Gene Gene information from NCBI Gene database.
Entrez ID 8777
Gene name Multiple PDZ domain crumbs cell polarity complex component
Gene symbol MPDZ
Synonyms (NCBI Gene)
HYC2MUPP1
Chromosome 9
Chromosome location 9p23
Summary The protein encoded by this gene has multiple PDZ domains, which are hallmarks of protein-protein interactions. The encoded protein is known to interact with the HTR2C receptor and may cause it to clump at the cell surface. Multiple transcript variants en
SNPs SNP information provided by dbSNP.
16
SNP ID Visualize variation Clinical significance Consequence
rs188840960 A>C Conflicting-interpretations-of-pathogenicity Missense variant, coding sequence variant, non coding transcript variant, genic downstream transcript variant
rs368581522 G>A Likely-pathogenic Missense variant, non coding transcript variant, coding sequence variant
rs372127610 G>A Pathogenic Stop gained, non coding transcript variant, coding sequence variant
rs376078512 G>A Pathogenic Stop gained, non coding transcript variant, coding sequence variant
rs777752091 G>A Likely-pathogenic Coding sequence variant, non coding transcript variant, stop gained, genic downstream transcript variant
miRNA miRNA information provided by mirtarbase database.
241
miRTarBase ID miRNA Experiments Reference
MIRT018749 hsa-miR-335-5p Microarray 18185580
MIRT030077 hsa-miR-26b-5p Microarray 19088304
MIRT1155936 hsa-let-7a CLIP-seq
MIRT1155937 hsa-let-7b CLIP-seq
MIRT1155938 hsa-let-7c CLIP-seq
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
18
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 11802782, 15364909, 19071123, 19909339, 22653443
GO:0005737 Component Cytoplasm IBA
GO:0005737 Component Cytoplasm IDA 15364909
GO:0005886 Component Plasma membrane IBA
GO:0005886 Component Plasma membrane IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
603785 7208 ENSG00000107186
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
O75970
Protein name Multiple PDZ domain protein (Multi-PDZ domain protein 1)
Protein function Member of the NMDAR signaling complex that may play a role in control of AMPAR potentiation and synaptic plasticity in excitatory synapses (PubMed:11150294, PubMed:15312654). Promotes clustering of HT2RC at the cell surface (By similarity). {ECO
PDB 2FCF , 2FNE , 2IWN , 2IWO , 2IWP , 2IWQ , 2O2T , 2OPG , 2QG1
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF09045 L27_2 6 63 L27_2 Domain
PF00595 PDZ 137 221 PDZ domain Domain
PF00595 PDZ 257 334 PDZ domain Domain
PF00595 PDZ 376 460 PDZ domain Domain
PF00595 PDZ 554 630 PDZ domain Domain
PF00595 PDZ 700 784 PDZ domain Domain
PF00595 PDZ 1008 1080 PDZ domain Domain
PF00595 PDZ 1151 1240 PDZ domain Domain
PF00595 PDZ 1350 1429 PDZ domain Domain
PF00595 PDZ 1482 1561 PDZ domain Domain
PF16667 MPDZ_u10 1562 1626 Unstructured region 10 on multiple PDZ protein Disordered
PF00595 PDZ 1627 1709 PDZ domain Domain
PF00595 PDZ 1725 1804 PDZ domain Domain
PF00595 PDZ 1862 1945 PDZ domain Domain
PF00595 PDZ 1987 2069 PDZ domain Domain
Tissue specificity TISSUE SPECIFICITY: Expressed in heart, brain, placenta, liver, skeletal muscle, kidney and pancreas. {ECO:0000269|PubMed:9537516}.
Sequence
MLEAIDKNRALHAAERLQTKLRERGDVANEDKLSLLKSVLQSPLFSQILSLQTSVQQLKD
QVN
IATSATSNIEYAHVPHLSPAVIPTLQNESFLLSPNNGNLEALTGPGIPHINGKPACD
EFDQLIKNMAQGRHVEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDG
RLKETDQILAINGQALDQTITHQQAISILQKAKDTVQLVIA
RGSLPQLVSPIVSRSPSAA
STISAHSNPVHWQHMETIELVNDGSGLGFGIIGGKATGVIVKTILPGGVADQHGRLCSGD
HILKIGDTDLAGMSSEQVAQVLRQCGNRVKLMIA
RGAIEERTAPTALGITLSSSPTSTPE
LRVDASTQKGEESETFDVELTKNVQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDG
RIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM
RRGMKQEAELMSREDVTKDA
DLSPVNASIIKENYEKDEDFLSSTRNTNILPTEEEGYPLLSAEIEEIEDAQKQEAALLTK
WQRIMGINYEIVVAHVSKFSENSGLGISLEATVGHHFIRSVLPEGPVGHSGKLFSGDELL
EVNGITLLGENHQDVVNILKELPIEVTMVC
CRRTVPPTTQSELDSLDLCDIELTEKPHVD
LGEFIGSSETEDPVLAMTDAGQSTEEVQAPLAMWEAGIQHIELEKGSKGLGFSILDYQDP
IDPASTVIIIRSLVPGGIAEKDGRLLPGDRLMFVNDVNLENSSLEEAVEALKGAPSGTVR
IGVA
KPLPLSPEEGYVSAKEDSFLYPPHSCEEAGLADKPLFRADLALVGTNDADLVDEST
FESPYSPENDSIYSTQASILSLHGSSCGDGLNYGSSLPSSPPKDVIENSCDPVLDLHMSL
EELYTQNLLQRQDENTPSVDISMGPASGFTINDYTPANAIEQQYECENTIVWTESHLPSE
VISSAELPSVLPDSAGKGSEYLLEQSSLACNAECVMLQNVSKESFERTINIAKGNSSLGM
TVSANKDGLGMIVRSIIHGGAISRDGRIAIGDCILSINEESTISVTNAQARAMLRRHSLI

GPDIKITYVPAEHLEEFKISLGQQSGRVMALDIFSSYTGRDIPELPEREEGEGEESELQN
TAYSNWNQPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNG
TLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQ
SIINRPRKSPLPSLLHNLYP
KYNFSSTNPFADSLQINADKAPSQSESEPEKAPLCSVPPPPPSAFAEMGSDHTQSSASKI
SQDVDKEDEFGYSWKNIRERYGTLTGELHMIELEKGHSGLGLSLAGNKDRSRMSVFIVGI
DPNGAAGKDGRLQIADELLEINGQILYGRSHQNASSIIKCAPSKVKIIF
IRNKDAVNQMA
VCPGNAVEPLPSNSENLQNKETEPTVTTSDAAVDLSSFKNVQHLELPKDQGGLGIAISEE
DTLSGVIIKSLTEHGVAATDGRLKVGDQILAVDDEIVVGYPIEKFISLLKTAKMTVKLTI
H
AENPDSQAVPSAAGAASGEKKNSSQSLMVPQSGSPEPESIRNTSRSSTPAIFASDPATC
PIIPGC
ETTIEISKGRTGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEV
NGIDLRKATHDEAINVLRQTPQRVRLTLY
RDEAPYKEEEVCDTLTIELQKKPGKGLGLSI
VGKRNDTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLGTVT
LEVG
RIKAGPFHSERRPSQSSQVSEGSLSSFTFPLSGSSTSESLESSSKKNALASEIQGL
RTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTS
TEGMTHTQAVNLLKNASGSIEMQVV
AGGDVSVVTGHQQEPASSSLSFTGLTSSSIFQDDL
GPPQCKSITLERGPDGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAV
NGQSLEGVTHEEAVAILKRTKGTVTLMVL
S
Sequence length 2070
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG 
  Tight junction  
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
197
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Hydrocephalus, nonsyndromic, autosomal recessive 2 Pathogenic; Likely pathogenic rs2131610068, rs1950043713, rs775394111, rs2135678282, rs571799365, rs1267168609, rs2131668162, rs770258839, rs751161649, rs2495861105, rs2497668341, rs746360632, rs797045095, rs797045707, rs1161458067
View all (12 more)
RCV001644991
RCV001331120
RCV005635444
RCV001780300
RCV002221632
RCV001784669
RCV005859682
RCV005412313
RCV003146293
RCV002280245
RCV002280246
RCV002289171
RCV000190604
RCV000193063
RCV003445345
RCV003988686
RCV000660885
RCV000660886
RCV000660887
RCV000043475
RCV000991394
RCV001029757
RCV001194638
RCV001194639
RCV001251107
RCV001261561
RCV001283804
MPDZ-related disorder Likely pathogenic; Pathogenic rs775394111, rs2135678282, rs200955619, rs755276577, rs747068627 RCV003426291
RCV004731141
RCV003401914
RCV003898843
RCV003396804
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Autosomal dominant retinitis pigmentosa Uncertain significance rs149265684 RCV005863429
Congenital hydrocephalus Conflicting classifications of pathogenicity rs777752091 RCV000826119
Hepatocellular carcinoma Uncertain significance rs186287156 RCV005926808
Meniere disease Uncertain significance; Likely benign rs149265684, rs772598863, rs772792353, rs767629817, rs2489294386, rs755256638, rs200475640 RCV004570853
RCV004571957
RCV004571939
RCV004571188
RCV004574897
RCV004574898
RCV004569808
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Capillary Malformation Arteriovenous Malformation Associate 28460636
Cerebral Ventricle Neoplasms Associate 40565599
Dermatitis Atopic Associate 39245941
Hearing Loss Associate 34946889
Hydrocephalus Associate 28460636, 29499638, 40565599
Hydrocephalus X linked Associate 36803301
Keratoconus Associate 26040312, 28207827, 35305607
Pain Associate 24275226
Polycythemia Vera Associate 27132877
Pulmonary Atresia Associate 36803301