Gene Gene information from NCBI Gene database.
Entrez ID 8573
Gene name Calcium/calmodulin dependent serine protein kinase
Gene symbol CASK
Synonyms (NCBI Gene)
CAGH39CAMGUKCMGFGS4LIN2MICPCHMRXSNATNRC8hCASK
Chromosome X
Chromosome location Xp11.4
Summary This gene encodes a calcium/calmodulin-dependent serine protein kinase. The encoded protein is a MAGUK (membrane-associated guanylate kinase) protein family member. These proteins are scaffold proteins and the encoded protein is located at synapses in the
SNPs SNP information provided by dbSNP.
107
SNP ID Visualize variation Clinical significance Consequence
rs5964007 A>G Conflicting-interpretations-of-pathogenicity Intron variant
rs76106850 C>T Likely-benign, conflicting-interpretations-of-pathogenicity Coding sequence variant, missense variant
rs137852815 G>A Pathogenic Coding sequence variant, stop gained
rs137852816 C>A Pathogenic Coding sequence variant, missense variant, genic upstream transcript variant
rs137852817 A>G Pathogenic Coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
515
miRTarBase ID miRNA Experiments Reference
MIRT031989 hsa-miR-16-5p Proteomics 18668040
MIRT054155 hsa-miR-203a-3p Luciferase reporter assayqRT-PCRWestern blot 25373785
MIRT054155 hsa-miR-203a-3p Luciferase reporter assayqRT-PCRWestern blot 25373785
MIRT508645 hsa-miR-3908 HITS-CLIP 22927820
MIRT508644 hsa-miR-15a-5p HITS-CLIP 22927820
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
58
GO ID Ontology Definition Evidence Reference
GO:0000166 Function Nucleotide binding IEA
GO:0001953 Process Negative regulation of cell-matrix adhesion IMP 18664494
GO:0004385 Function GMP kinase activity IEA
GO:0004385 Function GMP kinase activity TAS 9660868
GO:0004672 Function Protein kinase activity IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
300172 1497 ENSG00000147044
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
O14936
Protein name Peripheral plasma membrane protein CASK (hCASK) (EC 2.7.11.1) (Calcium/calmodulin-dependent serine protein kinase) (Protein lin-2 homolog)
Protein function Multidomain scaffolding Mg(2+)-independent protein kinase that catalyzes the phosphotransfer from ATP to proteins such as NRXN1, and plays a role in synaptic transmembrane protein anchoring and ion channel trafficking (PubMed:18423203). Contribu
PDB 1KGD , 1KWA , 1ZL8 , 3C0G , 3C0H , 3C0I , 3MFR , 3MFS , 3MFT , 3MFU , 3TAC , 6KMH , 7OAI , 7OAJ , 7OAK , 7OAL
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00069 Pkinase 12 276 Protein kinase domain Domain
PF02828 L27 347 400 L27 domain Domain
PF02828 L27 406 457 L27 domain Domain
PF00595 PDZ 490 568 PDZ domain Domain
PF00018 SH3_1 618 674 SH3 domain Domain
PF00625 Guanylate_kin 738 912 Guanylate kinase Domain
Tissue specificity TISSUE SPECIFICITY: Ubiquitous. Expression is significantly greater in brain relative to kidney, lung, and liver and in fetal brain and kidney relative to lung and liver. {ECO:0000269|PubMed:11003712}.
Sequence
MADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK
REASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH
YMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV
GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPR
QWSHISESAKDLVRRMLMLDPAERITVYEALNHPWL
KERDRYAYKIHLPETVEQLRKFNA
RRKLKGAVLAAVSSHKFNSFYGDPPEELPDFSEDPTSSGLLAAERAVSQVLDSLEEIHAL
TDCSEKDLDFLHSVFQDQHLHTLLDLYDKINTKSSPQIRN
PPSDAVQRAKEVLEEISCYP
ENNDAKELKRILTQPHFMALLQTHDVVAHEVYSDEAL
RVTPPPTSPYLNGDSPESANGDM
DMENVTRVRLVQFQKNTDEPMGITLKMNELNHCIVARIMHGGMIHRQGTLHVGDEIREIN
GISVANQTVEQLQKMLREMRGSITFKIV
PSYRTQSSSCERDSPSTSRQSPANGHSSTNNS
VSDLPSTTQPKGRQIYVRAQFEYDPAKDDLIPCKEAGIRFRVGDIIQIISKDDHNWWQGK
LENSKNGTAGLIPS
PELQEWRVACIAMEKTKQEQQASCTWFGKKKKQYKDKYLAKHNAVF
DQLDLVTYEEVVKLPAFKRKTLVLLGAHGVGRRHIKNTLITKHPDRFAYPIPHTTRPPKK
DEENGKNYYFVSHDQMMQDISNNEYLEYGSHEDAMYGTKLETIRKIHEQGLIAILDVEPQ
ALKVLRTAEFAPFVVFIAAPTITPGLNEDESLQRLQKESDILQRTYAHYFDLTIINNEID
ETIRHLEEAVEL
VCTAPQWVPVSWVY
Sequence length 926
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Dopamine Neurotransmitter Release Cycle
Neurexins and neuroligins
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
741
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Abnormality of the nervous system Likely pathogenic; Pathogenic rs1602292076 RCV001814250
Anemia, nonspherocytic hemolytic, due to G6PD deficiency Likely pathogenic; Pathogenic rs2147095645, rs886128077 RCV003883186
RCV000763625
CASK-related disorder Likely pathogenic; Pathogenic rs1114167352, rs2519688140, rs2519772582, rs1064796879, rs1555977269 RCV000844926
RCV004529829
RCV004531607
RCV000509559
RCV000677399
CASK-related intellectual disability and microcephaly with pontine and cerebellar hypoplasia Pathogenic rs2065377688 RCV001270856
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Acute myeloid leukemia Likely benign; Benign rs139933620, rs5918201 RCV005915018
RCV005905647
Cholangiocarcinoma Benign rs199560653, rs5918201 RCV005871494
RCV005905648
Familial cancer of breast Benign rs199560653 RCV005871492
FG syndrome Benign rs199560653 RCV003994715
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Agenesis of Cerebellar Vermis Associate 22452838
Alcohol Related Disorders Associate 32929080
Atrophy Associate 32696595
Autism Spectrum Disorder Associate 24505460, 32929080
Autistic Disorder Associate 20574149, 35281599
Autosomal Recessive Primary Microcephaly Associate 35281599
Body Dysmorphic Disorders Associate 22452838, 32696595
Bone Diseases Metabolic Associate 32696595
Brain Diseases Associate 20574149, 25886057, 32696595, 35550617
Brain Stem Neoplasms Associate 20595373