Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
9154
Gene name Gene Name - the full gene name approved by the HGNC.
Solute carrier family 28 member 1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
SLC28A1
Synonyms (NCBI Gene) Gene synonyms aliases
CNT1, HCNT1, URCTU
Disease Acronyms (UniProt) Disease acronyms from UniProt database
URCTU
Chromosome Chromosome number
15
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
15q25.3
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs2242047 C>T Affects Coding sequence variant, missense variant, downstream transcript variant, genic downstream transcript variant, intron variant, non coding transcript variant
rs45584739 T>C Affects Intron variant, missense variant, genic downstream transcript variant, coding sequence variant
rs149246522 G>A Affects Missense variant, genic downstream transcript variant, coding sequence variant, intron variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT030057 hsa-miR-26b-5p Microarray 19088304
MIRT633665 hsa-miR-1224-3p HITS-CLIP 23824327
MIRT633664 hsa-miR-371b-5p HITS-CLIP 23824327
MIRT633663 hsa-miR-373-5p HITS-CLIP 23824327
MIRT633662 hsa-miR-616-5p HITS-CLIP 23824327
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005337 Function Nucleoside transmembrane transporter activity IBA 21873635
GO:0005345 Function Purine nucleobase transmembrane transporter activity NAS 22492015
GO:0005415 Function Nucleoside:sodium symporter activity IBA 21873635
GO:0005415 Function Nucleoside:sodium symporter activity TAS
GO:0005829 Component Cytosol IDA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
606207 11001 ENSG00000156222
Protein
UniProt ID O00337
Protein name Sodium/nucleoside cotransporter 1 (Concentrative nucleoside transporter 1) (CNT 1) (hCNT1) (Na(+)/nucleoside cotransporter 1) (Sodium-coupled nucleoside transporter 1) (Solute carrier family 28 member 1)
Protein function Sodium and pyrimidine nucleoside symporter of the plasma membrane that imports uridine, thymidine and cytidine into cells by coupling their transport to the transmembrane sodium electrochemical gradient. Also transports adenosine, an atypical su
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01773 Nucleos_tra2_N 183 256 Na+ dependent nucleoside transporter N-terminus Family
PF07670 Gate 263 382 Nucleoside recognition Domain
PF07662 Nucleos_tra2_C 366 590 Na+ dependent nucleoside transporter C-terminus Family
Tissue specificity TISSUE SPECIFICITY: Expressed in kidney. {ECO:0000269|PubMed:9124315}.
Sequence
MENDPSRRRESISLTPVAKGLENMGADFLESLEEGQLPRSDLSPAEIRSSWSEAAPKPFS
RWRNLQPALRARSFCREHMQLFRWIGTGLLCTGLSAFLLVACLLDFQRALALFVLTCVVL
TFLGHRLLKRLLGPKLRRFLKPQGHPRLLLWFKRGLALAAFLGLVLWLSLDTSQRPEQLV
SFAGICVFVALLFACSKHHCAVSWRAVSWGLGLQFVLGLLVIRTEPGFIAFEWLGEQIRI
FLSYTKAGSSFVFGEA
LVKDVFAFQVLPIIVFFSCVISVLYHVGLMQWVILKIAWLMQVT
MGTTATETLSVAGNIFVSQTEAPLLIRPYLADMTLSEVHVVMTGGYATIAGSLLGAYISF
GIDAT
SLIAASVMAAPCALALSKLVYPEVEESKFRREEGVKLTYGDAQNLIEAASTGAAI
SVKVVANIAANLIAFLAVLDFINAALSWLGDMVDIQGLSFQLICSYILRPVAFLMGVAWE
DCPVVAELLGIKLFLNEFVAYQDLSKYKQRRLAGAEEWVGDRKQWISVRAEVLTTFALCG
FANFSSIGIMLGGLTSMVPQRKSDFSQIVLRALFTGACVSLVNACMAGIL
YMPRGAEVDC
MSLLNTTLSSSSFEIYQCCREAFQSVNPEFSPEALDNCCRFYNHTICAQ
Sequence length 649
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Transport of nucleosides and free purine and pyrimidine bases across the plasma membrane
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Breast cancer Malignant neoplasm of breast rs587776547, rs1137887, rs137853007, rs587776650, rs80359351, rs80359714, rs121917783, rs104886456, rs121964878, rs80359874, rs80357868, rs80357508, rs387906843, rs80357569, rs80358158
View all (309 more)
16837820
Breast carcinoma Breast Carcinoma rs80359671, rs11540652, rs28934575, rs28897672, rs137886232, rs193922376, rs80357783, rs80359306, rs80359405, rs80359507, rs80359598, rs80358429, rs397507683, rs397515636, rs80359451
View all (71 more)
16837820
Marfan syndrome Mammary Carcinoma, Human rs137854456, rs137854457, rs267606796, rs137854458, rs137854459, rs137854460, rs137854470, rs137854471, rs267606797, rs137854461, rs137854462, rs137854463, rs869025419, rs137854464, rs137854465
View all (942 more)
16837820
Unknown
Disease term Disease name Evidence References Source
Cerebral amyloid angiopathy Cerebral amyloid angiopathy GWAS
Psoriasis Psoriasis GWAS
Associations from Text Mining
Disease Name Relationship Type References
Autistic Disorder Associate 36150388
Carcinoma Renal Cell Associate 25600708
Colorectal Neoplasms Associate 34647142
Dykes Markes Harper syndrome Associate 30658162
Fever Associate 30658162
Hemophagocytic lymphohistiocytosis familial 2 Associate 30658162
Hereditary Sensory and Autonomic Neuropathies Associate 30273369
HIV Infections Associate 25069476
Immunologic Deficiency Syndromes Inhibit 30658162
Immunologic Deficiency Syndromes Associate 30658162