Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
9056
Gene name Gene Name - the full gene name approved by the HGNC.
Solute carrier family 7 member 7
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
SLC7A7
Synonyms (NCBI Gene) Gene synonyms aliases
LAT3, LPI, MOP-2, Y+LAT1, y+LAT-1
Disease Acronyms (UniProt) Disease acronyms from UniProt database
LPI
Chromosome Chromosome number
14
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
14q11.2
Summary Summary of gene provided in NCBI Entrez Gene.
The protein encoded by this gene is the light subunit of a cationic amino acid transporter. This sodium-independent transporter is formed when the light subunit encoded by this gene dimerizes with the heavy subunit transporter protein SLC3A2. This transpo
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs11568437 G>A,C,T Conflicting-interpretations-of-pathogenicity, uncertain-significance Coding sequence variant, missense variant
rs72552272 A>C Pathogenic Coding sequence variant, missense variant
rs121908676 T>G Pathogenic Missense variant, initiator codon variant
rs121908677 C>A Pathogenic Missense variant, coding sequence variant
rs121908678 G>A,T Pathogenic Stop gained, coding sequence variant, synonymous variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT531292 hsa-miR-5586-5p PAR-CLIP 22012620
MIRT531291 hsa-miR-3065-3p PAR-CLIP 22012620
MIRT531290 hsa-miR-4530 PAR-CLIP 22012620
MIRT531289 hsa-miR-338-3p PAR-CLIP 22012620
MIRT531288 hsa-miR-4679 PAR-CLIP 22012620
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000821 Process Regulation of arginine metabolic process IBA 21873635
GO:0003333 Process Amino acid transmembrane transport IBA 21873635
GO:0005886 Component Plasma membrane TAS
GO:0005887 Component Integral component of plasma membrane TAS 9829974
GO:0006865 Process Amino acid transport TAS
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
603593 11065 ENSG00000155465
Protein
UniProt ID Q9UM01
Protein name Y+L amino acid transporter 1 (Monocyte amino acid permease 2) (MOP-2) (Solute carrier family 7 member 7) (y(+)L-type amino acid transporter 1) (Y+LAT1) (y+LAT-1)
Protein function Heterodimer with SLC3A2, that functions as an antiporter which operates as an efflux route by exporting cationic amino acids from inside the cells in exchange with neutral amino acids plus sodium ions and may participate in nitric oxide synthesi
PDB 8XXI , 8XYJ , 8YLP
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF13520 AA_permease_2 37 461 Amino acid permease Family
Tissue specificity TISSUE SPECIFICITY: Highest expression in kidney and peripheral blood leukocytes (PubMed:9829974). Weaker expression is observed in lung, heart, placenta, spleen, testis and small intestine (PubMed:9829974). Expressed in normal fibroblasts and those from
Sequence
Sequence length 511
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Protein digestion and absorption   Basigin interactions
Amino acid transport across the plasma membrane
Defective SLC7A7 causes lysinuric protein intolerance (LPI)
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Anemia Anemia rs118204044, rs118204045, rs118204046, rs121918330, rs869320719, rs869312029, rs121918332, rs869320724, rs767094129, rs786205058, rs786205059, rs137853119, rs137853120, rs137853121, rs1384933966
View all (89 more)
Breast cancer Malignant neoplasm of breast rs587776547, rs1137887, rs137853007, rs587776650, rs80359351, rs80359714, rs121917783, rs104886456, rs121964878, rs80359874, rs80357868, rs80357508, rs387906843, rs80357569, rs80358158
View all (309 more)
Complement component deficiency Complement deficiency disease rs387906509, rs1467298230, rs1022194067, rs774370086, rs121964922, rs372345940, rs121913052, rs121913053, rs460897, rs121913054, rs121913056, rs121913058, rs796052138, rs41286844, rs121909592
View all (29 more)
Congenital heart defects Congenital Heart Defects rs267607101, rs121434422, rs387906498, rs397509416, rs587777371, rs587777372, rs587777374, rs367537998, rs797044882, rs886041730, rs768027510, rs1064793873, rs1555447012, rs1554263268, rs1554263321
View all (13 more)
Unknown
Disease term Disease name Evidence References Source
Cirrhosis Cirrhosis ClinVar
Pancreatitis Pancreatitis ClinVar
Diabetes Diabetes GWAS
Oligodendroglioma Oligodendroglioma GWAS
Associations from Text Mining
Disease Name Relationship Type References
Acidosis Associate 35964089
Anemia Associate 22876067
Arginine Glycine Amidinotransferase Deficiency Associate 11544277
Brain Diseases Associate 27567650
Carcinoma Basal Cell Associate 29938775
Coproporphyria Hereditary Associate 35669728
Drug Related Side Effects and Adverse Reactions Associate 23545897
Dykes Markes Harper syndrome Associate 31705628
Esophageal Squamous Cell Carcinoma Associate 37071001
Failure to Thrive Associate 31705628