Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
8575
Gene name Gene Name - the full gene name approved by the HGNC.
Protein activator of interferon induced protein kinase EIF2AK2
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
PRKRA
Synonyms (NCBI Gene) Gene synonyms aliases
DYT16, HSD14, PACT, RAX
Disease Acronyms (UniProt) Disease acronyms from UniProt database
DYT16
Chromosome Chromosome number
2
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
2q31.2
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a protein kinase activated by double-stranded RNA which mediates the effects of interferon in response to viral infection. Mutations in this gene have been associated with dystonia. Alternative splicing results in multiple transcript var
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs730880307 AT>- Pathogenic 5 prime UTR variant, non coding transcript variant, coding sequence variant, frameshift variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT006123 hsa-miR-122-5p Luciferase reporter assay, Microarray, qRT-PCR, Western blot 21937511
MIRT006123 hsa-miR-122-5p Luciferase reporter assay, Microarray, qRT-PCR, Western blot 21937511
MIRT006128 hsa-miR-125b-5p Luciferase reporter assay, qRT-PCR, Western blot 21935352
MIRT006128 hsa-miR-125b-5p Luciferase reporter assay, qRT-PCR, Western blot 21935352
MIRT006123 hsa-miR-122-5p Luciferase reporter assay, Microarray, qRT-PCR, Western blot 21937511
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0003723 Function RNA binding HDA 22681889
GO:0003725 Function Double-stranded RNA binding IDA 23661684
GO:0005515 Function Protein binding IPI 16424907, 17452327, 18096616, 20064372, 21516116, 21858095, 21900206, 21903422, 21994455, 22810585, 23455922, 23661684, 23853584, 23870315, 25416956, 25910212, 28591694, 31515488, 32296183
GO:0005654 Component Nucleoplasm IDA
GO:0005737 Component Cytoplasm IDA 17452327
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
603424 9438 ENSG00000180228
Protein
UniProt ID O75569
Protein name Interferon-inducible double-stranded RNA-dependent protein kinase activator A (PKR-associated protein X) (PKR-associating protein X) (Protein activator of the interferon-induced protein kinase) (Protein kinase, interferon-inducible double-stranded RNA-dep
Protein function Activates EIF2AK2/PKR in the absence of double-stranded RNA (dsRNA), leading to phosphorylation of EIF2S1/EFI2-alpha and inhibition of translation and induction of apoptosis. Required for siRNA production by DICER1 and for subsequent siRNA-media
PDB 2DIX
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00035 dsrm 35 99 Double-stranded RNA binding motif Domain
PF00035 dsrm 127 192 Double-stranded RNA binding motif Domain
PF16482 Staufen_C 218 310 Staufen C-terminal domain Domain
Sequence
Sequence length 313
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    MicroRNA (miRNA) biogenesis
Small interfering RNA (siRNA) biogenesis
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Dermatitis Dermatitis, Atopic rs61816761, rs150597413, rs138726443, rs201356558, rs149484917, rs372754256, rs747301529, rs567795279, rs745915174 25574825
Dystonia Dystonia Disorders, Idiopathic familial dystonia, Adult-Onset Dystonias, Adult-Onset Idiopathic Focal Dystonias, Adult-Onset Idiopathic Torsion Dystonias, Autosomal Dominant Familial Dystonia, Autosomal Recessive Familial Dystonia, Childhood Onset Dystonias, Dystonia, Primary, Dystonia, Secondary, Dystonias, Sporadic, Familial Dystonia, DYSTONIA 16 (disorder), Dystonia 16 rs1586456293, rs1586456350, rs1586456278, rs267607112, rs137852968, rs80358233, rs121434410, rs730880307, rs104894433, rs104894437, rs2140127822, rs104894438, rs2140074226, rs104894439, rs104894440
View all (136 more)
18243799, 26990861, 25142429, 18420150, 25914261, 26231208
Mental retardation Profound Mental Retardation, Mental deficiency, Intellectual Disability rs5742905, rs267607136, rs267607137, rs2131714307, rs267607038, rs267607042, rs80338685, rs137853127, rs80338815, rs28940893, rs387906309, rs121908096, rs121908099, rs587784365, rs121918315
View all (1024 more)
21937992
Multiple sclerosis Multiple Sclerosis rs104895219, rs483353022, rs483353023, rs483353028, rs483353029, rs483353024, rs483353030, rs3207617, rs483353031, rs483353032, rs483353033, rs483353034, rs483353035, rs483353036, rs483353039
View all (4 more)
23472185
Associations from Text Mining
Disease Name Relationship Type References
Asthma Associate 35597955
Carcinoma Hepatocellular Associate 35035655
Colorectal Neoplasms Associate 27107574, 27859935
Dermatitis Atopic Associate 25574825
Dystonia Associate 22842711, 25150291, 26231208, 33049316, 33236446, 35625640
Inflammation Associate 29170442
Lupus Erythematosus Systemic Stimulate 20538795
Multiple Sclerosis Associate 36755464
Myotonic Dystrophy Associate 34520479
Neoplasms Associate 27107574, 33406242