Gene Gene information from NCBI Gene database.
Entrez ID 8892
Gene name Eukaryotic translation initiation factor 2B subunit beta
Gene symbol EIF2B2
Synonyms (NCBI Gene)
EIF-2BbetaEIF2BEIF2BbetaVWM2
Chromosome 14
Chromosome location 14q24.3
Summary This gene encodes the beta subunit of eukaryotic initiation factor-2B (EIF2B). EIF2B is involved in protein synthesis and exchanges GDP and GTP for its activation and deactivation. [provided by RefSeq, Aug 2011]
SNPs SNP information provided by dbSNP.
14
SNP ID Visualize variation Clinical significance Consequence
rs104894425 A>G Pathogenic Missense variant, coding sequence variant
rs104894426 T>A Pathogenic, likely-pathogenic Missense variant, coding sequence variant
rs104894427 C>T Pathogenic Stop gained, coding sequence variant
rs104894428 C>A,T Pathogenic Missense variant, coding sequence variant
rs113994012 G>C,T Pathogenic-likely-pathogenic, likely-pathogenic Missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
209
miRTarBase ID miRNA Experiments Reference
MIRT020527 hsa-miR-155-5p Proteomics 18668040
MIRT031428 hsa-miR-16-5p Proteomics 18668040
MIRT049061 hsa-miR-92a-3p CLASH 23622248
MIRT040533 hsa-miR-92b-3p CLASH 23622248
MIRT037833 hsa-miR-455-3p CLASH 23622248
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
33
GO ID Ontology Definition Evidence Reference
GO:0001541 Process Ovarian follicle development IMP 15507143
GO:0002183 Process Cytoplasmic translational initiation IDA 27023709
GO:0003743 Function Translation initiation factor activity IDA 16289705
GO:0003743 Function Translation initiation factor activity IEA
GO:0005085 Function Guanyl-nucleotide exchange factor activity IBA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
606454 3258 ENSG00000119718
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P49770
Protein name Translation initiation factor eIF2B subunit beta (S20I15) (S20III15) (eIF2B GDP-GTP exchange factor subunit beta)
Protein function Acts as a component of the translation initiation factor 2B (eIF2B) complex, which catalyzes the exchange of GDP for GTP on eukaryotic initiation factor 2 (eIF2) gamma subunit (PubMed:25858979, PubMed:27023709, PubMed:31048492). Its guanine nucl
PDB 6CAJ , 6EZO , 6K71 , 6K72 , 6O81 , 6O85 , 6O9Z , 7D43 , 7D44 , 7D45 , 7D46 , 7F64 , 7F66 , 7F67 , 7KMF , 7L70 , 7L7G , 7RLO , 7TRJ , 7VLK , 8TQO , 8TQZ
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01008 IF-2B 27 333 Initiation factor 2 subunit family Family
Sequence
Sequence length 351
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Herpes simplex virus 1 infection   Recycling of eIF2:GDP
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
114
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Abnormality of the nervous system Likely pathogenic; Pathogenic rs397514648, rs372548739 RCV001814020
RCV001814200
Clear cell carcinoma of kidney Likely pathogenic rs373906805 RCV005917762
EIF2B2-related disorder Pathogenic; Likely pathogenic rs104894425, rs113994012, rs771315757, rs372548739 RCV003904806
RCV003422090
RCV003417036
RCV004755992
Leukoencephalopathy with vanishing white matter 1 Pathogenic rs104894425 RCV004766978
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Acute myeloid leukemia Benign rs201252172 RCV005916854
Lung cancer Benign rs201252172 RCV005916857
Ovarian serous cystadenocarcinoma Benign; Likely benign rs759931855, rs754847169 RCV005925150
RCV005935050
Sarcoma Benign rs201252172, rs371500682, rs71426992 RCV005916855
RCV005915684
RCV005925107
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Arrhythmogenic Right Ventricular Dysplasia Associate 25031760
Ataxia Associate 12707859
Cardiovascular Abnormalities Associate 25031760
Central Nervous System Diseases Associate 12707859
Cerebellar Ataxia Associate 31438897
Developmental Disabilities Associate 26740508
Leukemic Infiltration Associate 25031760
Leukoencephalopathies Associate 12707859, 14993275, 16823698, 25031760, 29632131, 29706645, 31438897, 35897042, 36793200
Mood Disorders Associate 29187730
Nervous System Diseases Associate 12707859