Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene SNPs miRNA Transcription factors Gene ontology Other IDs Protein Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	9496
Gene name Gene Name - the full gene name approved by the HGNC.	T-box transcription factor 4
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	TBX4
Synonyms (NCBI Gene) Gene synonyms aliases	ICPPS, PAPPAS, SPS
Chromosome Chromosome number	17
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	17q23.2
Summary Summary of gene provided in NCBI Entrez Gene.	This gene is a member of a phylogenetically conserved family of genes that share a common DNA-binding domain, the T-box. T-box genes encode transcription factors involved in the regulation of developmental processes. This gene is the human homolog of mous

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SNP ID	Visualize variation	Clinical significance	Consequence
rs28936696	A>G	Pathogenic	Genic downstream transcript variant, missense variant, coding sequence variant
rs28938474	G>T	Pathogenic	Missense variant, coding sequence variant
rs104894648	C>T	Pathogenic	Stop gained, coding sequence variant
rs754897911	C>-,CC	Likely-pathogenic, uncertain-significance	Coding sequence variant, genic downstream transcript variant, frameshift variant
rs886041115	T>G	Uncertain-significance, pathogenic	Missense variant, coding sequence variant
rs1397811125	G>A,T	Likely-pathogenic	Missense variant, stop gained, coding sequence variant
rs1555881112	G>A,T	Pathogenic	Splice donor variant
rs1555882009	C>G	Likely-pathogenic	Coding sequence variant, missense variant
rs1555882291	CCCTTTGGCC>-	Likely-pathogenic	Frameshift variant, coding sequence variant
rs1555883338	TTC>-	Likely-pathogenic	Inframe deletion, coding sequence variant
rs1555883342	G>A	Uncertain-significance, pathogenic	Splice donor variant
rs1555883466	C>T	Pathogenic	Stop gained, coding sequence variant
rs1569036773	->A	Pathogenic	Frameshift variant, coding sequence variant
rs1569044884	C>T	Pathogenic	Coding sequence variant, stop gained
rs1603248167	TTCCGGGCCC>-	Likely-pathogenic	Frameshift variant, coding sequence variant
rs1603248606	G>-	Pathogenic	Frameshift variant, coding sequence variant
rs1603251001	T>A	Pathogenic	Coding sequence variant, stop gained
rs1603251494	G>A	Pathogenic	Coding sequence variant, stop gained
rs1603254792	T>-	Pathogenic	Frameshift variant, coding sequence variant
rs1603255224	G>C	Pathogenic	Splice acceptor variant
rs1603255267	->C	Likely-pathogenic	Frameshift variant, coding sequence variant
rs1603255327	T>-	Likely-pathogenic	Frameshift variant, coding sequence variant
rs1603255336	->ATCA	Likely-pathogenic	Frameshift variant, coding sequence variant
rs1603255339	GA>TT	Likely-pathogenic	Coding sequence variant, stop gained
rs1603256040	C>T	Pathogenic	Coding sequence variant, stop gained, genic downstream transcript variant
rs1603256095	CCCCCAGA>-	Likely-pathogenic	Frameshift variant, coding sequence variant, genic downstream transcript variant

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miRTarBase ID	miRNA	Experiments	Reference
MIRT025176	hsa-miR-181a-5p	Microarray	17612493
MIRT607705	hsa-miR-8485	HITS-CLIP	23313552
MIRT607702	hsa-miR-603	HITS-CLIP	23313552
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23313552
MIRT607700	hsa-miR-6128	HITS-CLIP	23313552
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23313552
MIRT550395	hsa-miR-5011-5p	HITS-CLIP	23313552
MIRT550388	hsa-miR-6083	HITS-CLIP	23313552
MIRT550387	hsa-miR-1277-5p	HITS-CLIP	23313552
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT625561	hsa-miR-4724-3p	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607704	hsa-miR-329-3p	HITS-CLIP	23824327
MIRT607703	hsa-miR-362-3p	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607699	hsa-miR-3941	HITS-CLIP	23824327
MIRT670189	hsa-miR-4789-5p	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT625563	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625562	hsa-miR-3667-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT625561	hsa-miR-4724-3p	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT625560	hsa-miR-7152-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT625563	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625562	hsa-miR-3667-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT625561	hsa-miR-4724-3p	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT625560	hsa-miR-7152-5p	HITS-CLIP	23824327
MIRT625559	hsa-miR-578	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT625563	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625562	hsa-miR-3667-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT625561	hsa-miR-4724-3p	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT625560	hsa-miR-7152-5p	HITS-CLIP	23824327
MIRT625559	hsa-miR-578	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	24906430
MIRT607704	hsa-miR-329-3p	HITS-CLIP	24906430
MIRT607703	hsa-miR-362-3p	HITS-CLIP	24906430
MIRT607702	hsa-miR-603	HITS-CLIP	24906430
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	24906430
MIRT607700	hsa-miR-6128	HITS-CLIP	24906430
MIRT607699	hsa-miR-3941	HITS-CLIP	24906430
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	24906430
MIRT550395	hsa-miR-5011-5p	PAR-CLIP	20371350
MIRT550389	hsa-miR-190a-3p	PAR-CLIP	20371350
MIRT550388	hsa-miR-6083	PAR-CLIP	20371350
MIRT550387	hsa-miR-1277-5p	PAR-CLIP	20371350
MIRT550396	hsa-miR-648	PAR-CLIP	21572407
MIRT550395	hsa-miR-5011-5p	PAR-CLIP	21572407
MIRT550394	hsa-miR-3137	PAR-CLIP	21572407
MIRT550393	hsa-miR-20b-3p	PAR-CLIP	21572407
MIRT550392	hsa-miR-6073	PAR-CLIP	21572407
MIRT550391	hsa-miR-142-3p	PAR-CLIP	21572407
MIRT550390	hsa-miR-6867-5p	PAR-CLIP	21572407
MIRT550389	hsa-miR-190a-3p	PAR-CLIP	21572407
MIRT550388	hsa-miR-6083	PAR-CLIP	21572407
MIRT550387	hsa-miR-1277-5p	PAR-CLIP	21572407
MIRT550386	hsa-miR-4455	PAR-CLIP	21572407
MIRT550385	hsa-miR-574-5p	PAR-CLIP	21572407
MIRT607705	hsa-miR-8485	HITS-CLIP	23313552
MIRT607702	hsa-miR-603	HITS-CLIP	23313552
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23313552
MIRT607700	hsa-miR-6128	HITS-CLIP	23313552
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23313552
MIRT550395	hsa-miR-5011-5p	HITS-CLIP	23313552
MIRT550388	hsa-miR-6083	HITS-CLIP	23313552
MIRT550387	hsa-miR-1277-5p	HITS-CLIP	23313552
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT625561	hsa-miR-4724-3p	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607704	hsa-miR-329-3p	HITS-CLIP	23824327
MIRT607703	hsa-miR-362-3p	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607699	hsa-miR-3941	HITS-CLIP	23824327
MIRT670189	hsa-miR-4789-5p	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT625563	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625562	hsa-miR-3667-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT625561	hsa-miR-4724-3p	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT625560	hsa-miR-7152-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT625563	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625562	hsa-miR-3667-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT625561	hsa-miR-4724-3p	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT625560	hsa-miR-7152-5p	HITS-CLIP	23824327
MIRT625559	hsa-miR-578	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT625563	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625562	hsa-miR-3667-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT625561	hsa-miR-4724-3p	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT625560	hsa-miR-7152-5p	HITS-CLIP	23824327
MIRT625559	hsa-miR-578	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT607705	hsa-miR-8485	HITS-CLIP	23824327
MIRT607702	hsa-miR-603	HITS-CLIP	23824327
MIRT607701	hsa-miR-6757-3p	HITS-CLIP	23824327
MIRT607700	hsa-miR-6128	HITS-CLIP	23824327
MIRT607698	hsa-miR-6505-5p	HITS-CLIP	23824327
MIRT550395	hsa-miR-5011-5p	PAR-CLIP	20371350
MIRT550389	hsa-miR-190a-3p	PAR-CLIP	20371350
MIRT550388	hsa-miR-6083	PAR-CLIP	20371350
MIRT550387	hsa-miR-1277-5p	PAR-CLIP	20371350
MIRT550396	hsa-miR-648	PAR-CLIP	21572407
MIRT550395	hsa-miR-5011-5p	PAR-CLIP	21572407
MIRT550394	hsa-miR-3137	PAR-CLIP	21572407
MIRT550393	hsa-miR-20b-3p	PAR-CLIP	21572407
MIRT550392	hsa-miR-6073	PAR-CLIP	21572407
MIRT550391	hsa-miR-142-3p	PAR-CLIP	21572407
MIRT550390	hsa-miR-6867-5p	PAR-CLIP	21572407
MIRT550389	hsa-miR-190a-3p	PAR-CLIP	21572407
MIRT550388	hsa-miR-6083	PAR-CLIP	21572407
MIRT550387	hsa-miR-1277-5p	PAR-CLIP	21572407
MIRT550386	hsa-miR-4455	PAR-CLIP	21572407
MIRT550385	hsa-miR-574-5p	PAR-CLIP	21572407
MIRT1415285	hsa-miR-1224-3p	CLIP-seq
MIRT1415286	hsa-miR-125a-5p	CLIP-seq
MIRT1415287	hsa-miR-125b	CLIP-seq
MIRT1415288	hsa-miR-1272	CLIP-seq
MIRT1415289	hsa-miR-146a	CLIP-seq
MIRT1415290	hsa-miR-146b-5p	CLIP-seq
MIRT1415291	hsa-miR-185	CLIP-seq
MIRT1415292	hsa-miR-329	CLIP-seq
MIRT1415293	hsa-miR-3925-5p	CLIP-seq
MIRT1415294	hsa-miR-4286	CLIP-seq
MIRT1415295	hsa-miR-4306	CLIP-seq
MIRT1415296	hsa-miR-4319	CLIP-seq
MIRT1415297	hsa-miR-4427	CLIP-seq
MIRT1415298	hsa-miR-4644	CLIP-seq
MIRT1415299	hsa-miR-4680-3p	CLIP-seq
MIRT1415300	hsa-miR-4708-5p	CLIP-seq
MIRT1415301	hsa-miR-4756-3p	CLIP-seq
MIRT1415285	hsa-miR-1224-3p	CLIP-seq
MIRT2124629	hsa-miR-3925-3p	CLIP-seq
MIRT1415292	hsa-miR-329	CLIP-seq

Transcription factors

Show/Hide all(1)

Transcription factor	Regulation	Reference
PITX1	Unknown	20598276

Show/Hide all(26)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000785	Component	Chromatin	IBA
GO:0000785	Component	Chromatin	ISA
GO:0000978	Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA
GO:0000978	Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IEA
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	ISA
GO:0001525	Process	Angiogenesis	IBA
GO:0001525	Process	Angiogenesis	IEA
GO:0001708	Process	Cell fate specification	IBA
GO:0002009	Process	Morphogenesis of an epithelium	IEA
GO:0003677	Function	DNA binding	IEA
GO:0003677	Function	DNA binding	NAS	15106123
GO:0003700	Function	DNA-binding transcription factor activity	IEA
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IEA
GO:0006355	Process	Regulation of DNA-templated transcription	IEA
GO:0006357	Process	Regulation of transcription by RNA polymerase II	IBA
GO:0030324	Process	Lung development	IEA
GO:0030326	Process	Embryonic limb morphogenesis	IEA
GO:0030326	Process	Embryonic limb morphogenesis	IEA
GO:0035108	Process	Limb morphogenesis	IEA
GO:0035108	Process	Limb morphogenesis	IMP	15106123
GO:0035116	Process	Embryonic hindlimb morphogenesis	IMP	31761294
GO:0045893	Process	Positive regulation of DNA-templated transcription	IEA
GO:0048705	Process	Skeletal system morphogenesis	IMP	15106123
GO:1990401	Process	Embryonic lung development	IMP	31761294

MIM	HGNC	e!Ensembl
601719	11603	ENSG00000121075

Protein

UniProt ID

P57082

Protein name

T-box transcription factor TBX4 (T-box protein 4)

Protein function

Transcriptional regulator that has an essential role in the organogenesis of lungs, pelvis, and hindlimbs.

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF00907	T-box	69 → 251	T-box	Domain

Sequence

MLQDKGLSESEEAFRAPGPALGEASAANAPEPALAAPGLSGAALGSPPGPGADVVAAAAA
EQTIENIKVGLHEKELWKKFHEAGTEMIITKAGRRMFPSYKVKVTGMNPKTKYILLIDIV
PADDHRYKFCDNKWMVAGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDP
FGHIILNSMHKYQPRLHIVKADENNAFGSKNTAFCTHVFPETSFISVTSYQNHKITQLKI
ENNPFAKGFRGSDDSDLRVARLQSKEYPVISKSIMRQRLISPQLSATPDVGPLLGTHQAL
QHYQHENGAHSQLAEPQDLPLSTFPTQRDSSLFYHCLKRRDGTRHLDLPCKRSYLEAPSS
VGEDHYFRSPPPYDQQMLSPSYCSEVTPREACMYSGSGPEIAGVSGVDDLPPPPLSCNMW
TSVSPYTSYSVQTMETVPYQPFPTHFTATTMMPRLPTLSAQSSQPPGNAHFSVYNQLSQS
QVRERGPSASFPRERGLPQGCERKPPSPHLNAANEFLYSQTFSLSRESSLQYHSGMGTVE
NWTDG

Sequence length

545

Interactions

View interactions

Show/Hide Causal Diseases (4)

Disease merge term	Disease name	dbSNP ID	References
Causal Diseases caused by PATHOGENIC or LIKELY PATHOGENIC variants from ClinVar only
Coxopodopatellar Syndrome	coxopodopatellar syndrome	rs1603251001, rs754897911, rs1555881112, rs28938474, rs1569044884, rs104894648, rs1569036773, rs28936696, rs1603251494, rs1603248606, rs1603256040, rs1603255224, rs1555882291	N/A
Pulmonary arterial hypertension	pulmonary arterial hypertension	rs1603256095, rs1603248167, rs1397811125, rs1603255267, rs1603255327, rs1603255336, rs1603255339, rs754897911	N/A
Pulmonary Arterial Hypertension Associated With Congenital Heart Disease	pulmonary arterial hypertension associated with congenital heart disease	rs1555883338, rs754897911, rs1555883342, rs1555882009, rs1555882291	N/A
Pulmonary Hypertension	pulmonary hypertension, primary, 1	rs754897911, rs1603256095, rs1603248167, rs1555883342, rs1603248606, rs1603255327, rs1603255224	N/A

Show/Hide Unknown Diseases (2)

Disease merge term	Disease name	Evidence	References	Source
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Hypertension	Hypertension (confirmatory factor analysis Factor 12)	N/A	N/A	GWAS
Pulmonary Hypoplasia	primary pulmonary hypoplasia	N/A	N/A	ClinVar

Show/Hide Text Mining Associations (54)

Disease Name	Relationship Type	References
Associations from Text Mining Disease associations identified through Pubtator
Adenocarcinoma of Lung	Associate	32688456
Al Awadi syndrome	Associate	31761294
Alveolar capillary dysplasia	Associate	37821225, 40008593
Apraxias	Associate	29070031
Ataxia Telangiectasia	Associate	35852389
Blindness	Associate	31761294
Bowen syndrome	Associate	31965066
Breast Neoplasms	Associate	19454617
Bronchiolitis Obliterans	Associate	35075769
Carcinoma Acinar Cell	Associate	30828993
Carcinoma Adenoid Cystic	Associate	21692051
Carcinoma Non Small Cell Lung	Inhibit	30866410
Carcinoma Non Small Cell Lung	Associate	31311130
Carcinoma Pancreatic Ductal	Associate	21954337
Chromosome Deletion	Associate	37821225
Clubfoot	Associate	20598276, 22678995, 32518174, 36360195
Congenital Hemidysplasia with Ichthyosiform Erythroderma and Limb Defects	Associate	36085161
Delayed Cranial Ossification due to CBFB Haploinsufficiency	Stimulate	40008593
Developmental Dysplasia of the Hip	Associate	20887794, 36454308
Ectromelia	Associate	31761294, 31965066, 35075769
Familial Primary Pulmonary Hypertension	Associate	27453251, 27587546
Growth Disorders	Associate	31309540
Heart Diseases	Associate	31151956
Hip Dislocation	Associate	20887794
Hydrops Fetalis	Associate	31965066
Hypertension Pulmonary	Associate	30290780, 31151956, 31309540, 32079640
Hypoplastic Left Heart Syndrome	Associate	31965066
Iridogoniodysgenesis and skeletal anomalies	Associate	31151956
Ischiopatellar dysplasia	Associate	15106123, 23592887, 31761294, 32079640, 35075769, 35216193
Learning Disabilities	Associate	31151956
Lung agenesis	Associate	30639323, 35075769, 40008593
Lung Diseases	Associate	30413314, 30639323, 31151956, 31309540, 31965066, 35075769, 35852389, 37821225
Lung Diseases Interstitial	Associate	35075769, 35852389
Mental Disorders	Associate	29070031
Microcephaly	Associate	31309540
Multiple Sulfatase Deficiency Disease	Associate	36142358
Muscle Spasticity	Associate	31309540
Neoplasm Metastasis	Associate	25048347, 29542868
Neoplasms	Associate	21954337, 28971975, 29542868
Oculodentodigital Dysplasia	Associate	33967277
Optic Nerve Aplasia Bilateral	Associate	31965066
Pelvic Neoplasms	Associate	31761294, 31965066
Persistent Fetal Circulation Syndrome	Associate	31382961
Phenylketonurias	Associate	27587546
Pneumothorax	Associate	35075769
Pulmonary Arterial Hypertension	Associate	23592887, 27453251, 29631995, 30578383, 31727138, 32079640, 32348326, 34199176, 35075769, 35346192, 35852389, 36142358
Pulmonary Arterial Hypertension Hereditary Hemorrhagic Telangiectasia Related	Associate	27453251
Pulmonary Veno Occlusive Disease	Associate	33066286
Respiratory Insufficiency	Associate	30413314, 30828993
Sacral defect and anterior sacral meningocele	Associate	31965066
Sacrococcygeal dysgenesis association	Associate	31965066
Syndrome	Associate	35852389
Urethritis	Associate	26663319
Vascular Diseases	Associate	34199176

TBX4 (T-box transcription factor 4)