371	hsa-miR-4498	CLIP-seq
MIRT1553275	hsa-miR-4505	CLIP-seq
MIRT1331372	hsa-miR-4510	CLIP-seq
MIRT2097969	hsa-miR-4513	CLIP-seq
MIRT2097970	hsa-miR-4514	CLIP-seq
MIRT2097971	hsa-miR-451b	CLIP-seq
MIRT2097972	hsa-miR-4525	CLIP-seq
MIRT2097973	hsa-miR-4526	CLIP-seq
MIRT1331374	hsa-miR-4644	CLIP-seq
MIRT2097974	hsa-miR-4650-5p	CLIP-seq
MIRT1331375	hsa-miR-4656	CLIP-seq
MIRT2097975	hsa-miR-4665-5p	CLIP-seq
MIRT2097976	hsa-miR-4667-5p	CLIP-seq
MIRT1331377	hsa-miR-4675	CLIP-seq
MIRT1331378	hsa-miR-4677-5p	CLIP-seq
MIRT2097977	hsa-miR-4685-5p	CLIP-seq
MIRT2097978	hsa-miR-4692	CLIP-seq
MIRT2097979	hsa-miR-4695-3p	CLIP-seq
MIRT2097980	hsa-miR-4695-5p	CLIP-seq
MIRT2097981	hsa-miR-4700-5p	CLIP-seq
MIRT1331379	hsa-miR-4716-3p	CLIP-seq
MIRT2097982	hsa-miR-4723-5p	CLIP-seq
MIRT2097983	hsa-miR-4725-3p	CLIP-seq
MIRT1331380	hsa-miR-4728-5p	CLIP-seq
MIRT2097984	hsa-miR-4730	CLIP-seq
MIRT2097985	hsa-miR-4731-5p	CLIP-seq
MIRT1331382	hsa-miR-4739	CLIP-seq
MIRT2097986	hsa-miR-4740-5p	CLIP-seq
MIRT1331383	hsa-miR-4741	CLIP-seq
MIRT1331385	hsa-miR-4756-5p	CLIP-seq
MIRT1331386	hsa-miR-4757-3p	CLIP-seq
MIRT2097987	hsa-miR-4757-5p	CLIP-seq
MIRT1331387	hsa-miR-4763-3p	CLIP-seq
MIRT2097988	hsa-miR-4763-5p	CLIP-seq
MIRT2097989	hsa-miR-4777-5p	CLIP-seq
MIRT1331389	hsa-miR-4779	CLIP-seq
MIRT1331390	hsa-miR-4782-3p	CLIP-seq
MIRT2097990	hsa-miR-4794	CLIP-seq
MIRT2097991	hsa-miR-4797-3p	CLIP-seq
MIRT1331393	hsa-miR-496	CLIP-seq
MIRT1331394	hsa-miR-508-3p	CLIP-seq
MIRT1331395	hsa-miR-5095	CLIP-seq
MIRT2097992	hsa-miR-511	CLIP-seq
MIRT1331396	hsa-miR-513a-5p	CLIP-seq
MIRT2097993	hsa-miR-543	CLIP-seq
MIRT2097994	hsa-miR-578	CLIP-seq
MIRT2097995	hsa-miR-584	CLIP-seq
MIRT2097996	hsa-miR-612	CLIP-seq
MIRT2097997	hsa-miR-625	CLIP-seq
MIRT2097998	hsa-miR-635	CLIP-seq
MIRT2097999	hsa-miR-637	CLIP-seq
MIRT2098000	hsa-miR-650	CLIP-seq
MIRT1553282	hsa-miR-661	CLIP-seq
MIRT1331399	hsa-miR-711	CLIP-seq
MIRT1331400	hsa-miR-762	CLIP-seq
MIRT2098001	hsa-miR-767-5p	CLIP-seq
MIRT1331403	hsa-miR-891b	CLIP-seq
MIRT2098002	hsa-miR-892b	CLIP-seq
MIRT2098003	hsa-miR-940	CLIP-seq
MIRT2322568	hsa-miR-105	CLIP-seq
MIRT2322569	hsa-miR-1197	CLIP-seq
MIRT2097927	hsa-miR-1275	CLIP-seq
MIRT2097928	hsa-miR-1285	CLIP-seq
MIRT1331336	hsa-miR-1302	CLIP-seq
MIRT1331340	hsa-miR-1915	CLIP-seq
MIRT2322570	hsa-miR-2467-5p	CLIP-seq
MIRT2097933	hsa-miR-3064-5p	CLIP-seq
MIRT2097934	hsa-miR-3117-5p	CLIP-seq
MIRT1331346	hsa-miR-3144-5p	CLIP-seq
MIRT2322571	hsa-miR-3148	CLIP-seq
MIRT2097940	hsa-miR-3170	CLIP-seq
MIRT2097942	hsa-miR-3187-5p	CLIP-seq
MIRT2322572	hsa-miR-3188	CLIP-seq
MIRT1331351	hsa-miR-3199	CLIP-seq
MIRT2322573	hsa-miR-338-3p	CLIP-seq
MIRT2097947	hsa-miR-3612	CLIP-seq
MIRT2097948	hsa-miR-3622b-5p	CLIP-seq
MIRT2097949	hsa-miR-3650	CLIP-seq
MIRT1553271	hsa-miR-3652	CLIP-seq
MIRT2322574	hsa-miR-3664-3p	CLIP-seq
MIRT2322575	hsa-miR-3667-3p	CLIP-seq
MIRT2322576	hsa-miR-371-5p	CLIP-seq
MIRT2322577	hsa-miR-371b-5p	CLIP-seq
MIRT2322578	hsa-miR-378g	CLIP-seq
MIRT2322579	hsa-miR-3918	CLIP-seq
MIRT2322580	hsa-miR-3919	CLIP-seq
MIRT2322581	hsa-miR-3975	CLIP-seq
MIRT1331358	hsa-miR-4265	CLIP-seq
MIRT1331361	hsa-miR-4278	CLIP-seq
MIRT1331362	hsa-miR-4296	CLIP-seq
MIRT1331363	hsa-miR-4298	CLIP-seq
MIRT2322582	hsa-miR-4312	CLIP-seq
MIRT1331365	hsa-miR-4322	CLIP-seq
MIRT1331366	hsa-miR-4417	CLIP-seq
MIRT1553274	hsa-miR-4430	CLIP-seq
MIRT2322583	hsa-miR-4436b-3p	CLIP-seq
MIRT2322584	hsa-miR-4438	CLIP-seq
MIRT2097967	hsa-miR-4467	CLIP-seq
MIRT2097968	hsa-miR-4486	CLIP-seq
MIRT1331370	hsa-miR-4492	CLIP-seq
MIRT2322585	hsa-miR-4494	CLIP-seq
MIRT1331371	hsa-miR-4498	CLIP-seq
MIRT1553275	hsa-miR-4505	CLIP-seq
MIRT1331373	hsa-miR-4515	CLIP-seq
MIRT2322586	hsa-miR-4521	CLIP-seq
MIRT2097972	hsa-miR-4525	CLIP-seq
MIRT2322587	hsa-miR-4530	CLIP-seq
MIRT2322588	hsa-miR-4639-5p	CLIP-seq
MIRT2322589	hsa-miR-4645-5p	CLIP-seq
MIRT2322590	hsa-miR-4648	CLIP-seq
MIRT2322591	hsa-miR-4654	CLIP-seq
MIRT2097975	hsa-miR-4665-5p	CLIP-seq
MIRT2322592	hsa-miR-4673	CLIP-seq
MIRT2097977	hsa-miR-4685-5p	CLIP-seq
MIRT1331379	hsa-miR-4716-3p	CLIP-seq
MIRT2097982	hsa-miR-4723-5p	CLIP-seq
MIRT2322593	hsa-miR-4726-3p	CLIP-seq
MIRT2097984	hsa-miR-4730	CLIP-seq
MIRT2097985	hsa-miR-4731-5p	CLIP-seq
MIRT2097986	hsa-miR-4740-5p	CLIP-seq
MIRT1331386	hsa-miR-4757-3p	CLIP-seq
MIRT2322594	hsa-miR-4769-5p	CLIP-seq
MIRT2322595	hsa-miR-485-5p	CLIP-seq
MIRT1331393	hsa-miR-496	CLIP-seq
MIRT2322596	hsa-miR-499a-5p	CLIP-seq
MIRT2322597	hsa-miR-513a-3p	CLIP-seq
MIRT2322598	hsa-miR-516a-3p	CLIP-seq
MIRT2097996	hsa-miR-612	CLIP-seq
MIRT2097997	hsa-miR-625	CLIP-seq
MIRT2098000	hsa-miR-650	CLIP-seq
MIRT1331399	hsa-miR-711	CLIP-seq
MIRT1331400	hsa-miR-762	CLIP-seq
MIRT2322599	hsa-miR-766	CLIP-seq
MIRT2098001	hsa-miR-767-5p	CLIP-seq
MIRT2322600	hsa-miR-885-3p	CLIP-seq
MIRT1331403	hsa-miR-891b	CLIP-seq
MIRT2098002	hsa-miR-892b	CLIP-seq
MIRT1331338	hsa-miR-1587	CLIP-seq
MIRT1331341	hsa-miR-219-5p	CLIP-seq
MIRT2097933	hsa-miR-3064-5p	CLIP-seq
MIRT2097934	hsa-miR-3117-5p	CLIP-seq
MIRT1331346	hsa-miR-3144-5p	CLIP-seq
MIRT2097940	hsa-miR-3170	CLIP-seq
MIRT1331351	hsa-miR-3199	CLIP-seq
MIRT2097948	hsa-miR-3622b-5p	CLIP-seq
MIRT2097949	hsa-miR-3650	CLIP-seq
MIRT1553271	hsa-miR-3652	CLIP-seq
MIRT1331358	hsa-miR-4265	CLIP-seq
MIRT1331361	hsa-miR-4278	CLIP-seq
MIRT1331362	hsa-miR-4296	CLIP-seq
MIRT1331365	hsa-miR-4322	CLIP-seq
MIRT1331366	hsa-miR-4417	CLIP-seq
MIRT1553274	hsa-miR-4430	CLIP-seq
MIRT1331368	hsa-miR-4445	CLIP-seq
MIRT2097967	hsa-miR-4467	CLIP-seq
MIRT1331370	hsa-miR-4492	CLIP-seq
MIRT1331371	hsa-miR-4498	CLIP-seq
MIRT1553275	hsa-miR-4505	CLIP-seq
MIRT1331375	hsa-miR-4656	CLIP-seq
MIRT1331377	hsa-miR-4675	CLIP-seq
MIRT1331379	hsa-miR-4716-3p	CLIP-seq
MIRT2097982	hsa-miR-4723-5p	CLIP-seq
MIRT2097984	hsa-miR-4730	CLIP-seq
MIRT2097985	hsa-miR-4731-5p	CLIP-seq
MIRT2097986	hsa-miR-4740-5p	CLIP-seq
MIRT1331383	hsa-miR-4741	CLIP-seq
MIRT1331386	hsa-miR-4757-3p	CLIP-seq
MIRT1331390	hsa-miR-4782-3p	CLIP-seq
MIRT1331393	hsa-miR-496	CLIP-seq
MIRT1331394	hsa-miR-508-3p	CLIP-seq
MIRT1331399	hsa-miR-711	CLIP-seq
MIRT1331400	hsa-miR-762	CLIP-seq
MIRT2098001	hsa-miR-767-5p	CLIP-seq
MIRT1331403	hsa-miR-891b	CLIP-seq
MIRT2098002	hsa-miR-892b	CLIP-seq
MIRT2097933	hsa-miR-3064-5p	CLIP-seq
MIRT2097940	hsa-miR-3170	CLIP-seq
MIRT2097949	hsa-miR-3650	CLIP-seq
MIRT1553271	hsa-miR-3652	CLIP-seq
MIRT1331358	hsa-miR-4265	CLIP-seq
MIRT1331362	hsa-miR-4296	CLIP-seq
MIRT1331365	hsa-miR-4322	CLIP-seq
MIRT1331366	hsa-miR-4417	CLIP-seq
MIRT1553274	hsa-miR-4430	CLIP-seq
MIRT2097967	hsa-miR-4467	CLIP-seq
MIRT1553275	hsa-miR-4505	CLIP-seq
MIRT2097984	hsa-miR-4730	CLIP-seq
MIRT2097985	hsa-miR-4731-5p	CLIP-seq
MIRT2432943	hsa-miR-548aa	CLIP-seq
MIRT2098002	hsa-miR-892b	CLIP-seq
MIRT2440061	hsa-miR-326	CLIP-seq
MIRT2440062	hsa-miR-330-5p	CLIP-seq
MIRT2442593	hsa-miR-1228	CLIP-seq
MIRT2442594	hsa-miR-188-5p	CLIP-seq
MIRT2442595	hsa-miR-204	CLIP-seq
MIRT2442596	hsa-miR-211	CLIP-seq
MIRT2442597	hsa-miR-3127-5p	CLIP-seq
MIRT2442598	hsa-miR-3156-5p	CLIP-seq
MIRT2440061	hsa-miR-326	CLIP-seq
MIRT2440062	hsa-miR-330-5p	CLIP-seq
MIRT2442599	hsa-miR-4283	CLIP-seq
MIRT2442600	hsa-miR-4313	CLIP-seq
MIRT2442601	hsa-miR-4480	CLIP-seq
MIRT2442602	hsa-miR-4722-3p	CLIP-seq
MIRT2442603	hsa-miR-516b	CLIP-seq

Show/Hide all(14)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005515	Function	Protein binding	IPI	18093920
GO:0005796	Component	Golgi lumen	TAS
GO:0005886	Component	Plasma membrane	IEA
GO:0005886	Component	Plasma membrane	ISS
GO:0005886	Component	Plasma membrane	TAS
GO:0009986	Component	Cell surface	IBA
GO:0016020	Component	Membrane	IEA
GO:0016020	Component	Membrane	ISS
GO:0016477	Process	Cell migration	IBA
GO:0031012	Component	Extracellular matrix	HDA	27068509
GO:0042802	Function	Identical protein binding	IPI	18093920
GO:0043202	Component	Lysosomal lumen	TAS
GO:0044393	Component	Microspike	IEA
GO:0044393	Component	Microspike	ISS

MIM	HGNC	e!Ensembl
186357	10660	ENSG00000162512

Protein

UniProt ID

O75056

Protein name

Syndecan-3 (SYND3)

Protein function

Cell surface proteoglycan that may bear heparan sulfate (By similarity). May have a role in the organization of cell shape by affecting the actin cytoskeleton, possibly by transferring signals from the cell surface in a sugar-dependent mechanism

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF01034	Syndecan	378 → 440	Syndecan domain	Family

Tissue specificity

TISSUE SPECIFICITY: Expressed in the nervous system, the adrenal gland, and the spleen. {ECO:0000269|PubMed:11527150}.

Sequence

MKPGPPHRAGAAHGAGAGAGAAAGPGARGLLLPPLLLLLLAGRAAGAQRWRSENFERPVD
LEGSGDDDSFPDDELDDLYSGSGSGYFEQESGIETAMRFSPDVALAVSTTPAVLPTTNIQ
PVGTPFEELPSERPTLEPATSPLVVTEVPEEPSQRATTVSTTMATTAATSTGDPTVATVP
ATVATATPSTPAAPPFTATTAVIRTTGVRRLLPLPLTTVATARATTPEAPSPPTTAAVLD
TEAPTPRLVSTATSRPRALPRPATTQEPDIPERSTLPLGTTAPGPTEVAQTPTPETFLTT
IRDEPEVPVSGGPSGDFELPEEETTQPDTANEVVAVGGAAAKASSPPGTLPKGARPGPGL
LDNAIDSGSSAAQLPQKSILERKEVLVAVIVGGVVGALFAAFLVTLLIYRMKKKDEGSYT
LEEPKQASVTYQKPDKQEEFYA

Sequence length

442

Interactions

View interactions

	KEGG		Reactome
	Cell adhesion molecules Cytoskeleton in muscle cells		A tetrasaccharide linker sequence is required for GAG synthesis HS-GAG biosynthesis HS-GAG degradation Cell surface interactions at the vascular wall Syndecan interactions Defective B4GALT7 causes EDS, progeroid type Defective B3GAT3 causes JDSSDHD Defective EXT2 causes exostoses 2 Defective EXT1 causes exostoses 1, TRPS2 and CHDS Defective B3GALT6 causes EDSP2 and SEMDJL1 Retinoid metabolism and transport

Show/Hide Unknown Diseases (2)

Disease merge term	Disease name	Evidence	References	Source
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Obesity	Obesity, association with	N/A	N/A	ClinVar
Prostate cancer	Prostate cancer	N/A	N/A	GWAS

Show/Hide Text Mining Associations (26)

Disease Name	Relationship Type	References
Associations from Text Mining Disease associations identified through Pubtator
Alzheimer Disease	Stimulate	29361890, 30718543, 40724840
Arthritis	Associate	17545191
Arthritis Rheumatoid	Associate	16052590
Breast Neoplasms	Associate	23351331, 25617766, 33597614
Carcinoma Hepatocellular	Associate	28557334, 36189226
Carcinoma Renal Cell	Associate	29968393
Hypertension	Associate	36447229
Hypoxia	Stimulate	33117401
Hypoxia Brain	Stimulate	33117401
IgA Vasculitis	Associate	16052590
Inflammation	Associate	33117401, 40724840
Liver Failure	Associate	35726350
Neoplasm Metastasis	Stimulate	35628603
Neoplasms	Associate	24659893, 25617766, 29968393, 34445387
Neoplasms	Stimulate	33117401
Neurodegenerative Diseases	Associate	40724840
Neurofibromatosis Familial Spinal	Stimulate	37217626
Obesity	Associate	27515755
Ovarian Diseases	Associate	35628603
Ovarian Neoplasms	Associate	35628603
Pancreatic Neoplasms	Associate	24659893
Prostatic Neoplasms	Associate	34445387
Squamous Intraepithelial Lesions	Associate	37410084
Tarlov Cysts	Associate	24659893
Uterine Cervical Neoplasms	Associate	37410084
Uveal melanoma	Associate	36858025

SDC3 (syndecan 3)