RCCD1 (RCC1 domain containing 1)

Gene

• Entrez ID: 91433
• Gene name: RCC1 domain containing 1
• Gene symbol: RCCD1
• Synonyms (NCBI Gene): -
• Chromosome: 15
• Chromosome location: 15q26.1

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT044333	hsa-miR-106b-5p	CLASH	23622248
MIRT044333	hsa-miR-106b-5p	HITS-CLIP	22473208
MIRT141698	hsa-miR-20a-5p	HITS-CLIP	22473208
MIRT044333	hsa-miR-106b-5p	HITS-CLIP	22473208
MIRT141697	hsa-miR-17-5p	HITS-CLIP	22473208
MIRT141717	hsa-miR-20b-5p	HITS-CLIP	22473208
MIRT141699	hsa-miR-93-5p	HITS-CLIP	22473208
MIRT141723	hsa-miR-519d-3p	HITS-CLIP	22473208
MIRT141698	hsa-miR-20a-5p	HITS-CLIP	22473208
MIRT1298115	hsa-miR-105	CLIP-seq
MIRT1298116	hsa-miR-1207-3p	CLIP-seq
MIRT1298117	hsa-miR-1255a	CLIP-seq
MIRT1298118	hsa-miR-1255b	CLIP-seq
MIRT1298119	hsa-miR-1293	CLIP-seq
MIRT1298120	hsa-miR-140-3p	CLIP-seq
MIRT1298121	hsa-miR-142-5p	CLIP-seq
MIRT1298122	hsa-miR-186	CLIP-seq
MIRT1298123	hsa-miR-192	CLIP-seq
MIRT1298124	hsa-miR-215	CLIP-seq
MIRT1298125	hsa-miR-216a	CLIP-seq
MIRT1298126	hsa-miR-3121-3p	CLIP-seq
MIRT1298127	hsa-miR-3133	CLIP-seq
MIRT1298128	hsa-miR-3136-5p	CLIP-seq
MIRT1298129	hsa-miR-340	CLIP-seq
MIRT1298130	hsa-miR-3660	CLIP-seq
MIRT1298131	hsa-miR-4439	CLIP-seq
MIRT1298132	hsa-miR-4483	CLIP-seq
MIRT1298133	hsa-miR-4513	CLIP-seq
MIRT1298134	hsa-miR-4526	CLIP-seq
MIRT1298135	hsa-miR-4633-3p	CLIP-seq
MIRT1298136	hsa-miR-4639-5p	CLIP-seq
MIRT1298137	hsa-miR-4643	CLIP-seq
MIRT1298138	hsa-miR-4719	CLIP-seq
MIRT1298139	hsa-miR-4742-5p	CLIP-seq
MIRT1298140	hsa-miR-502-5p	CLIP-seq
MIRT1298141	hsa-miR-619	CLIP-seq
MIRT1298142	hsa-let-7a	CLIP-seq
MIRT1298143	hsa-let-7b	CLIP-seq
MIRT1298144	hsa-let-7c	CLIP-seq
MIRT1298145	hsa-let-7d	CLIP-seq
MIRT1298146	hsa-let-7e	CLIP-seq
MIRT1298147	hsa-let-7f	CLIP-seq
MIRT1298148	hsa-let-7g	CLIP-seq
MIRT1298149	hsa-let-7i	CLIP-seq
MIRT1298150	hsa-miR-1	CLIP-seq
MIRT1298115	hsa-miR-105	CLIP-seq
MIRT1298151	hsa-miR-106a	CLIP-seq
MIRT1298152	hsa-miR-106b	CLIP-seq
MIRT1298116	hsa-miR-1207-3p	CLIP-seq
MIRT1298153	hsa-miR-1228	CLIP-seq
MIRT1298117	hsa-miR-1255a	CLIP-seq
MIRT1298118	hsa-miR-1255b	CLIP-seq
MIRT1298154	hsa-miR-1273e	CLIP-seq
MIRT1298155	hsa-miR-1286	CLIP-seq
MIRT1298119	hsa-miR-1293	CLIP-seq
MIRT1298156	hsa-miR-1305	CLIP-seq
MIRT1298121	hsa-miR-142-5p	CLIP-seq
MIRT1298157	hsa-miR-17	CLIP-seq
MIRT1298122	hsa-miR-186	CLIP-seq
MIRT1298123	hsa-miR-192	CLIP-seq
MIRT1298158	hsa-miR-1972	CLIP-seq
MIRT1298159	hsa-miR-202	CLIP-seq
MIRT1298160	hsa-miR-2052	CLIP-seq
MIRT1298161	hsa-miR-206	CLIP-seq
MIRT1298162	hsa-miR-20a	CLIP-seq
MIRT1298163	hsa-miR-20b	CLIP-seq
MIRT1298124	hsa-miR-215	CLIP-seq
MIRT1298125	hsa-miR-216a	CLIP-seq
MIRT1298164	hsa-miR-2682	CLIP-seq
MIRT1298165	hsa-miR-3117-3p	CLIP-seq
MIRT1298126	hsa-miR-3121-3p	CLIP-seq
MIRT1298127	hsa-miR-3133	CLIP-seq
MIRT1298128	hsa-miR-3136-5p	CLIP-seq
MIRT1298166	hsa-miR-3140-5p	CLIP-seq
MIRT1298167	hsa-miR-3161	CLIP-seq
MIRT1298168	hsa-miR-3166	CLIP-seq
MIRT1298169	hsa-miR-3169	CLIP-seq
MIRT1298170	hsa-miR-3179	CLIP-seq
MIRT1298171	hsa-miR-3189-5p	CLIP-seq
MIRT1298172	hsa-miR-329	CLIP-seq
MIRT1298129	hsa-miR-340	CLIP-seq
MIRT1298173	hsa-miR-34c-3p	CLIP-seq
MIRT1298174	hsa-miR-3609	CLIP-seq
MIRT1298175	hsa-miR-3614-5p	CLIP-seq
MIRT1298176	hsa-miR-362-3p	CLIP-seq
MIRT1298130	hsa-miR-3660	CLIP-seq
MIRT1298177	hsa-miR-3661	CLIP-seq
MIRT1298178	hsa-miR-3673	CLIP-seq
MIRT1298179	hsa-miR-3925-3p	CLIP-seq
MIRT1298180	hsa-miR-3934	CLIP-seq
MIRT1298181	hsa-miR-4263	CLIP-seq
MIRT1298182	hsa-miR-4423-3p	CLIP-seq
MIRT1298183	hsa-miR-4436b-3p	CLIP-seq
MIRT1298131	hsa-miR-4439	CLIP-seq
MIRT1298184	hsa-miR-4458	CLIP-seq
MIRT1298132	hsa-miR-4483	CLIP-seq
MIRT1298185	hsa-miR-449c	CLIP-seq
MIRT1298186	hsa-miR-4500	CLIP-seq
MIRT1298187	hsa-miR-4509	CLIP-seq
MIRT1298133	hsa-miR-4513	CLIP-seq
MIRT1298134	hsa-miR-4526	CLIP-seq
MIRT1298188	hsa-miR-455-5p	CLIP-seq
MIRT1298135	hsa-miR-4633-3p	CLIP-seq
MIRT1298137	hsa-miR-4643	CLIP-seq
MIRT1298189	hsa-miR-4645-5p	CLIP-seq
MIRT1298190	hsa-miR-4673	CLIP-seq
MIRT1298191	hsa-miR-4678	CLIP-seq
MIRT1298192	hsa-miR-4685-5p	CLIP-seq
MIRT1298193	hsa-miR-4714-3p	CLIP-seq
MIRT1298194	hsa-miR-4717-5p	CLIP-seq
MIRT1298138	hsa-miR-4719	CLIP-seq
MIRT1298195	hsa-miR-4728-3p	CLIP-seq
MIRT1298196	hsa-miR-4744	CLIP-seq
MIRT1298197	hsa-miR-4758-3p	CLIP-seq
MIRT1298198	hsa-miR-4771	CLIP-seq
MIRT1298199	hsa-miR-4790-3p	CLIP-seq
MIRT1298200	hsa-miR-4795-3p	CLIP-seq
MIRT1298201	hsa-miR-4796-3p	CLIP-seq
MIRT1298202	hsa-miR-4799-5p	CLIP-seq
MIRT1298203	hsa-miR-485-3p	CLIP-seq
MIRT1298140	hsa-miR-502-5p	CLIP-seq
MIRT1298204	hsa-miR-519a	CLIP-seq
MIRT1298205	hsa-miR-519b-3p	CLIP-seq
MIRT1298206	hsa-miR-519c-3p	CLIP-seq
MIRT1298207	hsa-miR-519d	CLIP-seq
MIRT1298208	hsa-miR-548aa	CLIP-seq
MIRT1298209	hsa-miR-548ah	CLIP-seq
MIRT1298210	hsa-miR-576-5p	CLIP-seq
MIRT1298211	hsa-miR-606	CLIP-seq
MIRT1298212	hsa-miR-613	CLIP-seq
MIRT1298141	hsa-miR-619	CLIP-seq
MIRT1298213	hsa-miR-628-5p	CLIP-seq
MIRT1298214	hsa-miR-631	CLIP-seq
MIRT1298215	hsa-miR-636	CLIP-seq
MIRT1298216	hsa-miR-651	CLIP-seq
MIRT1298217	hsa-miR-664	CLIP-seq
MIRT1298218	hsa-miR-766	CLIP-seq
MIRT1298219	hsa-miR-888	CLIP-seq
MIRT1298220	hsa-miR-922	CLIP-seq
MIRT1298221	hsa-miR-93	CLIP-seq
MIRT1298222	hsa-miR-940	CLIP-seq
MIRT1298223	hsa-miR-98	CLIP-seq
MIRT1298128	hsa-miR-3136-5p	CLIP-seq
MIRT1298130	hsa-miR-3660	CLIP-seq
MIRT1298177	hsa-miR-3661	CLIP-seq
MIRT1298131	hsa-miR-4439	CLIP-seq
MIRT1298133	hsa-miR-4513	CLIP-seq
MIRT1298134	hsa-miR-4526	CLIP-seq
MIRT1298214	hsa-miR-631	CLIP-seq
MIRT1298128	hsa-miR-3136-5p	CLIP-seq
MIRT1298130	hsa-miR-3660	CLIP-seq
MIRT1298131	hsa-miR-4439	CLIP-seq
MIRT1298133	hsa-miR-4513	CLIP-seq
MIRT1298134	hsa-miR-4526	CLIP-seq
MIRT1298142	hsa-let-7a	CLIP-seq
MIRT1298143	hsa-let-7b	CLIP-seq
MIRT1298144	hsa-let-7c	CLIP-seq
MIRT1298145	hsa-let-7d	CLIP-seq
MIRT1298146	hsa-let-7e	CLIP-seq
MIRT1298147	hsa-let-7f	CLIP-seq
MIRT1298148	hsa-let-7g	CLIP-seq
MIRT1298149	hsa-let-7i	CLIP-seq
MIRT1298151	hsa-miR-106a	CLIP-seq
MIRT1298152	hsa-miR-106b	CLIP-seq
MIRT1298156	hsa-miR-1305	CLIP-seq
MIRT2088661	hsa-miR-150	CLIP-seq
MIRT1298157	hsa-miR-17	CLIP-seq
MIRT1298159	hsa-miR-202	CLIP-seq
MIRT1298162	hsa-miR-20a	CLIP-seq
MIRT1298163	hsa-miR-20b	CLIP-seq
MIRT2088662	hsa-miR-302a	CLIP-seq
MIRT2088663	hsa-miR-302b	CLIP-seq
MIRT2088664	hsa-miR-302c	CLIP-seq
MIRT2088665	hsa-miR-302d	CLIP-seq
MIRT2088666	hsa-miR-302e	CLIP-seq
MIRT1298165	hsa-miR-3117-3p	CLIP-seq
MIRT1298128	hsa-miR-3136-5p	CLIP-seq
MIRT1298168	hsa-miR-3166	CLIP-seq
MIRT2088667	hsa-miR-3199	CLIP-seq
MIRT1298173	hsa-miR-34c-3p	CLIP-seq
MIRT1298174	hsa-miR-3609	CLIP-seq
MIRT1298175	hsa-miR-3614-5p	CLIP-seq
MIRT1298130	hsa-miR-3660	CLIP-seq
MIRT2088668	hsa-miR-3667-5p	CLIP-seq
MIRT2088669	hsa-miR-372	CLIP-seq
MIRT2088670	hsa-miR-373	CLIP-seq
MIRT1298179	hsa-miR-3925-3p	CLIP-seq
MIRT1298180	hsa-miR-3934	CLIP-seq
MIRT1298181	hsa-miR-4263	CLIP-seq
MIRT1298131	hsa-miR-4439	CLIP-seq
MIRT1298184	hsa-miR-4458	CLIP-seq
MIRT1298186	hsa-miR-4500	CLIP-seq
MIRT1298187	hsa-miR-4509	CLIP-seq
MIRT1298133	hsa-miR-4513	CLIP-seq
MIRT1298134	hsa-miR-4526	CLIP-seq
MIRT1298191	hsa-miR-4678	CLIP-seq
MIRT1298192	hsa-miR-4685-5p	CLIP-seq
MIRT2088671	hsa-miR-4731-5p	CLIP-seq
MIRT1298196	hsa-miR-4744	CLIP-seq
MIRT1298198	hsa-miR-4771	CLIP-seq
MIRT1298200	hsa-miR-4795-3p	CLIP-seq
MIRT1298201	hsa-miR-4796-3p	CLIP-seq
MIRT1298202	hsa-miR-4799-5p	CLIP-seq
MIRT2088672	hsa-miR-512-3p	CLIP-seq
MIRT1298204	hsa-miR-519a	CLIP-seq
MIRT1298205	hsa-miR-519b-3p	CLIP-seq
MIRT1298206	hsa-miR-519c-3p	CLIP-seq
MIRT1298207	hsa-miR-519d	CLIP-seq
MIRT2088673	hsa-miR-520a-3p	CLIP-seq
MIRT2088674	hsa-miR-520b	CLIP-seq
MIRT2088675	hsa-miR-520c-3p	CLIP-seq
MIRT2088676	hsa-miR-520d-3p	CLIP-seq
MIRT2088677	hsa-miR-520e	CLIP-seq
MIRT2088678	hsa-miR-520g	CLIP-seq
MIRT2088679	hsa-miR-520h	CLIP-seq
MIRT1298209	hsa-miR-548ah	CLIP-seq
MIRT2088680	hsa-miR-552	CLIP-seq
MIRT1298210	hsa-miR-576-5p	CLIP-seq
MIRT1298216	hsa-miR-651	CLIP-seq
MIRT1298218	hsa-miR-766	CLIP-seq
MIRT1298221	hsa-miR-93	CLIP-seq
MIRT1298223	hsa-miR-98	CLIP-seq
MIRT1298150	hsa-miR-1	CLIP-seq
MIRT1298151	hsa-miR-106a	CLIP-seq
MIRT1298152	hsa-miR-106b	CLIP-seq
MIRT1298157	hsa-miR-17	CLIP-seq
MIRT1298161	hsa-miR-206	CLIP-seq
MIRT1298162	hsa-miR-20a	CLIP-seq
MIRT1298163	hsa-miR-20b	CLIP-seq
MIRT1298128	hsa-miR-3136-5p	CLIP-seq
MIRT1298168	hsa-miR-3166	CLIP-seq
MIRT1298170	hsa-miR-3179	CLIP-seq
MIRT1298173	hsa-miR-34c-3p	CLIP-seq
MIRT1298174	hsa-miR-3609	CLIP-seq
MIRT1298130	hsa-miR-3660	CLIP-seq
MIRT1298178	hsa-miR-3673	CLIP-seq
MIRT1298180	hsa-miR-3934	CLIP-seq
MIRT1298181	hsa-miR-4263	CLIP-seq
MIRT1298131	hsa-miR-4439	CLIP-seq
MIRT1298187	hsa-miR-4509	CLIP-seq
MIRT1298133	hsa-miR-4513	CLIP-seq
MIRT1298134	hsa-miR-4526	CLIP-seq
MIRT2088671	hsa-miR-4731-5p	CLIP-seq
MIRT1298196	hsa-miR-4744	CLIP-seq
MIRT1298198	hsa-miR-4771	CLIP-seq
MIRT1298201	hsa-miR-4796-3p	CLIP-seq
MIRT1298202	hsa-miR-4799-5p	CLIP-seq
MIRT1298204	hsa-miR-519a	CLIP-seq
MIRT1298205	hsa-miR-519b-3p	CLIP-seq
MIRT1298206	hsa-miR-519c-3p	CLIP-seq
MIRT1298207	hsa-miR-519d	CLIP-seq
MIRT1298209	hsa-miR-548ah	CLIP-seq
MIRT2088680	hsa-miR-552	CLIP-seq
MIRT1298210	hsa-miR-576-5p	CLIP-seq
MIRT1298212	hsa-miR-613	CLIP-seq
MIRT1298221	hsa-miR-93	CLIP-seq
MIRT2393594	hsa-miR-141	CLIP-seq
MIRT2393595	hsa-miR-200a	CLIP-seq
MIRT1298128	hsa-miR-3136-5p	CLIP-seq
MIRT1298130	hsa-miR-3660	CLIP-seq
MIRT2393596	hsa-miR-371b-5p	CLIP-seq
MIRT1298131	hsa-miR-4439	CLIP-seq
MIRT1298133	hsa-miR-4513	CLIP-seq
MIRT1298134	hsa-miR-4526	CLIP-seq
MIRT1298219	hsa-miR-888	CLIP-seq
MIRT2393594	hsa-miR-141	CLIP-seq
MIRT2393595	hsa-miR-200a	CLIP-seq
MIRT2393596	hsa-miR-371b-5p	CLIP-seq
MIRT1298219	hsa-miR-888	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005515	Function	Protein binding	IPI	24981860, 33961781
GO:0005694	Component	Chromosome	IEA
GO:0005829	Component	Cytosol	IDA
GO:0005829	Component	Cytosol	TAS
GO:0005886	Component	Plasma membrane	IDA
GO:0006325	Process	Chromatin organization	IEA

Other IDs

• MIM: 617997
• HGNC: 30457
• e!Ensembl: ENSG00000166965

Protein

• UniProt ID: A6NED2
• Protein name: RCC1 domain-containing protein 1
• Protein function: Plays a role in transcriptional repression of satellite repeats, possibly by regulating H3K36 methylation levels in centromeric regions together with KDM8 (PubMed:24981860). Possibly together with KDM8, is involved in proper mitotic spindle orga
• PDB: 6F4R, 6F4S, 6F4T
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF00415	RCC1	176 → 225	Regulator of chromosome condensation (RCC1) repeat	Repeat
  PF00415	RCC1	318 → 369	Regulator of chromosome condensation (RCC1) repeat	Repeat

• Sequence:

  MAEERPGAWFGFGFCGFGQELGSGRGRQVHSPSPLRAGVDICRVSASWSYTAFVTRGGRL
  ELSGSASGAAGRCKDAWASEGLLAVLRAGPGPEALLQVWAAESALRGEPLWAQNVVPEAE
  GEDDPAGEAQAGRLPLLPCARAYVSPRAPFYRPLAPELRARQLELGAEHALLLDAAGQVF
  SWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESG
  QLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGS
  DAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVT
  CGPWNTYVYAVEKGKS

• Sequence length: 376