Gene Gene information from NCBI Gene database.
Entrez ID 9440
Gene name Mediator complex subunit 17
Gene symbol MED17
Synonyms (NCBI Gene)
CRSP6CRSP77DRIP80SRB4TRAP80
Chromosome 11
Chromosome location 11q21
Summary The activation of gene transcription is a multistep process that is triggered by factors that recognize transcriptional enhancer sites in DNA. These factors work with co-activators to direct transcriptional initiation by the RNA polymerase II apparatus. T
SNPs SNP information provided by dbSNP.
5
SNP ID Visualize variation Clinical significance Consequence
rs35313315 T>A Conflicting-interpretations-of-pathogenicity Coding sequence variant, missense variant
rs267607232 T>C Pathogenic Coding sequence variant, missense variant
rs587780394 C>T Likely-pathogenic Coding sequence variant, missense variant
rs752341132 C>T Pathogenic Stop gained, coding sequence variant
rs1356392449 G>A Likely-pathogenic Missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
277
miRTarBase ID miRNA Experiments Reference
MIRT045353 hsa-miR-185-5p CLASH 23622248
MIRT672491 hsa-miR-500a-5p HITS-CLIP 23824327
MIRT670986 hsa-miR-3929 HITS-CLIP 23824327
MIRT670985 hsa-miR-4419b HITS-CLIP 23824327
MIRT670984 hsa-miR-4478 HITS-CLIP 23824327
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
33
GO ID Ontology Definition Evidence Reference
GO:0000151 Component Ubiquitin ligase complex IEA
GO:0003712 Function Transcription coregulator activity IBA
GO:0003712 Function Transcription coregulator activity IDA 10198638
GO:0003712 Function Transcription coregulator activity IEA
GO:0003713 Function Transcription coactivator activity IDA 12037571, 12218053
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
603810 2375 ENSG00000042429
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q9NVC6
Protein name Mediator of RNA polymerase II transcription subunit 17 (Activator-recruited cofactor 77 kDa component) (ARC77) (Cofactor required for Sp1 transcriptional activation subunit 6) (CRSP complex subunit 6) (Mediator complex subunit 17) (Thyroid hormone recepto
Protein function Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RN
PDB 7EMF , 7ENA , 7ENC , 7ENJ , 7LBM , 7NVR , 8GXQ , 8GXS , 8T9D , 8TQW , 8TRH
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF10156 Med17 125 453 Subunit 17 of Mediator complex Family
Tissue specificity TISSUE SPECIFICITY: Ubiquitous. {ECO:0000269|PubMed:10198638}.
Sequence
MSGVRAVRISIESACEKQVHEVGLDGTETYLPPLSMSQNLARLAQRIDFSQGSGSEEEEA
AGTEGDAQEWPGAGSSADQDDEEGVVKFQPSLWPWDSVRNNLRSALTEMCVLYDVLSIVR
DKKFMTLDPVSQDALPPKQNPQTLQLISKKKSLAGAAQILLKGAERLTKSVTENQENKLQ
RDFNSELLRLRQHWKLRKVGDKILGDLSYRSAGSLFPHHGTFEVIKNTDLDLDKKIPEDY
CPLDVQIPSDLEGSAYIKVSIQKQAPDIGDLGTVNLFKRPLPKSKPGSPHWQTKLEAAQN
VLLCKEIFAQLSREAVQIKSQVPHIVVKNQIISQPFPSLQLSISLCHSSNDKKSQKFATE
KQCPEDHLYVLEHNLHLLIREFHKQTLSSIMMPHPASAPFGHKRMRLSGPQAFDKNEINS
LQSSEGLLEKIIKQAKHIFLRSRAAATIDSLAS
RIEDPQIQAHWSNINDVYESSVKVLIT
SQGYEQICKSIQLQLNIGVEQIRVVHRDGRVITLSYQEQELQDFLLSQMSQHQVHAVQQL
AKVMGWQVLSFSNHVGLGPIESIGNASAITVASPSGDYAISVRNGPESGSKIMVQFPRNQ
CKDLPKSDVLQDNKWSHLRGPFKEVQWNKMEGRNFVYKMELLMSALSPCLL
Sequence length 651
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Thyroid hormone signaling pathway   PPARA activates gene expression
Generic Transcription Pathway
Transcriptional regulation of white adipocyte differentiation
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
121
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Infantile cerebral and cerebellar atrophy with postnatal progressive microcephaly Likely pathogenic; Pathogenic rs1302840036, rs372097081, rs776884086, rs2135707267, rs767023414, rs1299335718, rs749631821, rs2497522528, rs267607232, rs763249105, rs372622191, rs1943967240, rs746738191 RCV005005915
RCV001780302
RCV002499795
RCV005008302
RCV005008361
RCV005011216
RCV005008764
RCV003230785
RCV000006410
RCV002291292
RCV005005010
RCV001199278
RCV005012616
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Acute myeloid leukemia Benign rs7108692 RCV005925167
Cervical cancer Benign rs7108692 RCV005925168
Intellectual disability Uncertain significance; Conflicting classifications of pathogenicity rs756882876, rs761959231 RCV001252068
RCV001257653
Lung cancer Benign rs7108692 RCV005925171
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Breast Neoplasms Associate 33017027
Carcinoma Hepatocellular Associate 35069777
COVID 19 Associate 35390032
Ectrodactyly cardiopathy dysmorphism Associate 40113094