Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Other IDs Protein Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	90324
Gene name Gene Name - the full gene name approved by the HGNC.	Coiled-coil domain containing 97
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	CCDC97
Synonyms (NCBI Gene) Gene synonyms aliases	-
Chromosome Chromosome number	19
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	19q13.2

Show/Hide all(309)

miRTarBase ID	miRNA	Experiments	Reference
MIRT051643	hsa-let-7e-5p	CLASH	23622248
MIRT042047	hsa-miR-484	CLASH	23622248
MIRT870690	hsa-miR-1207-3p	CLIP-seq
MIRT870691	hsa-miR-122	CLIP-seq
MIRT870692	hsa-miR-124	CLIP-seq
MIRT870693	hsa-miR-1245b-5p	CLIP-seq
MIRT870694	hsa-miR-1254	CLIP-seq
MIRT870695	hsa-miR-1291	CLIP-seq
MIRT870696	hsa-miR-1324	CLIP-seq
MIRT870697	hsa-miR-136	CLIP-seq
MIRT870698	hsa-miR-143	CLIP-seq
MIRT870699	hsa-miR-1827	CLIP-seq
MIRT870700	hsa-miR-185	CLIP-seq
MIRT870701	hsa-miR-1914	CLIP-seq
MIRT870702	hsa-miR-2110	CLIP-seq
MIRT870703	hsa-miR-22	CLIP-seq
MIRT870704	hsa-miR-30a	CLIP-seq
MIRT870705	hsa-miR-30b	CLIP-seq
MIRT870706	hsa-miR-30c	CLIP-seq
MIRT870707	hsa-miR-30d	CLIP-seq
MIRT870708	hsa-miR-30e	CLIP-seq
MIRT870709	hsa-miR-3116	CLIP-seq
MIRT870710	hsa-miR-3120-5p	CLIP-seq
MIRT870711	hsa-miR-3123	CLIP-seq
MIRT870712	hsa-miR-3125	CLIP-seq
MIRT870713	hsa-miR-3126-5p	CLIP-seq
MIRT870714	hsa-miR-3142	CLIP-seq
MIRT870715	hsa-miR-3147	CLIP-seq
MIRT870716	hsa-miR-3150a-3p	CLIP-seq
MIRT870717	hsa-miR-3173-5p	CLIP-seq
MIRT870718	hsa-miR-3175	CLIP-seq
MIRT870719	hsa-miR-3202	CLIP-seq
MIRT870720	hsa-miR-3661	CLIP-seq
MIRT870721	hsa-miR-3675-5p	CLIP-seq
MIRT870722	hsa-miR-3714	CLIP-seq
MIRT870723	hsa-miR-3910	CLIP-seq
MIRT870724	hsa-miR-3916	CLIP-seq
MIRT870725	hsa-miR-3925-5p	CLIP-seq
MIRT870726	hsa-miR-3929	CLIP-seq
MIRT870727	hsa-miR-4260	CLIP-seq
MIRT870728	hsa-miR-4306	CLIP-seq
MIRT870729	hsa-miR-4311	CLIP-seq
MIRT870730	hsa-miR-4312	CLIP-seq
MIRT870731	hsa-miR-4419a	CLIP-seq
MIRT870732	hsa-miR-4419b	CLIP-seq
MIRT870733	hsa-miR-4420	CLIP-seq
MIRT870734	hsa-miR-4421	CLIP-seq
MIRT870735	hsa-miR-4425	CLIP-seq
MIRT870736	hsa-miR-4450	CLIP-seq
MIRT870737	hsa-miR-4468	CLIP-seq
MIRT870738	hsa-miR-4476	CLIP-seq
MIRT870739	hsa-miR-4478	CLIP-seq
MIRT870740	hsa-miR-4510	CLIP-seq
MIRT870741	hsa-miR-4644	CLIP-seq
MIRT870742	hsa-miR-4650-5p	CLIP-seq
MIRT870743	hsa-miR-4690-5p	CLIP-seq
MIRT870744	hsa-miR-4695-3p	CLIP-seq
MIRT870745	hsa-miR-4716-3p	CLIP-seq
MIRT870746	hsa-miR-4722-5p	CLIP-seq
MIRT870747	hsa-miR-4723-5p	CLIP-seq
MIRT870748	hsa-miR-4746-3p	CLIP-seq
MIRT870749	hsa-miR-4768-3p	CLIP-seq
MIRT870750	hsa-miR-4770	CLIP-seq
MIRT870751	hsa-miR-486-3p	CLIP-seq
MIRT870752	hsa-miR-506	CLIP-seq
MIRT870753	hsa-miR-579	CLIP-seq
MIRT870754	hsa-miR-631	CLIP-seq
MIRT870755	hsa-miR-658	CLIP-seq
MIRT870756	hsa-miR-661	CLIP-seq
MIRT870757	hsa-miR-711	CLIP-seq
MIRT870758	hsa-miR-933	CLIP-seq
MIRT870759	hsa-miR-939	CLIP-seq
MIRT870760	hsa-miR-940	CLIP-seq
MIRT1958517	hsa-miR-1207-5p	CLIP-seq
MIRT870691	hsa-miR-122	CLIP-seq
MIRT870693	hsa-miR-1245b-5p	CLIP-seq
MIRT1958518	hsa-miR-1275	CLIP-seq
MIRT870695	hsa-miR-1291	CLIP-seq
MIRT1958519	hsa-miR-1304	CLIP-seq
MIRT870696	hsa-miR-1324	CLIP-seq
MIRT1958520	hsa-miR-140-5p	CLIP-seq
MIRT870698	hsa-miR-143	CLIP-seq
MIRT1958521	hsa-miR-147	CLIP-seq
MIRT870699	hsa-miR-1827	CLIP-seq
MIRT870700	hsa-miR-185	CLIP-seq
MIRT870701	hsa-miR-1914	CLIP-seq
MIRT1958522	hsa-miR-205	CLIP-seq
MIRT1958523	hsa-miR-2052	CLIP-seq
MIRT870702	hsa-miR-2110	CLIP-seq
MIRT1958524	hsa-miR-2467-5p	CLIP-seq
MIRT1958525	hsa-miR-296-5p	CLIP-seq
MIRT1958526	hsa-miR-3064-5p	CLIP-seq
MIRT1958527	hsa-miR-3121-5p	CLIP-seq
MIRT1958528	hsa-miR-3124-3p	CLIP-seq
MIRT870713	hsa-miR-3126-5p	CLIP-seq
MIRT870714	hsa-miR-3142	CLIP-seq
MIRT870716	hsa-miR-3150a-3p	CLIP-seq
MIRT1958529	hsa-miR-3155	CLIP-seq
MIRT1958530	hsa-miR-3155b	CLIP-seq
MIRT1958531	hsa-miR-3173-3p	CLIP-seq
MIRT870717	hsa-miR-3173-5p	CLIP-seq
MIRT870718	hsa-miR-3175	CLIP-seq
MIRT1958532	hsa-miR-3180-5p	CLIP-seq
MIRT1958533	hsa-miR-3187-3p	CLIP-seq
MIRT1958534	hsa-miR-3189-3p	CLIP-seq
MIRT870719	hsa-miR-3202	CLIP-seq
MIRT1958535	hsa-miR-346	CLIP-seq
MIRT1958536	hsa-miR-3545-5p	CLIP-seq
MIRT1958537	hsa-miR-3612	CLIP-seq
MIRT1958538	hsa-miR-3622a-3p	CLIP-seq
MIRT1958539	hsa-miR-3622b-3p	CLIP-seq
MIRT1958540	hsa-miR-3659	CLIP-seq
MIRT1958541	hsa-miR-3921	CLIP-seq
MIRT870727	hsa-miR-4260	CLIP-seq
MIRT1958542	hsa-miR-4283	CLIP-seq
MIRT1958543	hsa-miR-4288	CLIP-seq
MIRT870728	hsa-miR-4306	CLIP-seq
MIRT1958544	hsa-miR-4324	CLIP-seq
MIRT1958545	hsa-miR-4328	CLIP-seq
MIRT870731	hsa-miR-4419a	CLIP-seq
MIRT1958546	hsa-miR-4435	CLIP-seq
MIRT1958547	hsa-miR-4447	CLIP-seq
MIRT1958548	hsa-miR-4472	CLIP-seq
MIRT1958549	hsa-miR-4480	CLIP-seq
MIRT870740	hsa-miR-4510	CLIP-seq
MIRT1958550	hsa-miR-4525	CLIP-seq
MIRT870741	hsa-miR-4644	CLIP-seq
MIRT1958551	hsa-miR-4645-5p	CLIP-seq
MIRT870742	hsa-miR-4650-5p	CLIP-seq
MIRT1958552	hsa-miR-4653-5p	CLIP-seq
MIRT1958553	hsa-miR-4658	CLIP-seq
MIRT1958554	hsa-miR-4665-5p	CLIP-seq
MIRT1958555	hsa-miR-4668-5p	CLIP-seq
MIRT1958556	hsa-miR-4673	CLIP-seq
MIRT1958557	hsa-miR-4682	CLIP-seq
MIRT1958558	hsa-miR-4695-5p	CLIP-seq
MIRT1958559	hsa-miR-4701-5p	CLIP-seq
MIRT1958560	hsa-miR-4711-3p	CLIP-seq
MIRT870745	hsa-miR-4716-3p	CLIP-seq
MIRT870746	hsa-miR-4722-5p	CLIP-seq
MIRT870747	hsa-miR-4723-5p	CLIP-seq
MIRT1958561	hsa-miR-4731-5p	CLIP-seq
MIRT1958562	hsa-miR-4747-5p	CLIP-seq
MIRT1958563	hsa-miR-4763-3p	CLIP-seq
MIRT870749	hsa-miR-4768-3p	CLIP-seq
MIRT870750	hsa-miR-4770	CLIP-seq
MIRT1958564	hsa-miR-4794	CLIP-seq
MIRT870751	hsa-miR-486-3p	CLIP-seq
MIRT1958565	hsa-miR-5096	CLIP-seq
MIRT1958566	hsa-miR-510	CLIP-seq
MIRT1958567	hsa-miR-512-5p	CLIP-seq
MIRT1958568	hsa-miR-539	CLIP-seq
MIRT1958569	hsa-miR-548s	CLIP-seq
MIRT1958570	hsa-miR-574-5p	CLIP-seq
MIRT870753	hsa-miR-579	CLIP-seq
MIRT1958571	hsa-miR-588	CLIP-seq
MIRT1958572	hsa-miR-625	CLIP-seq
MIRT1958573	hsa-miR-632	CLIP-seq
MIRT1958574	hsa-miR-635	CLIP-seq
MIRT1958575	hsa-miR-637	CLIP-seq
MIRT1958576	hsa-miR-645	CLIP-seq
MIRT1958577	hsa-miR-650	CLIP-seq
MIRT1958578	hsa-miR-758	CLIP-seq
MIRT1958579	hsa-miR-760	CLIP-seq
MIRT870759	hsa-miR-939	CLIP-seq
MIRT870760	hsa-miR-940	CLIP-seq
MIRT870691	hsa-miR-122	CLIP-seq
MIRT2195326	hsa-miR-1226	CLIP-seq
MIRT870694	hsa-miR-1254	CLIP-seq
MIRT2195327	hsa-miR-1273g	CLIP-seq
MIRT1958519	hsa-miR-1304	CLIP-seq
MIRT870696	hsa-miR-1324	CLIP-seq
MIRT2195328	hsa-miR-138	CLIP-seq
MIRT1958520	hsa-miR-140-5p	CLIP-seq
MIRT870698	hsa-miR-143	CLIP-seq
MIRT2195329	hsa-miR-146b-3p	CLIP-seq
MIRT1958521	hsa-miR-147	CLIP-seq
MIRT2195330	hsa-miR-149	CLIP-seq
MIRT2195331	hsa-miR-1538	CLIP-seq
MIRT2195332	hsa-miR-15a	CLIP-seq
MIRT2195333	hsa-miR-15b	CLIP-seq
MIRT2195334	hsa-miR-16	CLIP-seq
MIRT870699	hsa-miR-1827	CLIP-seq
MIRT870700	hsa-miR-185	CLIP-seq
MIRT870701	hsa-miR-1914	CLIP-seq
MIRT2195335	hsa-miR-195	CLIP-seq
MIRT870702	hsa-miR-2110	CLIP-seq
MIRT2195336	hsa-miR-2467-3p	CLIP-seq
MIRT2195337	hsa-miR-2964a-5p	CLIP-seq
MIRT1958526	hsa-miR-3064-5p	CLIP-seq
MIRT870704	hsa-miR-30a	CLIP-seq
MIRT870705	hsa-miR-30b	CLIP-seq
MIRT870706	hsa-miR-30c	CLIP-seq
MIRT870707	hsa-miR-30d	CLIP-seq
MIRT870708	hsa-miR-30e	CLIP-seq
MIRT870709	hsa-miR-3116	CLIP-seq
MIRT870711	hsa-miR-3123	CLIP-seq
MIRT2195338	hsa-miR-3126-3p	CLIP-seq
MIRT870713	hsa-miR-3126-5p	CLIP-seq
MIRT870715	hsa-miR-3147	CLIP-seq
MIRT870716	hsa-miR-3150a-3p	CLIP-seq
MIRT2195339	hsa-miR-3151	CLIP-seq
MIRT870717	hsa-miR-3173-5p	CLIP-seq
MIRT870718	hsa-miR-3175	CLIP-seq
MIRT2195340	hsa-miR-3188	CLIP-seq
MIRT1958537	hsa-miR-3612	CLIP-seq
MIRT1958538	hsa-miR-3622a-3p	CLIP-seq
MIRT1958539	hsa-miR-3622b-3p	CLIP-seq
MIRT870725	hsa-miR-3925-5p	CLIP-seq
MIRT2195341	hsa-miR-3937	CLIP-seq
MIRT2195342	hsa-miR-424	CLIP-seq
MIRT870727	hsa-miR-4260	CLIP-seq
MIRT870728	hsa-miR-4306	CLIP-seq
MIRT1958544	hsa-miR-4324	CLIP-seq
MIRT870731	hsa-miR-4419a	CLIP-seq
MIRT2195343	hsa-miR-4456	CLIP-seq
MIRT2195344	hsa-miR-4464	CLIP-seq
MIRT870738	hsa-miR-4476	CLIP-seq
MIRT1958549	hsa-miR-4480	CLIP-seq
MIRT2195345	hsa-miR-4492	CLIP-seq
MIRT2195346	hsa-miR-4498	CLIP-seq
MIRT870740	hsa-miR-4510	CLIP-seq
MIRT2195347	hsa-miR-4524	CLIP-seq
MIRT2195348	hsa-miR-4529-5p	CLIP-seq
MIRT870741	hsa-miR-4644	CLIP-seq
MIRT870746	hsa-miR-4722-5p	CLIP-seq
MIRT1958561	hsa-miR-4731-5p	CLIP-seq
MIRT2195349	hsa-miR-4733-3p	CLIP-seq
MIRT2195350	hsa-miR-4745-3p	CLIP-seq
MIRT2195351	hsa-miR-4747-3p	CLIP-seq
MIRT2195352	hsa-miR-4748	CLIP-seq
MIRT870749	hsa-miR-4768-3p	CLIP-seq
MIRT870750	hsa-miR-4770	CLIP-seq
MIRT2195353	hsa-miR-4783-3p	CLIP-seq
MIRT1958564	hsa-miR-4794	CLIP-seq
MIRT870751	hsa-miR-486-3p	CLIP-seq
MIRT2195354	hsa-miR-497	CLIP-seq
MIRT2195355	hsa-miR-503	CLIP-seq
MIRT1958568	hsa-miR-539	CLIP-seq
MIRT2195356	hsa-miR-541	CLIP-seq
MIRT2195357	hsa-miR-646	CLIP-seq
MIRT1958577	hsa-miR-650	CLIP-seq
MIRT2195358	hsa-miR-654-5p	CLIP-seq
MIRT1958578	hsa-miR-758	CLIP-seq
MIRT2195359	hsa-miR-762	CLIP-seq
MIRT2195360	hsa-miR-874	CLIP-seq
MIRT870758	hsa-miR-933	CLIP-seq
MIRT870759	hsa-miR-939	CLIP-seq
MIRT870760	hsa-miR-940	CLIP-seq
MIRT1958517	hsa-miR-1207-5p	CLIP-seq
MIRT870698	hsa-miR-143	CLIP-seq
MIRT870699	hsa-miR-1827	CLIP-seq
MIRT870700	hsa-miR-185	CLIP-seq
MIRT2195336	hsa-miR-2467-3p	CLIP-seq
MIRT1958542	hsa-miR-4283	CLIP-seq
MIRT870728	hsa-miR-4306	CLIP-seq
MIRT870741	hsa-miR-4644	CLIP-seq
MIRT2385688	hsa-miR-4656	CLIP-seq
MIRT870746	hsa-miR-4722-5p	CLIP-seq
MIRT1958561	hsa-miR-4731-5p	CLIP-seq
MIRT1958563	hsa-miR-4763-3p	CLIP-seq
MIRT870749	hsa-miR-4768-3p	CLIP-seq
MIRT870750	hsa-miR-4770	CLIP-seq
MIRT1958568	hsa-miR-539	CLIP-seq
MIRT870760	hsa-miR-940	CLIP-seq
MIRT2498614	hsa-miR-1233	CLIP-seq
MIRT2498615	hsa-miR-1258	CLIP-seq
MIRT2498616	hsa-miR-129-3p	CLIP-seq
MIRT2498617	hsa-miR-1295	CLIP-seq
MIRT870696	hsa-miR-1324	CLIP-seq
MIRT2498618	hsa-miR-1343	CLIP-seq
MIRT1958520	hsa-miR-140-5p	CLIP-seq
MIRT870716	hsa-miR-3150a-3p	CLIP-seq
MIRT870718	hsa-miR-3175	CLIP-seq
MIRT1958538	hsa-miR-3622a-3p	CLIP-seq
MIRT1958539	hsa-miR-3622b-3p	CLIP-seq
MIRT1958544	hsa-miR-4324	CLIP-seq
MIRT1958549	hsa-miR-4480	CLIP-seq
MIRT2498619	hsa-miR-4667-5p	CLIP-seq
MIRT2498620	hsa-miR-4700-5p	CLIP-seq
MIRT2498621	hsa-miR-4707-3p	CLIP-seq
MIRT2195351	hsa-miR-4747-3p	CLIP-seq
MIRT2498622	hsa-miR-640	CLIP-seq
MIRT870756	hsa-miR-661	CLIP-seq
MIRT870759	hsa-miR-939	CLIP-seq
MIRT2677516	hsa-miR-1224-5p	CLIP-seq
MIRT2498614	hsa-miR-1233	CLIP-seq
MIRT2677517	hsa-miR-1247	CLIP-seq
MIRT2498615	hsa-miR-1258	CLIP-seq
MIRT2498616	hsa-miR-129-3p	CLIP-seq
MIRT2498617	hsa-miR-1295	CLIP-seq
MIRT2498618	hsa-miR-1343	CLIP-seq
MIRT870716	hsa-miR-3150a-3p	CLIP-seq
MIRT870718	hsa-miR-3175	CLIP-seq
MIRT2677518	hsa-miR-371-5p	CLIP-seq
MIRT2677519	hsa-miR-371b-5p	CLIP-seq
MIRT2677520	hsa-miR-4649-3p	CLIP-seq
MIRT2498619	hsa-miR-4667-5p	CLIP-seq
MIRT2498620	hsa-miR-4700-5p	CLIP-seq
MIRT2498621	hsa-miR-4707-3p	CLIP-seq
MIRT2677521	hsa-miR-4725-5p	CLIP-seq
MIRT2195351	hsa-miR-4747-3p	CLIP-seq
MIRT2677522	hsa-miR-4751	CLIP-seq
MIRT2677523	hsa-miR-504	CLIP-seq
MIRT2677524	hsa-miR-513c	CLIP-seq
MIRT2677525	hsa-miR-514b-5p	CLIP-seq
MIRT2498622	hsa-miR-640	CLIP-seq
MIRT870756	hsa-miR-661	CLIP-seq
MIRT870759	hsa-miR-939	CLIP-seq

MIM	HGNC	e!Ensembl
HGNC	N/A	HGNC

Protein

UniProt ID

Q96F63

Protein name

Coiled-coil domain-containing protein 97

Protein function

May play a role pre-mRNA splicing through the association with the splicing factor SF3B complex which is involved in branch-site recognition.

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF09747	DUF2052	156 → 330	Coiled-coil domain containing protein (DUF2052)	Coiled-coil

Sequence

MEAVATATAAKEPDKGCIEPGPGHWGELSRTPVPSKPQDKVEAAEATPVALDSDTSGAEN
AAVSAMLHAVAASRLPVCSQQQGEPDLTEHEKVAILAQLYHEKPLVFLERFRTGLREEHL
ACFGHVRGDHRADFYCAEVARQGTARPRTLRTRLRNRRYAALRELIQGGEYFSDEQMRFR
APLLYEQYIGQYLTQEELSARTPTHQPPKPGSPGRPACPLSNLLLQSYEERELQQRLLQQ
QEEEEACLEEEEEEEDSDEEDQRSGKDSEAWVPDSEERLILREEFTSRMHQRFLDGKDGD
FDYSTVDDNPDFDNLDIVARDEEERYFDEEEPEDAPSPELDGD

Sequence length

343

Interactions

View interactions

Show/Hide Causal Diseases (1)

Disease term	Disease name	dbSNP ID	References
Causal
Coronary artery disease	Coronary Artery Disease	rs137852988, rs121918313, rs121918529, rs121918531, rs137852340, rs1555800701, rs1215189537	29212778

Show/Hide Unknown Diseases (2)

Disease term	Disease name	Source
Unknown
Myocardial Infarction	Myocardial Infarction	GWAS
Coronary Heart Disease	Coronary Heart Disease	GWAS

Show/Hide Text Mining Associations (9)

Disease Name	Relationship Type	References
Associations from Text Mining
Adenocarcinoma	Associate	18281501
Coronary Artery Disease	Associate	27386823
Emphysema	Associate	18670143, 23734748
Fibrosis	Associate	24142982
Glomerulonephritis IGA	Associate	19258388
Lymphoma Mantle Cell	Associate	33648463
Neoplasms	Associate	33648463
Pulmonary Disease Chronic Obstructive	Associate	16780585, 18670143, 23267696
Temporomandibular Joint Disorders	Associate	22000099

CCDC97 (coiled-coil domain containing 97)