Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
92935
Gene name Gene Name - the full gene name approved by the HGNC.
Methionyl-tRNA synthetase 2, mitochondrial
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
MARS2
Synonyms (NCBI Gene) Gene synonyms aliases
COXPD25, MetRS, mtMetRS
Disease Acronyms (UniProt) Disease acronyms from UniProt database
COXPD25
Chromosome Chromosome number
2
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
2q33.1
Summary Summary of gene provided in NCBI Entrez Gene.
This gene produces a mitochondrial methionyl-tRNA synthetase protein that is encoded by the nuclear genome and imported to the mitochondrion. This protein likely functions as a monomer and is predicted to localize to the mitochondrial matrix. Mutations in
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs754121141 C>T Likely-pathogenic Coding sequence variant, missense variant
rs757649757 A>G Likely-pathogenic Missense variant, coding sequence variant
rs794726869 C>T Pathogenic Coding sequence variant, stop gained
rs794726870 C>T Pathogenic Coding sequence variant, missense variant
rs1340079929 G>- Likely-pathogenic Frameshift variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT001618 hsa-let-7b-5p pSILAC 18668040
MIRT045487 hsa-miR-149-5p CLASH 23622248
MIRT564172 hsa-miR-3173-3p PAR-CLIP 20371350
MIRT564170 hsa-miR-6891-5p PAR-CLIP 20371350
MIRT564171 hsa-miR-4695-5p PAR-CLIP 20371350
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0004825 Function Methionine-tRNA ligase activity IBA 21873635
GO:0004825 Function Methionine-tRNA ligase activity IDA 15274629
GO:0004825 Function Methionine-tRNA ligase activity TAS
GO:0005524 Function ATP binding IEA
GO:0005759 Component Mitochondrial matrix IDA 15274629
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
609728 25133 ENSG00000247626
Protein
UniProt ID Q96GW9
Protein name Methionine--tRNA ligase, mitochondrial (EC 6.1.1.10) (Methionyl-tRNA synthetase 2) (Mitochondrial methionyl-tRNA synthetase) (MtMetRS)
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF09334 tRNA-synt_1g 45 411 tRNA synthetases class I (M) Family
Sequence
Sequence length 593
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Selenocompound metabolism
Aminoacyl-tRNA biosynthesis
Metabolic pathways
  Mitochondrial tRNA aminoacylation
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Ataxia Ataxia, Spastic, 3, Autosomal Recessive rs606231134, rs119103243, rs119103244, rs119103245, rs606231135, rs119468005, rs119468006, rs387906298, rs606231138, rs606231139, rs119468008, rs387906299, rs606231292, rs1553281318, rs794727986
View all (52 more)
27604308, 22448145, 16672289, 25754315
Cerebellar ataxia Progressive cerebellar ataxia rs28936415, rs199476133, rs540331226, rs797046006, rs863224069, rs138358708, rs1057519429, rs750959420, rs1568440440, rs1597846084, rs759460806, rs761486324, rs1240335250, rs1596489887
Combined oxidative phosphorylation deficiency COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 25, Combined oxidative phosphorylation defect type 25 rs587776508, rs576462794, rs118203917, rs387906327, rs139430866, rs387906962, rs138119149, rs387907061, rs1562800908, rs397515421, rs397514598, rs397514610, rs397514611, rs397514612, rs201431517
View all (155 more)
25754315
Developmental delay Global developmental delay rs28941770, rs199469464, rs281865469, rs143747297, rs398123009, rs587777428, rs786205133, rs606231459, rs797044854, rs797045027, rs864309504, rs878853160, rs886039902, rs886042046, rs886041291
View all (32 more)
Unknown
Disease term Disease name Evidence References Source
Spastic Ataxia spastic ataxia 3 GenCC
Mitochondrial Diseases mitochondrial disease GenCC
Ischemic Stroke Ischemic Stroke GWAS
Associations from Text Mining
Disease Name Relationship Type References
Breast Neoplasms Associate 39380996
Carcinoma Non Small Cell Lung Associate 36774778
Developmental Disabilities Associate 25754315
Hearing Loss Sensorineural Associate 25754315
Mitochondrial Diseases Associate 25754315, 39874649
Muscle Hypotonia Associate 25754315
Parkinson Disease Associate 33276480
Pectus Carinatum Associate 25754315
Pulmonary Alveolar Proteinosis Associate 34503986