Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
949
Gene name Gene Name - the full gene name approved by the HGNC.
Scavenger receptor class B member 1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
SCARB1
Synonyms (NCBI Gene) Gene synonyms aliases
CD36L1, CLA-1, CLA1, HDLCQ6, HDLQTL6, SR-BI, SRB1
Chromosome Chromosome number
12
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
12q24.31
Summary Summary of gene provided in NCBI Entrez Gene.
The protein encoded by this gene is a plasma membrane receptor for high density lipoprotein cholesterol (HDL). The encoded protein mediates cholesterol transfer to and from HDL. In addition, this protein is a receptor for hepatitis C virus glycoprotein E2
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs74830677 G>A Pathogenic Missense variant, intron variant, non coding transcript variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT035549 hsa-miR-185-5p Luciferase reporter assay 23459944
MIRT035549 hsa-miR-185-5p Luciferase reporter assay 23459944
MIRT035549 hsa-miR-185-5p Luciferase reporter assay 23459944
MIRT035550 hsa-miR-96-5p Luciferase reporter assay 23459944
MIRT035551 hsa-miR-223-3p Luciferase reporter assay 23459944
Transcription factors
Transcription factor Regulation Reference
NR1H4 Activation 20956002
SPI1 Unknown 8007948
STAT1 Unknown 17998316
STAT2 Unknown 17998316
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0001530 Function Lipopolysaccharide binding IDA 12651854
GO:0001540 Function Amyloid-beta binding IEA
GO:0001618 Function Virus receptor activity IEA
GO:0001786 Function Phosphatidylserine binding ISS
GO:0001875 Function Lipopolysaccharide immune receptor activity IDA 12651854
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
601040 1664 ENSG00000073060
Protein
UniProt ID Q8WTV0
Protein name Scavenger receptor class B member 1 (SRB1) (CD36 and LIMPII analogous 1) (CLA-1) (CD36 antigen-like 1) (Collagen type I receptor, thrombospondin receptor-like 1) (SR-BI) (CD antigen CD36)
Protein function Receptor for different ligands such as phospholipids, cholesterol ester, lipoproteins, phosphatidylserine and apoptotic cells (PubMed:12016218, PubMed:12519372, PubMed:21226579). Receptor for HDL, mediating selective uptake of cholesteryl ether
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01130 CD36 16 463 CD36 family Family
Tissue specificity TISSUE SPECIFICITY: Widely expressed.
Sequence
Sequence length 552
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Virion - Hepatitis viruses
Phagosome
Ovarian steroidogenesis
Aldosterone synthesis and secretion
Cortisol synthesis and secretion
Cushing syndrome
Fat digestion and absorption
Bile secretion
Vitamin digestion and absorption
Cholesterol metabolism
Hepatitis C
  Scavenging by Class B Receptors
HDL clearance
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Alzheimer disease Alzheimer`s Disease rs63750215, rs28936379, rs63749851, rs63749884, rs28936380, rs63750048, rs63750579, rs63750264, rs63749964, rs63750671, rs281865161, rs63750066, rs63750399, rs63750734, rs63751039
View all (65 more)
30805717
Carcinoma Carcinoma, Carcinoma, Spindle-Cell, Undifferentiated carcinoma rs121912654, rs555607708, rs786202962, rs1564055259 12376462
Coronary artery disease Coronary Artery Disease rs137852988, rs121918313, rs121918529, rs121918531, rs137852340, rs1555800701, rs1215189537 28714975, 23202125, 29212778
Hypercholesterolemia Hypercholesterolemia rs28942111, rs28942112, rs137852912, rs121908025, rs28942082, rs28942083, rs121908028, rs121908030, rs28942079, rs28942084, rs121908032, rs387906302, rs387906303, rs121908033, rs121908034
View all (1161 more)
Unknown
Disease term Disease name Evidence References Source
Chromophobe carcinoma Chromophobe Renal Cell Carcinoma 21131975 ClinVar
Coronary heart disease Coronary heart disease 28753643 ClinVar
Coronary syndrome Acute Coronary Syndrome 28753643 ClinVar
Renal Carcinoma Renal Carcinoma GWAS
Associations from Text Mining
Disease Name Relationship Type References
Achalasia Addisonianism Alacrimia syndrome Associate 37331934
Adenocarcinoma of Lung Associate 29595658
Adrenal Insufficiency Associate 37331934
Adrenocortical Carcinoma Associate 10426565
Alagille Syndrome Associate 15210845
Arthritis Associate 22076945
Arthritis Rheumatoid Associate 20304957
Ataxia Telangiectasia Associate 24405662
Atherosclerosis Associate 12238639, 16122381, 17587765, 20057170, 20160195, 22628436, 24713582, 27225585, 27651445, 27777974, 30289950, 31858876
Atherosclerosis Inhibit 17957039