Gene Gene information from NCBI Gene database.
Entrez ID 94
Gene name Activin A receptor like type 1
Gene symbol ACVRL1
Synonyms (NCBI Gene)
ACVRLK1ALK-1ALK1HHTHHT2ORW2SKR3TSR-I
Chromosome 12
Chromosome location 12q13.13
Summary This gene encodes a type I cell-surface receptor for the TGF-beta superfamily of ligands. It shares with other type I receptors a high degree of similarity in serine-threonine kinase subdomains, a glycine- and serine-rich region (called the GS domain) pre
SNPs SNP information provided by dbSNP.
159
SNP ID Visualize variation Clinical significance Consequence
rs28936399 T>G Pathogenic Missense variant, coding sequence variant
rs28936401 C>A,T Pathogenic, uncertain-significance Missense variant, synonymous variant, coding sequence variant
rs28936687 G>A Pathogenic Missense variant, 5 prime UTR variant, coding sequence variant
rs28936688 G>A,T Likely-pathogenic, pathogenic Missense variant, coding sequence variant
rs76038779 C>T Conflicting-interpretations-of-pathogenicity Missense variant, intron variant, 5 prime UTR variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
277
miRTarBase ID miRNA Experiments Reference
MIRT715923 hsa-miR-3127-3p HITS-CLIP 19536157
MIRT715922 hsa-miR-6756-3p HITS-CLIP 19536157
MIRT715921 hsa-miR-5088-3p HITS-CLIP 19536157
MIRT715920 hsa-miR-7110-3p HITS-CLIP 19536157
MIRT715919 hsa-miR-6817-3p HITS-CLIP 19536157
Transcription factors Transcription factors information provided by TRRUST V2 database.
2
Transcription factor Regulation Reference
SP1 Unknown 20587022
TCF7L2 Unknown 20803090
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
121
GO ID Ontology Definition Evidence Reference
GO:0000166 Function Nucleotide binding IEA
GO:0001525 Process Angiogenesis IBA
GO:0001525 Process Angiogenesis IEA
GO:0001525 Process Angiogenesis IEA
GO:0001525 Process Angiogenesis IMP 16752392, 32082362
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
601284 175 ENSG00000139567
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P37023
Protein name Activin receptor type-1-like (EC 2.7.11.30) (Activin receptor-like kinase 1) (ALK-1) (Serine/threonine-protein kinase receptor R3) (SKR3) (TGF-B superfamily receptor type I) (TSR-I)
Protein function Type I receptor for TGF-beta family ligands BMP9/GDF2 and BMP10 and important regulator of normal blood vessel development. On ligand binding, forms a receptor complex consisting of two type II and two type I transmembrane serine/threonine kinas
PDB 2LCR , 3MY0 , 4FAO , 6SF1 , 6SF2 , 6SF3 , 7PPC
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF08515 TGF_beta_GS 173 200 Transforming growth factor beta type I GS-motif Family
PF07714 PK_Tyr_Ser-Thr 202 489 Protein tyrosine and serine/threonine kinase Domain
Sequence
Sequence length 503
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Cytokine-cytokine receptor interaction   Signaling by BMP
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
1489
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
ACVRL1-related disorder Pathogenic; Likely pathogenic rs2139075900, rs2139084385, rs1555152548, rs863223415, rs863223416, rs28936401, rs2540174684, rs779485996, rs1060503234, rs1060503242, rs1085307405, rs1555153126, rs1555152774, rs1555153828, rs750085854 RCV004550099
RCV004729039
RCV004741168
RCV003235117
RCV004553062
RCV004547469
RCV004550617
RCV004722791
RCV004551532
RCV004722792
RCV004551616
RCV004740289
RCV004722892
RCV004547800
RCV004548064
Cardiovascular phenotype Pathogenic; Likely pathogenic rs2139064475, rs2139067412, rs1555152710, rs1057256890, rs2139074041, rs2139084154, rs2139067969, rs2139074368, rs2139065261, rs2139068677, rs2139084385, rs2139064592, rs1085307418, rs2139070482, rs2139077046
View all (166 more)
RCV002456602
RCV002322366
RCV005540433
RCV002377578
RCV002322371
RCV002384546
RCV002343698
RCV002405206
RCV002422861
RCV002343877
RCV002386900
RCV002386613
RCV002334821
RCV003170168
RCV002361341
RCV002423133
RCV002343930
RCV002386637
RCV002407179
RCV002389032
RCV002407052
RCV002343919
RCV002388756
RCV002390302
RCV002459406
RCV002328192
RCV002320845
RCV002452284
RCV002375709
RCV002332185
RCV002326079
RCV002320586
RCV002320589
RCV002445736
RCV002349378
RCV002347760
RCV002366593
RCV002353896
RCV002364125
RCV002361789
RCV002335554
RCV002341032
RCV002361545
RCV002361673
RCV002375830
RCV002378063
RCV002382581
RCV002416830
RCV002434870
RCV002450075
RCV002371435
RCV002371436
RCV002378392
RCV002370716
RCV002373349
RCV002378646
RCV002378916
RCV002376523
RCV002386985
RCV002367369
RCV002380509
RCV002384885
RCV002447904
RCV002376384
RCV002378463
RCV002374322
RCV002378278
RCV002396479
RCV002376697
RCV002398404
RCV002387392
RCV002387406
RCV002382900
RCV002385872
RCV002385910
RCV002391704
RCV002389143
RCV002394711
RCV002403328
RCV002380826
RCV002383567
RCV002398675
RCV002401810
RCV002417909
RCV002428552
RCV002408231
RCV002424385
RCV002431169
RCV002424209
RCV002428464
RCV002437773
RCV002435847
RCV002442329
RCV003164724
RCV005794470
RCV002390511
RCV002399717
RCV002415829
RCV002426928
RCV002321780
RCV002327029
RCV002381660
RCV002381661
RCV002433872
RCV002381659
RCV002388766
RCV002390510
RCV002371767
RCV002444423
RCV002390097
RCV002433448
RCV002390098
RCV002362571
RCV002390099
RCV002381244
RCV002345234
RCV002372240
RCV002408944
RCV003310441
RCV003341998
RCV004369276
RCV004992654
RCV002392938
RCV002392977
RCV002365499
RCV002411508
RCV004022871
RCV003168848
RCV004992242
RCV002374809
RCV002402291
RCV002436455
RCV002383932
RCV002420248
RCV002438191
RCV002431425
RCV002413346
RCV002413347
RCV002404279
RCV002395184
RCV002395185
RCV002395186
RCV002446962
RCV002367695
RCV002376938
RCV002341193
RCV002455978
RCV002438237
RCV003159651
RCV002377081
RCV002413524
RCV002350270
RCV002395381
RCV002448693
RCV002395380
RCV002395541
RCV002358746
RCV003303025
RCV002343486
RCV002388343
RCV002388242
RCV002388215
RCV002397491
RCV002369971
RCV002386230
RCV002334295
RCV002360842
RCV002370003
RCV002424882
RCV002424898
RCV002363104
RCV003307520
RCV002370110
RCV002381822
RCV002381809
RCV002381824
RCV002320216
RCV002320218
RCV006347334
RCV002374913
RCV002348459
RCV002339285
RCV002339315
RCV002372753
RCV002374963
RCV005306260
RCV002400218
RCV002379838
RCV002418696
RCV002429898
RCV002375157
RCV002365953
RCV002379903
RCV002393672
Clear cell carcinoma of kidney Likely pathogenic rs763785885 RCV005928396
Epistaxis Pathogenic rs863223408 RCV000414952
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Abnormal bleeding Likely benign; Uncertain significance rs139142865, rs779287554 RCV001270508
RCV001270531
Cholangiocarcinoma Benign rs2656315 RCV005905489
Gastric cancer Benign rs77341011 RCV005892407
Haemorrhagic telangiectasia 2 Likely benign; Conflicting classifications of pathogenicity rs149664056, rs139380315, rs141764916, rs139142865 RCV000148355
RCV000148357
RCV000148356
RCV000148353
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Adenocarcinoma of Lung Associate 34036102
Anemia Associate 32503579, 40205542
Angiodysplasia Associate 22553411
Arterial Occlusive Diseases Associate 11484689
Arterio Arterial Fistula Associate 24724759
Arteriovenous Malformations Associate 12843319, 16155196, 17220751, 18673552, 19270816, 19508727, 21967607, 25847705, 29048420, 32503579, 32962750, 34872578
Arteriovenous Malformations Stimulate 26041630, 37695357
Arteriovenous Malformations Inhibit 36198763
Basal Ganglia Hemorrhage Associate 22553411
Brain Abscess Associate 30251589