Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
9512
Gene name Gene Name - the full gene name approved by the HGNC.
Peptidase, mitochondrial processing subunit beta
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
PMPCB
Synonyms (NCBI Gene) Gene synonyms aliases
Beta-MPP, MAS1, MPP11, MPPB, MPPP52, P-52
Chromosome Chromosome number
7
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
7q22.1
Summary Summary of gene provided in NCBI Entrez Gene.
This gene is a member of the peptidase M16 family and encodes a protein with a zinc-binding motif. This protein is located in the mitochondrial matrix and catalyzes the cleavage of the leader peptides of precursor proteins newly imported into the mitochon
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs145596167 C>T Pathogenic Non coding transcript variant, coding sequence variant, missense variant
rs146343535 G>C Pathogenic Non coding transcript variant, coding sequence variant, missense variant
rs200188353 G>A Pathogenic Missense variant, coding sequence variant, non coding transcript variant
rs1436866272 T>C,G Pathogenic Coding sequence variant, missense variant, non coding transcript variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT439943 hsa-miR-218-5p HITS-CLIP 23212916
MIRT439943 hsa-miR-218-5p HITS-CLIP 23212916
MIRT1244622 hsa-miR-1206 CLIP-seq
MIRT1244623 hsa-miR-1251 CLIP-seq
MIRT1244624 hsa-miR-1273g CLIP-seq
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0004222 Function Metalloendopeptidase activity IBA 21873635
GO:0004222 Function Metalloendopeptidase activity IDA 22354088
GO:0004222 Function Metalloendopeptidase activity TAS
GO:0005739 Component Mitochondrion IBA 21873635
GO:0005739 Component Mitochondrion IDA 22354088
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
603131 9119 ENSG00000105819
Protein
UniProt ID O75439
Protein name Mitochondrial-processing peptidase subunit beta (EC 3.4.24.64) (Beta-MPP) (P-52)
Protein function Catalytic subunit of the essential mitochondrial processing protease (MPP), which cleaves the mitochondrial sequence off newly imported precursors proteins (Probable) (PubMed:29576218). Preferentially, cleaves after an arginine at position P2 (B
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00675 Peptidase_M16 68 215 Insulinase (Peptidase family M16) Family
PF05193 Peptidase_M16_C 220 404 Peptidase M16 inactive domain Domain
Sequence
Sequence length 489
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Processing of SMDT1
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Developmental delay Global developmental delay rs28941770, rs199469464, rs281865469, rs143747297, rs398123009, rs587777428, rs786205133, rs606231459, rs797044854, rs797045027, rs864309504, rs878853160, rs886039902, rs886042046, rs886041291
View all (32 more)
Developmental regression Developmental regression rs1224421127
Leukoencephalopathy Leukoencephalopathy rs34757931
Mental retardation Intellectual Disability rs5742905, rs267607136, rs267607137, rs2131714307, rs267607038, rs267607042, rs80338685, rs137853127, rs80338815, rs28940893, rs387906309, rs121908096, rs121908099, rs587784365, rs121918315
View all (1024 more)
Associations from Text Mining
Disease Name Relationship Type References
Leigh Disease Associate 36675121