NRXN3 (neurexin 3)

Gene

• Entrez ID: 9369
• Gene name: Neurexin 3
• Gene symbol: NRXN3
• Synonyms (NCBI Gene): C14orf60
• Chromosome: 14
• Chromosome location: 14q24.3-q31.1
• Summary: This gene encodes a member of a family of proteins that function in the nervous system as receptors and cell adhesion molecules. Extensive alternative splicing and the use of alternative promoters results in multiple transcript variants and protein isofor

SNPs

SNP ID	Visualize variation	Clinical significance	Consequence
rs531047390	A>G	Pathogenic	Genic upstream transcript variant, intron variant
rs768341004	G>A,C	Likely-pathogenic	Downstream transcript variant, genic downstream transcript variant, non coding transcript variant, missense variant, coding sequence variant

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT016059	hsa-miR-374b-5p	Sequencing	20371350
MIRT049473	hsa-miR-92a-3p	CLASH	23622248
MIRT682431	hsa-miR-1910-3p	HITS-CLIP	23706177
MIRT682430	hsa-miR-6511a-5p	HITS-CLIP	23706177
MIRT682429	hsa-miR-4257	HITS-CLIP	23706177
MIRT655724	hsa-miR-1827	HITS-CLIP	23706177
MIRT667149	hsa-miR-377-5p	HITS-CLIP	23706177
MIRT667148	hsa-miR-6086	HITS-CLIP	23706177
MIRT682428	hsa-miR-2467-3p	HITS-CLIP	23706177
MIRT682427	hsa-miR-6499-3p	HITS-CLIP	23706177
MIRT682426	hsa-miR-6807-5p	HITS-CLIP	23706177
MIRT682425	hsa-miR-455-3p	HITS-CLIP	23706177
MIRT682424	hsa-miR-6516-5p	HITS-CLIP	23706177
MIRT655740	hsa-miR-512-5p	HITS-CLIP	23824327
MIRT655739	hsa-miR-510-5p	HITS-CLIP	23824327
MIRT655738	hsa-miR-4695-5p	HITS-CLIP	23824327
MIRT655737	hsa-miR-6808-5p	HITS-CLIP	23824327
MIRT655736	hsa-miR-6893-5p	HITS-CLIP	23824327
MIRT655735	hsa-miR-940	HITS-CLIP	23824327
MIRT655733	hsa-miR-3929	HITS-CLIP	23824327
MIRT655734	hsa-miR-4419b	HITS-CLIP	23824327
MIRT655732	hsa-miR-4478	HITS-CLIP	23824327
MIRT667151	hsa-miR-5690	HITS-CLIP	23824327
MIRT655731	hsa-miR-4768-3p	HITS-CLIP	23824327
MIRT655730	hsa-miR-4459	HITS-CLIP	23824327
MIRT655729	hsa-miR-4433a-3p	HITS-CLIP	23824327
MIRT655728	hsa-miR-5707	HITS-CLIP	23824327
MIRT655727	hsa-miR-1282	HITS-CLIP	23824327
MIRT655726	hsa-miR-3664-3p	HITS-CLIP	23824327
MIRT655725	hsa-miR-4649-3p	HITS-CLIP	23824327
MIRT655724	hsa-miR-1827	HITS-CLIP	23824327
MIRT655723	hsa-miR-485-5p	HITS-CLIP	23824327
MIRT655722	hsa-miR-6884-5p	HITS-CLIP	23824327
MIRT667150	hsa-miR-655-5p	HITS-CLIP	23824327
MIRT667149	hsa-miR-377-5p	HITS-CLIP	23824327
MIRT667148	hsa-miR-6086	HITS-CLIP	23824327
MIRT655721	hsa-miR-4722-5p	HITS-CLIP	23824327
MIRT655720	hsa-miR-7160-5p	HITS-CLIP	23824327
MIRT655719	hsa-miR-1304-5p	HITS-CLIP	23824327
MIRT655718	hsa-miR-665	HITS-CLIP	23824327
MIRT655740	hsa-miR-512-5p	HITS-CLIP	23824327
MIRT655739	hsa-miR-510-5p	HITS-CLIP	23824327
MIRT655738	hsa-miR-4695-5p	HITS-CLIP	23824327
MIRT655737	hsa-miR-6808-5p	HITS-CLIP	23824327
MIRT655736	hsa-miR-6893-5p	HITS-CLIP	23824327
MIRT655735	hsa-miR-940	HITS-CLIP	23824327
MIRT655733	hsa-miR-3929	HITS-CLIP	23824327
MIRT655734	hsa-miR-4419b	HITS-CLIP	23824327
MIRT655732	hsa-miR-4478	HITS-CLIP	23824327
MIRT667151	hsa-miR-5690	HITS-CLIP	23824327
MIRT655731	hsa-miR-4768-3p	HITS-CLIP	23824327
MIRT655730	hsa-miR-4459	HITS-CLIP	23824327
MIRT655729	hsa-miR-4433a-3p	HITS-CLIP	23824327
MIRT655728	hsa-miR-5707	HITS-CLIP	23824327
MIRT655727	hsa-miR-1282	HITS-CLIP	23824327
MIRT655726	hsa-miR-3664-3p	HITS-CLIP	23824327
MIRT655725	hsa-miR-4649-3p	HITS-CLIP	23824327
MIRT655724	hsa-miR-1827	HITS-CLIP	23824327
MIRT655723	hsa-miR-485-5p	HITS-CLIP	23824327
MIRT655722	hsa-miR-6884-5p	HITS-CLIP	23824327
MIRT667150	hsa-miR-655-5p	HITS-CLIP	23824327
MIRT667149	hsa-miR-377-5p	HITS-CLIP	23824327
MIRT667148	hsa-miR-6086	HITS-CLIP	23824327
MIRT655721	hsa-miR-4722-5p	HITS-CLIP	23824327
MIRT655720	hsa-miR-7160-5p	HITS-CLIP	23824327
MIRT655719	hsa-miR-1304-5p	HITS-CLIP	23824327
MIRT655718	hsa-miR-665	HITS-CLIP	23824327
MIRT667162	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT667161	hsa-miR-3940-3p	HITS-CLIP	23824327
MIRT667160	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT640038	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT667159	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT667158	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT667157	hsa-miR-4252	HITS-CLIP	23824327
MIRT667156	hsa-miR-1273a	HITS-CLIP	23824327
MIRT667155	hsa-miR-1227-3p	HITS-CLIP	23824327
MIRT667154	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT667153	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT667152	hsa-miR-7703	HITS-CLIP	23824327
MIRT655740	hsa-miR-512-5p	HITS-CLIP	23824327
MIRT655739	hsa-miR-510-5p	HITS-CLIP	23824327
MIRT655738	hsa-miR-4695-5p	HITS-CLIP	23824327
MIRT655737	hsa-miR-6808-5p	HITS-CLIP	23824327
MIRT655736	hsa-miR-6893-5p	HITS-CLIP	23824327
MIRT655735	hsa-miR-940	HITS-CLIP	23824327
MIRT655733	hsa-miR-3929	HITS-CLIP	23824327
MIRT655734	hsa-miR-4419b	HITS-CLIP	23824327
MIRT655732	hsa-miR-4478	HITS-CLIP	23824327
MIRT667151	hsa-miR-5690	HITS-CLIP	23824327
MIRT655731	hsa-miR-4768-3p	HITS-CLIP	23824327
MIRT655730	hsa-miR-4459	HITS-CLIP	23824327
MIRT655729	hsa-miR-4433a-3p	HITS-CLIP	23824327
MIRT655728	hsa-miR-5707	HITS-CLIP	23824327
MIRT655727	hsa-miR-1282	HITS-CLIP	23824327
MIRT655726	hsa-miR-3664-3p	HITS-CLIP	23824327
MIRT655725	hsa-miR-4649-3p	HITS-CLIP	23824327
MIRT655724	hsa-miR-1827	HITS-CLIP	23824327
MIRT655723	hsa-miR-485-5p	HITS-CLIP	23824327
MIRT655722	hsa-miR-6884-5p	HITS-CLIP	23824327
MIRT667150	hsa-miR-655-5p	HITS-CLIP	23824327
MIRT667149	hsa-miR-377-5p	HITS-CLIP	23824327
MIRT667148	hsa-miR-6086	HITS-CLIP	23824327
MIRT655721	hsa-miR-4722-5p	HITS-CLIP	23824327
MIRT655720	hsa-miR-7160-5p	HITS-CLIP	23824327
MIRT655719	hsa-miR-1304-5p	HITS-CLIP	23824327
MIRT655718	hsa-miR-665	HITS-CLIP	23824327
MIRT655740	hsa-miR-512-5p	HITS-CLIP	23824327
MIRT655739	hsa-miR-510-5p	HITS-CLIP	23824327
MIRT655738	hsa-miR-4695-5p	HITS-CLIP	23824327
MIRT655737	hsa-miR-6808-5p	HITS-CLIP	23824327
MIRT655736	hsa-miR-6893-5p	HITS-CLIP	23824327
MIRT655735	hsa-miR-940	HITS-CLIP	23824327
MIRT655733	hsa-miR-3929	HITS-CLIP	23824327
MIRT655734	hsa-miR-4419b	HITS-CLIP	23824327
MIRT655732	hsa-miR-4478	HITS-CLIP	23824327
MIRT655731	hsa-miR-4768-3p	HITS-CLIP	23824327
MIRT655730	hsa-miR-4459	HITS-CLIP	23824327
MIRT655729	hsa-miR-4433a-3p	HITS-CLIP	23824327
MIRT655728	hsa-miR-5707	HITS-CLIP	23824327
MIRT655727	hsa-miR-1282	HITS-CLIP	23824327
MIRT655726	hsa-miR-3664-3p	HITS-CLIP	23824327
MIRT655725	hsa-miR-4649-3p	HITS-CLIP	23824327
MIRT655724	hsa-miR-1827	HITS-CLIP	23824327
MIRT655723	hsa-miR-485-5p	HITS-CLIP	23824327
MIRT655722	hsa-miR-6884-5p	HITS-CLIP	23824327
MIRT655721	hsa-miR-4722-5p	HITS-CLIP	23824327
MIRT655720	hsa-miR-7160-5p	HITS-CLIP	23824327
MIRT655719	hsa-miR-1304-5p	HITS-CLIP	23824327
MIRT655718	hsa-miR-665	HITS-CLIP	23824327
MIRT640038	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT640037	hsa-miR-3667-3p	HITS-CLIP	23824327
MIRT640036	hsa-miR-1915-5p	HITS-CLIP	23824327
MIRT640035	hsa-miR-4786-5p	HITS-CLIP	23824327
MIRT640034	hsa-miR-5189-3p	HITS-CLIP	23824327
MIRT640033	hsa-miR-192-3p	HITS-CLIP	23824327
MIRT490417	hsa-miR-4795-5p	PAR-CLIP	23592263
MIRT490416	hsa-miR-505-5p	PAR-CLIP	23592263
MIRT490415	hsa-miR-8071	PAR-CLIP	23592263
MIRT490413	hsa-miR-6880-5p	PAR-CLIP	23592263
MIRT490414	hsa-miR-3165	PAR-CLIP	23592263
MIRT490412	hsa-miR-520a-5p	PAR-CLIP	23592263
MIRT490411	hsa-miR-525-5p	PAR-CLIP	23592263
MIRT682431	hsa-miR-1910-3p	HITS-CLIP	23706177
MIRT682430	hsa-miR-6511a-5p	HITS-CLIP	23706177
MIRT682429	hsa-miR-4257	HITS-CLIP	23706177
MIRT655724	hsa-miR-1827	HITS-CLIP	23706177
MIRT667149	hsa-miR-377-5p	HITS-CLIP	23706177
MIRT667148	hsa-miR-6086	HITS-CLIP	23706177
MIRT682428	hsa-miR-2467-3p	HITS-CLIP	23706177
MIRT682427	hsa-miR-6499-3p	HITS-CLIP	23706177
MIRT682426	hsa-miR-6807-5p	HITS-CLIP	23706177
MIRT682425	hsa-miR-455-3p	HITS-CLIP	23706177
MIRT682424	hsa-miR-6516-5p	HITS-CLIP	23706177
MIRT655740	hsa-miR-512-5p	HITS-CLIP	23824327
MIRT655739	hsa-miR-510-5p	HITS-CLIP	23824327
MIRT655738	hsa-miR-4695-5p	HITS-CLIP	23824327
MIRT655737	hsa-miR-6808-5p	HITS-CLIP	23824327
MIRT655736	hsa-miR-6893-5p	HITS-CLIP	23824327
MIRT655735	hsa-miR-940	HITS-CLIP	23824327
MIRT655733	hsa-miR-3929	HITS-CLIP	23824327
MIRT655734	hsa-miR-4419b	HITS-CLIP	23824327
MIRT655732	hsa-miR-4478	HITS-CLIP	23824327
MIRT667151	hsa-miR-5690	HITS-CLIP	23824327
MIRT655731	hsa-miR-4768-3p	HITS-CLIP	23824327
MIRT655730	hsa-miR-4459	HITS-CLIP	23824327
MIRT655729	hsa-miR-4433a-3p	HITS-CLIP	23824327
MIRT655728	hsa-miR-5707	HITS-CLIP	23824327
MIRT655727	hsa-miR-1282	HITS-CLIP	23824327
MIRT655726	hsa-miR-3664-3p	HITS-CLIP	23824327
MIRT655725	hsa-miR-4649-3p	HITS-CLIP	23824327
MIRT655724	hsa-miR-1827	HITS-CLIP	23824327
MIRT655723	hsa-miR-485-5p	HITS-CLIP	23824327
MIRT655722	hsa-miR-6884-5p	HITS-CLIP	23824327
MIRT667150	hsa-miR-655-5p	HITS-CLIP	23824327
MIRT667149	hsa-miR-377-5p	HITS-CLIP	23824327
MIRT667148	hsa-miR-6086	HITS-CLIP	23824327
MIRT655721	hsa-miR-4722-5p	HITS-CLIP	23824327
MIRT655720	hsa-miR-7160-5p	HITS-CLIP	23824327
MIRT655719	hsa-miR-1304-5p	HITS-CLIP	23824327
MIRT655718	hsa-miR-665	HITS-CLIP	23824327
MIRT655740	hsa-miR-512-5p	HITS-CLIP	23824327
MIRT655739	hsa-miR-510-5p	HITS-CLIP	23824327
MIRT655738	hsa-miR-4695-5p	HITS-CLIP	23824327
MIRT655737	hsa-miR-6808-5p	HITS-CLIP	23824327
MIRT655736	hsa-miR-6893-5p	HITS-CLIP	23824327
MIRT655735	hsa-miR-940	HITS-CLIP	23824327
MIRT655733	hsa-miR-3929	HITS-CLIP	23824327
MIRT655734	hsa-miR-4419b	HITS-CLIP	23824327
MIRT655732	hsa-miR-4478	HITS-CLIP	23824327
MIRT667151	hsa-miR-5690	HITS-CLIP	23824327
MIRT655731	hsa-miR-4768-3p	HITS-CLIP	23824327
MIRT655730	hsa-miR-4459	HITS-CLIP	23824327
MIRT655729	hsa-miR-4433a-3p	HITS-CLIP	23824327
MIRT655728	hsa-miR-5707	HITS-CLIP	23824327
MIRT655727	hsa-miR-1282	HITS-CLIP	23824327
MIRT655726	hsa-miR-3664-3p	HITS-CLIP	23824327
MIRT655725	hsa-miR-4649-3p	HITS-CLIP	23824327
MIRT655724	hsa-miR-1827	HITS-CLIP	23824327
MIRT655723	hsa-miR-485-5p	HITS-CLIP	23824327
MIRT655722	hsa-miR-6884-5p	HITS-CLIP	23824327
MIRT667150	hsa-miR-655-5p	HITS-CLIP	23824327
MIRT667149	hsa-miR-377-5p	HITS-CLIP	23824327
MIRT667148	hsa-miR-6086	HITS-CLIP	23824327
MIRT655721	hsa-miR-4722-5p	HITS-CLIP	23824327
MIRT655720	hsa-miR-7160-5p	HITS-CLIP	23824327
MIRT655719	hsa-miR-1304-5p	HITS-CLIP	23824327
MIRT655718	hsa-miR-665	HITS-CLIP	23824327
MIRT667162	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT667161	hsa-miR-3940-3p	HITS-CLIP	23824327
MIRT667160	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT640038	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT667159	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT667158	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT667157	hsa-miR-4252	HITS-CLIP	23824327
MIRT667156	hsa-miR-1273a	HITS-CLIP	23824327
MIRT667155	hsa-miR-1227-3p	HITS-CLIP	23824327
MIRT667154	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT667153	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT667152	hsa-miR-7703	HITS-CLIP	23824327
MIRT655740	hsa-miR-512-5p	HITS-CLIP	23824327
MIRT655739	hsa-miR-510-5p	HITS-CLIP	23824327
MIRT655738	hsa-miR-4695-5p	HITS-CLIP	23824327
MIRT655737	hsa-miR-6808-5p	HITS-CLIP	23824327
MIRT655736	hsa-miR-6893-5p	HITS-CLIP	23824327
MIRT655735	hsa-miR-940	HITS-CLIP	23824327
MIRT655733	hsa-miR-3929	HITS-CLIP	23824327
MIRT655734	hsa-miR-4419b	HITS-CLIP	23824327
MIRT655732	hsa-miR-4478	HITS-CLIP	23824327
MIRT667151	hsa-miR-5690	HITS-CLIP	23824327
MIRT655731	hsa-miR-4768-3p	HITS-CLIP	23824327
MIRT655730	hsa-miR-4459	HITS-CLIP	23824327
MIRT655729	hsa-miR-4433a-3p	HITS-CLIP	23824327
MIRT655728	hsa-miR-5707	HITS-CLIP	23824327
MIRT655727	hsa-miR-1282	HITS-CLIP	23824327
MIRT655726	hsa-miR-3664-3p	HITS-CLIP	23824327
MIRT655725	hsa-miR-4649-3p	HITS-CLIP	23824327
MIRT655724	hsa-miR-1827	HITS-CLIP	23824327
MIRT655723	hsa-miR-485-5p	HITS-CLIP	23824327
MIRT655722	hsa-miR-6884-5p	HITS-CLIP	23824327
MIRT667150	hsa-miR-655-5p	HITS-CLIP	23824327
MIRT667149	hsa-miR-377-5p	HITS-CLIP	23824327
MIRT667148	hsa-miR-6086	HITS-CLIP	23824327
MIRT655721	hsa-miR-4722-5p	HITS-CLIP	23824327
MIRT655720	hsa-miR-7160-5p	HITS-CLIP	23824327
MIRT655719	hsa-miR-1304-5p	HITS-CLIP	23824327
MIRT655718	hsa-miR-665	HITS-CLIP	23824327
MIRT655740	hsa-miR-512-5p	HITS-CLIP	23824327
MIRT655739	hsa-miR-510-5p	HITS-CLIP	23824327
MIRT655738	hsa-miR-4695-5p	HITS-CLIP	23824327
MIRT655737	hsa-miR-6808-5p	HITS-CLIP	23824327
MIRT655736	hsa-miR-6893-5p	HITS-CLIP	23824327
MIRT655735	hsa-miR-940	HITS-CLIP	23824327
MIRT655733	hsa-miR-3929	HITS-CLIP	23824327
MIRT655734	hsa-miR-4419b	HITS-CLIP	23824327
MIRT655732	hsa-miR-4478	HITS-CLIP	23824327
MIRT655731	hsa-miR-4768-3p	HITS-CLIP	23824327
MIRT655730	hsa-miR-4459	HITS-CLIP	23824327
MIRT655729	hsa-miR-4433a-3p	HITS-CLIP	23824327
MIRT655728	hsa-miR-5707	HITS-CLIP	23824327
MIRT655727	hsa-miR-1282	HITS-CLIP	23824327
MIRT655726	hsa-miR-3664-3p	HITS-CLIP	23824327
MIRT655725	hsa-miR-4649-3p	HITS-CLIP	23824327
MIRT655724	hsa-miR-1827	HITS-CLIP	23824327
MIRT655723	hsa-miR-485-5p	HITS-CLIP	23824327
MIRT655722	hsa-miR-6884-5p	HITS-CLIP	23824327
MIRT655721	hsa-miR-4722-5p	HITS-CLIP	23824327
MIRT655720	hsa-miR-7160-5p	HITS-CLIP	23824327
MIRT655719	hsa-miR-1304-5p	HITS-CLIP	23824327
MIRT655718	hsa-miR-665	HITS-CLIP	23824327
MIRT640038	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT640037	hsa-miR-3667-3p	HITS-CLIP	23824327
MIRT640036	hsa-miR-1915-5p	HITS-CLIP	23824327
MIRT640035	hsa-miR-4786-5p	HITS-CLIP	23824327
MIRT640034	hsa-miR-5189-3p	HITS-CLIP	23824327
MIRT640033	hsa-miR-192-3p	HITS-CLIP	23824327
MIRT490417	hsa-miR-4795-5p	PAR-CLIP	23592263
MIRT490416	hsa-miR-505-5p	PAR-CLIP	23592263
MIRT490415	hsa-miR-8071	PAR-CLIP	23592263
MIRT490413	hsa-miR-6880-5p	PAR-CLIP	23592263
MIRT490414	hsa-miR-3165	PAR-CLIP	23592263
MIRT490412	hsa-miR-520a-5p	PAR-CLIP	23592263
MIRT490411	hsa-miR-525-5p	PAR-CLIP	23592263
MIRT1194588	hsa-miR-1237	CLIP-seq
MIRT1194589	hsa-miR-1283	CLIP-seq
MIRT1194590	hsa-miR-129-5p	CLIP-seq
MIRT1194591	hsa-miR-150	CLIP-seq
MIRT1194592	hsa-miR-25	CLIP-seq
MIRT1194593	hsa-miR-3120-5p	CLIP-seq
MIRT1194594	hsa-miR-3128	CLIP-seq
MIRT1194595	hsa-miR-3155	CLIP-seq
MIRT1194596	hsa-miR-3155b	CLIP-seq
MIRT1194597	hsa-miR-3182	CLIP-seq
MIRT1194598	hsa-miR-3189-5p	CLIP-seq
MIRT1194599	hsa-miR-32	CLIP-seq
MIRT1194600	hsa-miR-3622b-5p	CLIP-seq
MIRT1194601	hsa-miR-363	CLIP-seq
MIRT1194602	hsa-miR-3664-5p	CLIP-seq
MIRT1194603	hsa-miR-367	CLIP-seq
MIRT1194604	hsa-miR-409-5p	CLIP-seq
MIRT1194605	hsa-miR-4325	CLIP-seq
MIRT1194606	hsa-miR-4713-5p	CLIP-seq
MIRT1194607	hsa-miR-4714-5p	CLIP-seq
MIRT1194608	hsa-miR-4720-5p	CLIP-seq
MIRT1194609	hsa-miR-4758-3p	CLIP-seq
MIRT1194610	hsa-miR-4760-5p	CLIP-seq
MIRT1194611	hsa-miR-4797-5p	CLIP-seq
MIRT1194612	hsa-miR-4799-3p	CLIP-seq
MIRT1194613	hsa-miR-484	CLIP-seq
MIRT1194614	hsa-miR-532-3p	CLIP-seq
MIRT1194615	hsa-miR-582-5p	CLIP-seq
MIRT1194616	hsa-miR-92a	CLIP-seq
MIRT1194617	hsa-miR-92b	CLIP-seq
MIRT1194618	hsa-miR-203	CLIP-seq
MIRT1194619	hsa-miR-3915	CLIP-seq
MIRT1194620	hsa-miR-3928	CLIP-seq
MIRT1194621	hsa-miR-4440	CLIP-seq
MIRT1194622	hsa-miR-577	CLIP-seq
MIRT1920697	hsa-miR-214	CLIP-seq
MIRT1920698	hsa-miR-3120-3p	CLIP-seq
MIRT1920699	hsa-miR-3619-5p	CLIP-seq
MIRT1920700	hsa-miR-761	CLIP-seq
MIRT2056544	hsa-miR-1236	CLIP-seq
MIRT2056545	hsa-miR-1273g	CLIP-seq
MIRT2056546	hsa-miR-2113	CLIP-seq
MIRT2284995	hsa-miR-592	CLIP-seq
MIRT2284996	hsa-miR-597	CLIP-seq
MIRT2455474	hsa-miR-3202	CLIP-seq
MIRT2455475	hsa-miR-4533	CLIP-seq
MIRT2455476	hsa-miR-4694-3p	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0001525	Process	Angiogenesis	IEA
GO:0001525	Process	Angiogenesis	ISS
GO:0004888	Function	Transmembrane signaling receptor activity	NAS	18923512
GO:0005515	Function	Protein binding	IPI	32296183
GO:0005886	Component	Plasma membrane	IEA
GO:0005886	Component	Plasma membrane	TAS
GO:0007155	Process	Cell adhesion	IEA
GO:0007158	Process	Neuron cell-cell adhesion	IEA
GO:0007158	Process	Neuron cell-cell adhesion	TAS	18923512
GO:0007165	Process	Signal transduction	NAS	18923512
GO:0007399	Process	Nervous system development	IEA
GO:0007411	Process	Axon guidance	TAS
GO:0007612	Process	Learning	IEA
GO:0007612	Process	Learning	IGI	22209245
GO:0016020	Component	Membrane	IEA
GO:0030534	Process	Adult behavior	IEA
GO:0030534	Process	Adult behavior	IGI	22209245
GO:0035176	Process	Social behavior	IEA
GO:0035176	Process	Social behavior	IGI	22209245
GO:0038023	Function	Signaling receptor activity	TAS
GO:0042734	Component	Presynaptic membrane	IEA
GO:0042734	Component	Presynaptic membrane	ISS
GO:0042995	Component	Cell projection	IEA
GO:0045202	Component	Synapse	IEA
GO:0046872	Function	Metal ion binding	IEA
GO:0050839	Function	Cell adhesion molecule binding	TAS	18923512
GO:0071625	Process	Vocalization behavior	IEA
GO:0071625	Process	Vocalization behavior	IGI	22209245
GO:0097109	Function	Neuroligin family protein binding	TAS	18923512
GO:0098820	Component	Trans-synaptic protein complex	ISS

Other IDs

• MIM: 600567
• HGNC: 8010
• e!Ensembl: ENSG00000021645

Protein

• UniProt ID: Q9HDB5
• Protein name: Neurexin-3-beta (Neurexin III-beta) [Cleaved into: Neurexin-3-beta, soluble form; Neurexin-3-beta, C-terminal fragment (NRXN3-CTF)]
• Protein function: Neuronal cell surface protein that may be involved in cell recognition and cell adhesion. May mediate intracellular signaling (By similarity). Functions as part of a trans-synaptic complex by binding to cerebellins and postsynaptic GRID1. This i
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF02210	Laminin_G_2	117 → 236	Laminin G domain	Domain
  PF01034	Syndecan	554 → 634	Syndecan domain	Family

• Tissue specificity: TISSUE SPECIFICITY: Expressed in the blood vessel walls (at protein level). {ECO:0000269|PubMed:19926856}.
• Sequence:

  MHLRIHARRSPPRRPAWTLGIWFLFWGCIVSSVWSSSNVASSSSTSSSPGSHSQHEHHFH
  GSKHHSVPISIYRSPVSLRGGHAGATYIFGKSGGLILYTWPANDRPSTRSDRLAVGFSTT
  VKDGILVRIDSAPGLGDFLQLHIEQGKIGVVFNIGTVDISIKEERTPVNDGKYHVVRFTR
  NGGNATLQVDNWPVNEHYPTGRQLTIFNTQAQIAIGGKDKGRLFQGQLSGLYYDGLKVLN
  MAAENNPNIKINGSVRLVGEVPSILGTTQTTSMPPEMSTTVMETTTTMATTTTRKNRSTA
  SIQPTSDDLVSSAECSSDDEDFVECEPSTGGELVIPLLVEDPLATPPIATRAPSITLPPT
  FRPLLTIIETTKDSLSMTSEAGLPCLSDQGSDGCDDDGLVISGYGSGETFDSNLPPTDDE
  DFYTTFSLVTDKSLSTSIFEGGYKAHAPKWESKDFRPNKVSETSRTTTTSLSPELIRFTA
  SSSSGMVPKLPAGKMNNRDLKPQPDIVLLPLPTAYELDSTKLKSPLITSPMFRNVPTANP
  TEPGIRRVPGASEVIRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYQVDETR
  NYISNSAQSNGTLMKEKQQSSKSGHKKQKNKDREYYV

• Sequence length: 637
• UniProt ID: Q9Y4C0
• Protein name: Neurexin-3 (Neurexin III-alpha) (Neurexin-3-alpha)
• Protein function: Neuronal cell surface protein that may be involved in cell recognition and cell adhesion. May mediate intracellular signaling (By similarity).
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF02210	Laminin_G_2	55 → 184	Laminin G domain	Domain
  PF02210	Laminin_G_2	287 → 413	Laminin G domain	Domain
  PF02210	Laminin_G_2	475 → 619	Laminin G domain	Domain
  PF00008	EGF	647 → 678	EGF-like domain	Domain
  PF02210	Laminin_G_2	713 → 843	Laminin G domain	Domain
  PF02210	Laminin_G_2	899 → 1027	Laminin G domain	Domain
  PF02210	Laminin_G_2	1122 → 1241	Laminin G domain	Domain
  PF01034	Syndecan	1560 → 1626	Syndecan domain	Family

• Tissue specificity: TISSUE SPECIFICITY: Expressed in the blood vessel walls (at protein level). Highly expressed in brain, lung, and pancreas; a lower level of expression is detectable in heart, placenta, liver, and kidney, whereas no expression can be observed in skeletal m
• Sequence:

  MSSTLHSVFFTLKVSILLGSLLGLCLGLEFMGLPNQWARYLRWDASTRSDLSFQFKTNVS
  TGLLLYLDDGGVCDFLCLSLVDGRVQLRFSMDCAETAVLSNKQVNDSSWHFLMVSRDRLR
  TVLMLDGEGQSGELQPQRPYMDVVSDLFLGGVPTDIRPSALTLDGVQAMPGFKGLILDLK
  YGNSEPRLLGSRGVQMDAEGPCGERPCENGGICFLLDGHPTCDCSTTGYGGKLCSEDVSQ
  DPGLSHLMMSEQAREENVATFRGSEYLCYDLSQNPIQSSSDEITLSFKTWQRNGLILHTG
  KSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDVKVTRNLRQVTISVDG
  ILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDIRLELS
  RLARIADTKMKIYGEVVFKCENVATLDPINFETPEAYISLPKWNTKRMGSISFDFRTTEP
  NGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGNLYLLLDMGSGTIKVKATQKKANDG
  EWYHVDIQRDGRSGTISVNSRRTPFTASGESEILDLEGDMYLGGLPENRAGLILPTELWT
  AMLNYGYVGCIRDLFIDGRSKNIRQLAEMQNAAGVKSSCSRMSAKQCDSYPCKNNAVCKD
  GWNRFICDCTGTGYWGRTCEREASILSYDGSMYMKIIMPMVMHTEAEDVSFRFMSQRAYG
  LLVATTSRDSADTLRLELDGGRVKLMVNLDCIRINCNSSKGPETLYAGQKLNDNEWHTVR
  VVRRGKSLKLTVDDDVAEGTMVGDHTRLEFHNIETGIMTEKRYISVVPSSFIGHLQSLMF
  NGLLYIDLCKNGDIDYCELKARFGLRNIIADPVTFKTKSSYLSLATLQAYTSMHLFFQFK
  TTSPDGFILFNSGDGNDFIAVELVKGYIHYVFDLGNGPNVIKGNSDRPLNDNQWHNVVIT
  RDNSNTHSLKVDTKVVTQVINGAKNLDLKGDLYMAGLAQGMYSNLPKLVASRDGFQGCLA
  SVDLNGRLPDLINDALHRSGQIERGCEGPSTTCQEDSCANQGVCMQQWEGFTCDCSMTSY
  SGNQCNDPGATYIFGKSGGLILYTWPANDRPSTRSDRLAVGFSTTVKDGILVRIDSAPGL
  GDFLQLHIEQGKIGVVFNIGTVDISIKEERTPVNDGKYHVVRFTRNGGNATLQVDNWPVN
  EHYPTGRQLTIFNTQAQIAIGGKDKGRLFQGQLSGLYYDGLKVLNMAAENNPNIKINGSV
  RLVGEVPSILGTTQTTSMPPEMSTTVMETTTTMATTTTRKNRSTASIQPTSDDLVSSAEC
  SSDDEDFVECEPSTTGGELVIPLLVEDPLATPPIATRAPSITLPPTFRPLLTIIETTKDS
  LSMTSEAGLPCLSDQGSDGCDDDGLVISGYGSGETFDSNLPPTDDEDFYTTFSLVTDKSL
  STSIFEGGYKAHAPKWESKDFRPNKVSETSRTTTTSLSPELIRFTASSSSGMVPKLPAGK
  MNNRDLKPQPDIVLLPLPTAYELDSTKLKSPLITSPMFRNVPTANPTEPGIRRVPGASEV
  IRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYQVDETRNYISNSAQSNGTLM
  KEKQQSSKSGHKKQKNKDREYYV

• Sequence length: 1643

Pathways

KEGG:

Cell adhesion molecules

Reactome:

Neurexins and neuroligins

Associated diseases

Causal
Phenotype Name	Clinical Significance	dbSNP ID	RCV Accession
Relative macrocephaly	Pathogenic	rs1057519451	RCV000416434
Short stature	Pathogenic	rs1057519451	RCV000416434

Unknown
Phenotype Name	Clinical Significance	dbSNP ID	RCV Accession
Autism	Benign; Uncertain significance	rs117696080, rs12432103	RCV000722090 RCV000722091
Autism spectrum disorder	Uncertain significance; Likely benign	rs1362976615, rs755709938	RCV003127265 RCV003127266
NRXN3-associated neurodevelopmental disorder	Uncertain significance	rs769211538	RCV004799376
NRXN3-related disorder	Uncertain significance; Likely benign; Benign	rs2510812714, rs969254493, rs760723868, rs61738630, rs369075241, rs780548844, rs34083173, rs10603296, rs374407933, rs772146074, rs764303359, rs2503399052, rs766184400, rs1248179449, rs139723044, rs771791112, rs1034245105, rs1036198630, rs1567817019, rs531244597, rs138817150, rs2097675391, rs140907035, rs778188448, rs371317781, rs141234557, rs773225464, rs202029628, rs556818436, rs367867090	RCV003429083 RCV003391365 RCV003414572 RCV003980889 RCV003909387 RCV003921725 RCV003914697 RCV003974058 RCV003979459 RCV003899489 RCV003911407 RCV003911507 RCV003934529 RCV003931742 RCV003927307 RCV003949622 RCV003949629 RCV003949719 RCV003944461 RCV003914537 RCV003951400 RCV003934734 RCV003922315 RCV003924253 RCV003926833 RCV003932143 RCV003936825 RCV003944268 RCV003946773 RCV003967021 RCV003959857

Associations from Text Mining
Disease Name	Relationship Type	References
Adenocarcinoma	Associate	23301059
Alzheimer Disease	Associate	30902061
Autism Spectrum Disorder	Associate	22209245, 22543975, 30559312, 37372397
Autistic Disorder	Associate	21647150, 22209245, 30076746, 30902061, 37372397
Borderline Personality Disorder	Associate	23245376
Brain Diseases	Associate	24265751
Breast Neoplasms	Associate	21688152
Carbon Monoxide Poisoning	Associate	24265751
Carcinogenesis	Associate	21688152, 23301059
Carcinoma Hepatocellular	Associate	22997493
Carcinoma Non Small Cell Lung	Associate	22872573
Central Nervous System Diseases	Associate	19557197
Chromosomal Instability	Associate	23245376
Congenital Abnormalities	Associate	18978678
Depressive Disorder Major	Inhibit	32398672
Developmental Disabilities	Associate	30559312, 37372397
Facial Dysmorphism with Multiple Malformations	Associate	30076746
Glioblastoma	Associate	35429411
Graves Disease	Associate	23118423
Hirschsprung Disease	Associate	29622757
Hypertension	Associate	25189868
Leukemia Myeloid Acute	Associate	30558617
Leukemic Infiltration	Associate	30558617
Mental Disorders	Associate	30076746, 30976086
Nasopharyngeal Carcinoma	Associate	33038291
Nerve Degeneration	Associate	30902061
Obesity	Associate	19557197, 21552555, 21674055, 21688152, 21779088, 23349760, 23408508, 27771443
Pancreatic Neoplasms	Associate	38049855
Philadelphia Chromosome	Associate	37819686
Precursor Cell Lymphoblastic Leukemia Lymphoma	Associate	37819686
Schizophrenia	Associate	30076746, 30902061
Substance Related Disorders	Associate	19557197, 30902061, 34647286, 34750790
Tobacco Use Disorder	Associate	34647286, 34750790
Voice Disorders	Associate	23245376