Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
91801
Gene name Gene Name - the full gene name approved by the HGNC.
AlkB homolog 8, tRNA methyltransferase
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
ALKBH8
Synonyms (NCBI Gene) Gene synonyms aliases
ABH8, MRT71, TRM9, TRMT9, TRMT9A
Disease Acronyms (UniProt) Disease acronyms from UniProt database
MRT71
Chromosome Chromosome number
11
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
11q22.3
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs375189195 G>A,C,T Pathogenic Missense variant, stop gained, genic downstream transcript variant, non coding transcript variant, coding sequence variant, synonymous variant
rs1591234203 G>- Pathogenic Coding sequence variant, frameshift variant, genic downstream transcript variant, non coding transcript variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT778856 hsa-miR-3143 CLIP-seq
MIRT778857 hsa-miR-3686 CLIP-seq
MIRT778858 hsa-miR-371-5p CLIP-seq
MIRT778859 hsa-miR-371b-5p CLIP-seq
MIRT778860 hsa-miR-4668-3p CLIP-seq
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000049 Function TRNA binding IBA 21873635
GO:0000049 Function TRNA binding IDA 22065580
GO:0002098 Process TRNA wobble uridine modification IBA 21873635
GO:0002098 Process TRNA wobble uridine modification IDA 21285950
GO:0002098 Process TRNA wobble uridine modification IMP 31079898
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
613306 25189 ENSG00000137760
Protein
UniProt ID Q96BT7
Protein name tRNA (carboxymethyluridine(34)-5-O)-methyltransferase ALKBH8 (EC 2.1.1.229) (Alkylated DNA repair protein alkB homolog 8) (Alpha-ketoglutarate-dependent dioxygenase ALKBH8) (S-adenosyl-L-methionine-dependent tRNA methyltransferase ALKBH8)
Protein function Catalyzes the methylation of 5-carboxymethyl uridine to 5-methylcarboxymethyl uridine at the wobble position of the anticodon loop in tRNA via its methyltransferase domain (PubMed:20123966, PubMed:20308323, PubMed:31079898). Catalyzes the last s
PDB 2CQ2 , 3THP , 3THT
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF09004 DUF1891 1 37 Domain of unknown function (DUF1891) Domain
PF13532 2OG-FeII_Oxy_2 136 334 2OG-Fe(II) oxygenase superfamily Domain
PF08241 Methyltransf_11 411 501 Methyltransferase domain Domain
Tissue specificity TISSUE SPECIFICITY: Widely expressed, with highest expression in spleen, followed by pancreas and lung. {ECO:0000269|PubMed:17979886}.
Sequence
MDSNHQSNYKLSKTEKKFLRKQIKAKHTLLRHEGIETVSYATQSLVVANGGLGNGVSRNQ
LLPVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAYVTLNGKEVVDDLGQKITLYLNFV
EKVQWKELRPQALPPGLMVVEEIISSEEEKMLLESVDWTEDTDNQNSQKSLKHRRVKHFG
YEFHYENNNVDKDKPLSGGLPDICESFLEKWLRKGYIKHKPDQMTINQYEPGQGIPAHID
THSAFEDEIVSLSLGSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHGITCRKFD
TVQASESLKSGIITSDVGDLTLSKRGLRTSFTFR
KVRQTPCNCSYPLVCDSQRKETPPSF
PESDKEASRLEQEYVHQVYEEIAGHFSSTRHTPWPHIVEFLKALPSGSIVADIGCGNGKY
LGINKELYMIGCDRSQNLVDICRERQFQAFVCDALAVPVRSGSCDACISIAVIHHFATAE
RRVAALQEIVRLLRPGGKALI
YVWAMEQEYNKQKSKYLRGNRNSQGKKEEMNSDTSVQRS
LVEQMRDMGSRDSASSVPRINDSQEGGCNSRQVSNSKLPVHVNRTSFYSQDVLVPWHLKG
NPDKGKPVEPFGPIGSQDPSPVFHRYYHVFREGELEGACRTVSDVRILQSYYDQGNWCVI
LQKA
Sequence length 664
Interactions View interactions
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Attention deficit hyperactivity disorder Attention deficit hyperactivity disorder rs786205019
Breast cancer Malignant neoplasm of breast rs587776547, rs1137887, rs137853007, rs587776650, rs80359351, rs80359714, rs121917783, rs104886456, rs121964878, rs80359874, rs80357868, rs80357508, rs387906843, rs80357569, rs80358158
View all (309 more)
27811057
Breast carcinoma Breast Carcinoma rs80359671, rs11540652, rs28934575, rs28897672, rs137886232, rs193922376, rs80357783, rs80359306, rs80359405, rs80359507, rs80359598, rs80358429, rs397507683, rs397515636, rs80359451
View all (71 more)
27811057
Cryptorchidism Cryptorchidism rs121912555, rs104894697, rs104894698, rs398122886
Unknown
Disease term Disease name Evidence References Source
Non-Syndromic Intellectual Disability autosomal recessive non-syndromic intellectual disability GenCC
Insomnia Insomnia GWAS
Associations from Text Mining
Disease Name Relationship Type References
Cognitive Dysfunction Associate 31079898
Congenital Abnormalities Associate 33544954
Deafness Autosomal Recessive 71 Associate 33544954
Developmental Disabilities Associate 33544954
Disease Associate 33544954
Intellectual Disability Associate 31079898, 33544954
Mental Retardation Autosomal Recessive 7 Associate 33544954
Osteoarthritis Associate 37006267
Syndrome Associate 33544954